Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc07g0007700 Simmondsia chinensis HOM05D004030 ORTHO05D004952 1.1e-176 623.2 334 100.0
Hund21166 Selenicereus undatus HOM05D004030 ORTHO05D004952 5.2e-89 332.0 366 58.5
EL10Ac8g20580 Beta vulgaris HOM05D004030 ORTHO05D004952 1.2e-85 320.9 342 58.8
TAR627G0229 Trochodendron aralioides HOM05D004030 ORTHO05D004952 3.3e-83 312.8 348 56.6
Dinv16793 Davidia involucrata HOM05D004030 ORTHO05D004952 9.5e-83 311.2 360 53.6
CANSAT80G0365 Cannabis sativa HOM05D004030 ORTHO05D004952 6.8e-81 305.1 355 54.1
CSS0010331 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 4.1e-78 295.8 238 63.9
GSVIVG01021235001 Vitis vinifera HOM05D004030 ORTHO05D004952 1.2e-77 294.3 273 60.4
Ah.09g233420 Amaranthus hybridus HOM05D004030 ORTHO05D004952 7.8e-77 291.6 287 57.1
CiPaw.09G071100 Carya illinoinensis HOM05D004030 ORTHO05D004952 1.3e-76 290.8 285 57.9
Phvul.009G089700 Phaseolus vulgaris HOM05D004030 ORTHO05D004952 2.3e-76 290.0 345 50.7
Lj6g0006857 Lotus japonicus HOM05D004030 ORTHO05D004952 6.6e-76 288.5 360 52.5
Psat6g163160 Pisum sativum HOM05D004030 ORTHO05D004952 2.5e-75 286.6 342 50.3
Glyma.04G063400 Glycine max HOM05D004030 ORTHO05D004952 7.3e-75 285.0 360 52.2
Prupe.4G063800 Prunus persica HOM05D004030 ORTHO05D004952 2.1e-74 283.5 229 64.2
QL05p048142 Quercus lobata HOM05D004030 ORTHO05D004952 2.8e-74 283.1 287 56.4
arahy.Tifrunner.gnm1.ann1.6TT57W Arachis hypogaea HOM05D004030 ORTHO05D004952 6.2e-74 282.0 242 62.4
AUR62031227 Chenopodium quinoa HOM05D004030 ORTHO05D004952 8.0e-74 281.6 262 61.5
Glyma.06G064600 Glycine max HOM05D004030 ORTHO05D004952 1.8e-73 280.4 351 49.9
VMungo1309G1983 Vigna mungo HOM05D004030 ORTHO05D004952 3.1e-73 279.6 346 50.3
AUR62027698 Chenopodium quinoa HOM05D004030 ORTHO05D004952 4.0e-73 279.3 321 53.6
Rhsim13G0189000 Rhododendron simsii HOM05D004030 ORTHO05D004952 2.0e-72 276.9 282 58.2
Nn3g19533 Nelumbo nucifera HOM05D004030 ORTHO05D004952 2.6e-72 276.6 330 51.8
Medtr1g087790 Medicago truncatula HOM05D004030 ORTHO05D004952 5.8e-72 275.4 346 48.8
Ca_10308_v3 Cicer arietinum L. HOM05D004030 ORTHO05D004952 7.5e-72 275.0 346 49.7
Cfa013812 Carpinus fangiana HOM05D004030 ORTHO05D004952 9.8e-72 274.6 351 52.4
CsaV3_1G033240 Cucumis sativus L. HOM05D004030 ORTHO05D004952 1.3e-71 274.2 364 51.1
Haze_22485 Corylus avellana HOM05D004030 ORTHO05D004952 1.7e-71 273.9 356 49.4
MELO3C002663.2 Cucumis melo HOM05D004030 ORTHO05D004952 1.1e-70 271.2 365 51.2
ClCG03G007580 Citrullus lanatus HOM05D004030 ORTHO05D004952 1.4e-70 270.8 366 50.8
Manes.16G041300 Manihot esculenta HOM05D004030 ORTHO05D004952 1.9e-70 270.4 357 50.1
Lalb_Chr18g0054631 Lupinus albus HOM05D004030 ORTHO05D004952 3.2e-70 269.6 340 50.6
Actinidia16784 Actinidia chinensis HOM05D004030 ORTHO05D004952 9.2e-70 268.1 278 54.7
Aqoxy1G02017 Aquilegia oxysepala HOM05D004030 ORTHO05D004952 1.6e-69 267.3 349 50.1
Cfa000628 Carpinus fangiana HOM05D004030 ORTHO05D004952 3.5e-69 266.2 284 52.8
Oeu043115.1 Olea europaea HOM05D004030 ORTHO05D004952 4.6e-69 265.8 248 59.7
Haze_06204 Corylus avellana HOM05D004030 ORTHO05D004952 7.8e-69 265.0 301 52.2
Sed0004310 Sechium edule HOM05D004030 ORTHO05D004952 2.3e-68 263.5 340 50.9
Migut.M01023 Erythranthe guttata HOM05D004030 ORTHO05D004952 5.0e-68 262.3 340 48.8
Gohir.A10G036100 Gossypium hirsutum HOM05D004030 ORTHO05D004952 1.9e-67 260.4 225 62.7
Ah.16g107150 Amaranthus hybridus HOM05D004030 ORTHO05D004952 5.6e-67 258.8 308 52.9
Thecc.06G168200 Theobroma cacao HOM05D004030 ORTHO05D004952 1.6e-66 257.3 334 51.8
Atru.chr10.1642 Acer truncatum HOM05D004030 ORTHO05D004952 2.8e-66 256.5 331 50.2
arahy.Tifrunner.gnm1.ann1.HYDG6Q Arachis hypogaea HOM05D004030 ORTHO05D004952 2.8e-66 256.5 301 49.8
MBI07_g09555_MAGBIO Magnolia biondii HOM05D004030 ORTHO05D004952 2.8e-66 256.5 369 46.1
PSO782G4674 Papaver somniferum HOM05D004030 ORTHO05D004952 3.6e-66 256.1 345 46.7
Potri.011G068100 Populus trichocarpa HOM05D004030 ORTHO05D004952 3.6e-66 256.1 342 47.7
Nitab4.5_0005171g0040 Nicotiana tabacum HOM05D004030 ORTHO05D004952 6.2e-66 255.4 298 52.0
PSO063G1415 Papaver somniferum HOM05D004030 ORTHO05D004952 6.2e-66 255.4 343 46.6
ECA248G1387 Erigeron canadensis HOM05D004030 ORTHO05D004952 8.1e-66 255.0 347 51.6
Duzib235G1256 Durio zibethinus HOM05D004030 ORTHO05D004952 1.8e-65 253.8 269 55.4
Nitab4.5_0007465g0050 Nicotiana tabacum HOM05D004030 ORTHO05D004952 1.8e-65 253.8 298 52.3
Gohir.D10G036800 Gossypium hirsutum HOM05D004030 ORTHO05D004952 8.9e-65 251.5 347 47.8
Gorai.011G038700 Gossypium raimondii HOM05D004030 ORTHO05D004952 1.2e-64 251.1 348 46.8
Ciclev10015509m.g Citrus clementina HOM05D004030 ORTHO05D004952 2.0e-64 250.4 339 49.3
MD10G1277900 Malus domestica HOM05D004030 ORTHO05D004952 2.0e-64 250.4 344 49.4
SGA_v2.0_scaffold1G00064 Striga asiatica HOM05D004030 ORTHO05D004952 2.0e-64 250.4 377 43.2
arahy.Tifrunner.gnm1.ann1.M207AG Arachis hypogaea HOM05D004030 ORTHO05D004952 2.6e-64 250.0 225 60.0
MD05G1298600 Malus domestica HOM05D004030 ORTHO05D004952 2.6e-64 250.0 336 50.6
Solyc02g072510.3 Solanum lycopersicum HOM05D004030 ORTHO05D004952 4.4e-64 249.2 236 57.6
Eucgr.E02762 Eucalyptus grandis HOM05D004030 ORTHO05D004952 7.5e-64 248.4 273 53.1
RcHm_v2.0_Chr5g0011231 Rosa chinensis HOM05D004030 ORTHO05D004952 4.9e-63 245.7 288 51.0
Sopen02g021480 Solanum pennellii HOM05D004030 ORTHO05D004952 4.9e-63 245.7 365 46.0
PGSC0003DMG400028477 Solanum tuberosum HOM05D004030 ORTHO05D004952 8.3e-63 245.0 365 44.7
Dinv40699 Davidia involucrata HOM05D004030 ORTHO05D004952 2.4e-62 243.4 198 65.2
HanXRQChr11g0350521 Helianthus annuus HOM05D004030 ORTHO05D004952 2.4e-62 243.4 322 49.4
TWI39G0053 Tripterygium wilfordii HOM05D004030 ORTHO05D004952 3.2e-62 243.0 283 50.9
Potri.004G058700 Populus trichocarpa HOM05D004030 ORTHO05D004952 4.1e-62 242.7 342 47.7
FAN11G0126 Fragaria x ananassa HOM05D004030 ORTHO05D004952 1.2e-61 241.1 265 52.5
Peaxi162Scf00302g00311 Petunia axillaris HOM05D004030 ORTHO05D004952 2.1e-61 240.4 227 59.9
FvH4_3g37800 Fragaria vesca HOM05D004030 ORTHO05D004952 4.6e-61 239.2 229 57.2
FAN21G1198 Fragaria x ananassa HOM05D004030 ORTHO05D004952 2.3e-60 236.9 297 48.1
CDE10G0195 Ceratophyllum demersum HOM05D004030 ORTHO05D004952 3.0e-60 236.5 257 51.8
FAN11G3556 Fragaria x ananassa HOM05D004030 ORTHO05D004952 3.0e-60 236.5 257 52.9
FAN25G0294 Fragaria x ananassa HOM05D004030 ORTHO05D004952 3.0e-60 236.5 227 55.5
CAN.G411.88 Capsicum annuum HOM05D004030 ORTHO05D004952 6.6e-60 235.3 236 56.4
FvH4_3g07540 Fragaria vesca HOM05D004030 ORTHO05D004952 8.6e-60 235.0 286 50.3
COL.COLO4_31267 Corchorus olitorius HOM05D004030 ORTHO05D004952 1.5e-59 234.2 331 46.5
Cc02_g15190 Coffea canephora HOM05D004030 ORTHO05D004952 2.8e-58 229.9 258 53.9
Sabra11G0049100 Salix brachista HOM05D004030 ORTHO05D004952 1.2e-56 224.6 352 42.6
arahy.Tifrunner.gnm1.ann1.LWKQ47 Arachis hypogaea HOM05D004030 ORTHO05D004952 1.5e-56 224.2 293 49.5
Os01g0759700 Oryza sativa ssp. japonica HOM05D004030 ORTHO05D004952 1.5e-56 224.2 227 55.1
SalBow8G0896 Salvia bowleyana HOM05D004030 ORTHO05D004952 1.5e-56 224.2 393 41.0
Zm00001eb370530 Zea mays HOM05D004030 ORTHO05D004952 3.4e-56 223.0 228 54.8
Duzib160G0274 Durio zibethinus HOM05D004030 ORTHO05D004952 4.4e-56 222.6 341 46.3
ATR0824G134 Amborella trichopoda HOM05D004030 ORTHO05D004952 5.8e-56 222.2 250 50.4
DCAR_020881 Daucus carota HOM05D004030 ORTHO05D004952 7.6e-56 221.9 370 41.1
DCAR_005202 Daucus carota HOM05D004030 ORTHO05D004952 2.2e-55 220.3 366 41.0
Lalb_Chr15g0086161 Lupinus albus HOM05D004030 ORTHO05D004952 2.4e-54 216.9 296 44.9
SEGI_23147 Sequoiadendron giganteum HOM05D004030 ORTHO05D004952 5.4e-54 215.7 281 45.6
Lsat_1_v5_gn_1_111240 Lactuca sativa HOM05D004030 ORTHO05D004952 7.1e-54 215.3 341 45.2
PGR031G0618 Punica granatum HOM05D004030 ORTHO05D004952 1.2e-53 214.5 180 62.8
arahy.Tifrunner.gnm1.ann1.JIP48Q Arachis hypogaea HOM05D004030 ORTHO05D004952 2.1e-53 213.8 222 53.6
CARHR028550 Cardamine hirsuta HOM05D004030 ORTHO05D004952 4.3e-51 206.1 205 54.1
SalBow5G1441 Salvia bowleyana HOM05D004030 ORTHO05D004952 9.6e-51 204.9 310 46.1
Aa31LG6G6290 Aethionema arabicum HOM05D004030 ORTHO05D004952 1.2e-50 204.5 130 76.9
TWI63G1163 Tripterygium wilfordii HOM05D004030 ORTHO05D004952 1.2e-50 204.5 222 49.5
vmacro03922 Vaccinium macrocarpon HOM05D004030 ORTHO05D004952 2.8e-50 203.4 520 31.0
HPP92_010042 Vanilla planifolia HOM05D004030 ORTHO05D004952 8.1e-50 201.8 232 49.1
AL1G42980 Arabidopsis lyrata HOM05D004030 ORTHO05D004952 1.1e-49 201.4 130 74.6
FAN16G1462 Fragaria x ananassa HOM05D004030 ORTHO05D004952 1.8e-49 200.7 213 54.5
Sp1g25170 Schrenkiella parvula HOM05D004030 ORTHO05D004952 4.0e-49 199.5 130 73.8
THA.LOC104820602 Tarenaya hassleriana HOM05D004030 ORTHO05D004952 6.9e-49 198.7 197 55.3
AT1G29220 Arabidopsis thaliana HOM05D004030 ORTHO05D004952 2.0e-48 197.2 166 62.0
HPP92_021480 Vanilla planifolia HOM05D004030 ORTHO05D004952 3.4e-48 196.4 237 50.2
BcaB07g32509 Brassica carinata HOM05D004030 ORTHO05D004952 4.4e-48 196.1 130 73.8
A09p37120 Brassica napus HOM05D004030 ORTHO05D004952 4.4e-48 196.1 189 57.1
Carub.0001s2743 Capsella rubella HOM05D004030 ORTHO05D004952 4.4e-48 196.1 192 55.7
Manes.17G057500 Manihot esculenta HOM05D004030 ORTHO05D004952 9.9e-48 194.9 197 53.8
BcaC05g26946 Brassica carinata HOM05D004030 ORTHO05D004952 6.4e-47 192.2 210 52.4
C05p27930 Brassica napus HOM05D004030 ORTHO05D004952 6.4e-47 192.2 210 52.4
BraA09t39228Z Brassica rapa HOM05D004030 ORTHO05D004952 7.1e-46 188.7 195 55.4
Thhalv10008084m.g Eutrema salsugineum HOM05D004030 ORTHO05D004952 2.1e-45 187.2 190 54.7
arahy.Tifrunner.gnm1.ann1.G7P63M Arachis hypogaea HOM05D004030 ORTHO05D004952 7.8e-45 185.3 361 39.1
Nn1g02598 Nelumbo nucifera HOM05D004030 ORTHO05D004952 1.0e-44 184.9 187 55.6
BolC5t31519H Brassica oleracea HOM05D004030 ORTHO05D004952 2.3e-44 183.7 226 49.1
TPR.G40724 Trifolium pratense HOM05D004030 ORTHO05D004952 1.1e-43 181.4 116 76.7
Zm00001eb152490 Zea mays HOM05D004030 ORTHO05D004952 1.3e-42 177.9 193 52.3
AagrBONN_evm.TU.Sc2ySwM_362.2754 Anthoceros agrestis HOM05D004030 ORTHO05D004952 3.8e-39 166.4 220 44.1
AagrBONN_evm.TU.Sc2ySwM_344.2041 Anthoceros agrestis HOM05D004030 ORTHO05D004952 1.3e-36 157.9 223 43.0
COL.COLO4_06310 Corchorus olitorius HOM05D004030 ORTHO05D004952 3.3e-35 153.3 183 52.5
Mapoly0022s0014 Marchantia polymorpha HOM05D004030 ORTHO05D004952 6.2e-34 149.1 224 42.9
Sabra04G0038000 Salix brachista HOM05D004030 ORTHO05D004952 6.2e-34 149.1 190 46.3
SHI28530 Sapria himalayana HOM05D004030 ORTHO05D004952 5.3e-33 146.0 119 59.7
SMO266G0004 Selaginella moellendorffii HOM05D004030 ORTHO05D004952 3.8e-31 139.8 225 38.7
Peaxi162Scf00912g00019 Petunia axillaris HOM05D004030 ORTHO05D004952 8.4e-31 138.7 94 73.4
Ah.16g108320 Amaranthus hybridus HOM05D004030 ORTHO05D004952 2.7e-29 133.7 69 88.4
Ah.16g108870 Amaranthus hybridus HOM05D004030 ORTHO05D004952 2.7e-29 133.7 241 42.7
Ah.16g108300 Amaranthus hybridus HOM05D004030 ORTHO05D004952 3.5e-29 133.3 241 42.7
Ah.16g108330 Amaranthus hybridus HOM05D004030 ORTHO05D004952 3.5e-29 133.3 241 42.7
Actinidia35586 Actinidia chinensis HOM05D004030 ORTHO05D004952 4.6e-29 132.9 233 37.3
Lsat_1_v5_gn_6_74880 Lactuca sativa HOM05D004030 ORTHO05D004952 3.9e-28 129.8 125 52.8
Ah.16g108890 Amaranthus hybridus HOM05D004030 ORTHO05D004952 3.3e-27 126.7 256 39.5
CSS0023477 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 1.1e-25 121.7 71 77.5
CSS0003365 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 4.0e-25 119.8 71 76.1
Nitab4.5_0000271g0330 Nicotiana tabacum HOM05D004030 ORTHO05D004952 5.3e-25 119.4 95 62.1
SalBow5G5223 Salvia bowleyana HOM05D004030 ORTHO05D004952 2.6e-24 117.1 70 78.6
CAN.G566.51 Capsicum annuum HOM05D004030 ORTHO05D004952 7.6e-24 115.5 109 56.0
Nitab4.5_0004602g0020 Nicotiana tabacum HOM05D004030 ORTHO05D004952 2.2e-23 114.0 95 58.9
Lj1A1189T62 Lonicera japonica HOM05D004030 ORTHO05D004952 3.8e-23 113.2 70 74.3
BcaB03g13895 Brassica carinata HOM05D004030 ORTHO05D004952 1.4e-22 111.3 88 61.4
SGA_v2.0_scaffold16G07708 Striga asiatica HOM05D004030 ORTHO05D004952 2.5e-22 110.5 102 55.9
Aqoxy2G00428 Aquilegia oxysepala HOM05D004030 ORTHO05D004952 2.5e-19 100.5 69 68.1
CBR_g31948 Chara braunii HOM05D004030 ORTHO05D004952 4.3e-19 99.8 144 39.6
Pp3c22_6900 Physcomitrium patens HOM05D004030 ORTHO05D004952 4.3e-19 99.8 114 43.9
SalBow5G1832 Salvia bowleyana HOM05D004030 ORTHO05D002854 2.4e-17 94.0 240 34.6
SalBow5G5317 Salvia bowleyana HOM05D004030 ORTHO05D004952 1.5e-16 91.3 247 34.0
unitig_899.g15398 Utricularia gibba HOM05D004030 ORTHO05D004952 2.9e-15 87.0 233 28.3
Actinidia37045 Actinidia chinensis HOM05D004030 ORTHO05D004952 2.7e-13 80.5 102 44.1
SalBow5G5526 Salvia bowleyana HOM05D004030 ORTHO05D004952 3.9e-12 76.6 230 34.3
Pp3c21_660 Physcomitrium patens HOM05D004030 ORTHO05D004952 6.7e-12 75.9 194 30.9
MCO08G144 Micromonas commoda HOM05D004030 ORTHO05D004952 9.7e-11 72.0 99 35.4
CSS0043633 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 1.5e-08 64.7 95 46.3
Lj9A197T43 Lonicera japonica HOM05D004030 ORTHO05D004952 1.5e-08 64.7 45 64.4
Cpa.g.sc7.87 Carica papaya HOM05D004030 ORTHO05D004952 4.5e-08 63.2 46 67.4
Cre01.g021750 Chlamydomonas reinhardtii HOM05D004030 ORTHO05D004952 4.5e-08 63.2 135 32.6
CSS0023566 Camellia sinensis var. sinensis HOM05D004030 ORTHO05D004952 5.9e-08 62.8 83 47.0
Cpa.g.sc7.86 Carica papaya HOM05D004030 ORTHO05D033917 1.7e-07 61.2 139 31.7
Lj5g0018916 Lotus japonicus HOM05D004030 ORTHO05D004952 3.8e-07 60.1 107 38.3
SalBow5G0967 Salvia bowleyana HOM05D004030 ORTHO05D004952 3.2e-06 57.0 72 48.6
CDE10G0435 Ceratophyllum demersum HOM05D004030 ORTHO05D004952 4.2e-06 56.6 46 56.5


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