Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc07g0007490 Simmondsia chinensis HOM05D006370 ORTHO05D008324 8.3e-114 413.7 205 100.0
EL10Ac5g11708 Beta vulgaris HOM05D006370 ORTHO05D008324 6.1e-32 141.7 135 56.3
Cfa017718 Carpinus fangiana HOM05D006370 ORTHO05D008324 4.8e-29 132.1 142 52.8
AUR62043361 Chenopodium quinoa HOM05D006370 ORTHO05D008324 1.1e-28 131.0 125 56.8
AUR62042155 Chenopodium quinoa HOM05D006370 ORTHO05D008324 1.2e-27 127.5 125 54.4
Duzib177G0489 Durio zibethinus HOM05D006370 ORTHO05D008324 2.7e-27 126.3 152 50.0
GSVIVG01022435001 Vitis vinifera HOM05D006370 ORTHO05D008324 2.2e-26 123.2 155 43.9
TWI60G1203 Tripterygium wilfordii HOM05D006370 ORTHO05D008324 6.5e-26 121.7 97 60.8
Dinv25046 Davidia involucrata HOM05D006370 ORTHO05D008324 1.9e-25 120.2 103 59.2
Gohir.D11G241500 Gossypium hirsutum HOM05D006370 ORTHO05D008324 1.9e-25 120.2 150 47.3
Gohir.A11G229500 Gossypium hirsutum HOM05D006370 ORTHO05D008324 4.2e-25 119.0 150 47.3
TAR623G1163 Trochodendron aralioides HOM05D006370 ORTHO05D008324 4.2e-25 119.0 131 49.6
COL.COLO4_28633 Corchorus olitorius HOM05D006370 ORTHO05D008324 5.5e-25 118.6 102 59.8
TWI34G0169 Tripterygium wilfordii HOM05D006370 ORTHO05D008324 5.5e-25 118.6 87 66.7
Haze_20411 Corylus avellana HOM05D006370 ORTHO05D008324 7.2e-25 118.2 96 64.6
Thecc.05G242700 Theobroma cacao HOM05D006370 ORTHO05D008324 7.2e-25 118.2 140 49.3
Duzib128G1808 Durio zibethinus HOM05D006370 ORTHO05D008324 9.4e-25 117.9 139 48.2
Manes.09G136900 Manihot esculenta HOM05D006370 ORTHO05D008324 2.1e-24 116.7 138 50.0
ECA248G1067 Erigeron canadensis HOM05D006370 ORTHO05D008324 2.7e-24 116.3 90 60.0
Dinv05555 Davidia involucrata HOM05D006370 ORTHO05D008324 4.7e-24 115.5 103 59.2
MD12G1010600 Malus domestica HOM05D006370 ORTHO05D008324 4.7e-24 115.5 148 47.3
Gorai.007G255600 Gossypium raimondii HOM05D006370 ORTHO05D008324 6.1e-24 115.2 150 45.3
Actinidia37817 Actinidia chinensis HOM05D006370 ORTHO05D008324 8.0e-24 114.8 103 58.3
Lj1A1073T41 Lonicera japonica HOM05D006370 ORTHO05D008324 1.4e-23 114.0 152 46.7
Prupe.7G012600 Prunus persica HOM05D006370 ORTHO05D008324 1.8e-23 113.6 88 64.8
TAR633G0247 Trochodendron aralioides HOM05D001480 ORTHO05D001331 2.3e-23 113.2 73 72.6
MSTRG.6248 Avicennia marina HOM05D006370 ORTHO05D008324 3.0e-23 112.8 143 47.6
Lsat_1_v5_gn_1_55401 Lactuca sativa HOM05D006370 ORTHO05D008324 5.2e-23 112.1 92 57.6
Aqoxy1G00517 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 6.8e-23 111.7 93 60.2
Ciclev10022640m.g Citrus clementina HOM05D006370 ORTHO05D008324 6.8e-23 111.7 118 51.7
Atru.chr2.1510 Acer truncatum HOM05D006370 ORTHO05D008324 2.0e-22 110.2 85 62.4
Sabra13G0056900 Salix brachista HOM05D006370 ORTHO05D008324 2.0e-22 110.2 135 47.4
Hma1.2p1_0526F.1_g172840 Hydrangea macrophylla HOM05D006370 ORTHO05D008324 2.6e-22 109.8 103 54.4
Aqoxy1G00516 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 3.4e-22 109.4 103 57.3
Potri.013G065200 Populus trichocarpa HOM05D006370 ORTHO05D008324 3.4e-22 109.4 121 50.4
FAN26G3131 Fragaria x ananassa HOM05D006370 ORTHO05D008324 4.4e-22 109.0 129 50.4
PSO063G0933 Papaver somniferum HOM05D006370 ORTHO05D008324 4.4e-22 109.0 80 66.2
Sabra13G0057100 Salix brachista HOM05D006370 ORTHO05D008324 5.7e-22 108.6 134 44.8
FvH4_1g28570 Fragaria vesca HOM05D006370 ORTHO05D008324 7.5e-22 108.2 128 49.2
Rhsim03G0049800 Rhododendron simsii HOM05D006370 ORTHO05D008324 7.5e-22 108.2 93 60.2
Cc10_g11540 Coffea canephora HOM05D006370 ORTHO05D008324 9.8e-22 107.8 147 46.3
Nn2g14550 Nelumbo nucifera HOM05D006370 ORTHO05D008324 9.8e-22 107.8 143 44.8
Cpa.g.sc161.33 Carica papaya HOM05D006370 ORTHO05D008324 1.3e-21 107.5 94 60.6
Eucgr.K01528 Eucalyptus grandis HOM05D006370 ORTHO05D008324 1.3e-21 107.5 139 47.5
vmacro07654 Vaccinium macrocarpon HOM05D006370 ORTHO05D008324 1.3e-21 107.5 133 45.1
PSO339G2906 Papaver somniferum HOM05D006370 ORTHO05D008324 1.7e-21 107.1 92 57.6
CANSAT01G3230 Cannabis sativa HOM05D006370 ORTHO05D008324 2.2e-21 106.7 143 44.1
Eucgr.K01533 Eucalyptus grandis HOM05D006370 ORTHO05D008324 2.2e-21 106.7 136 47.1
CiPaw.09G166900 Carya illinoinensis HOM05D006370 ORTHO05D008324 4.8e-21 105.5 136 47.8
HanXRQChr01g0026941 Helianthus annuus HOM05D006370 ORTHO05D008324 6.3e-21 105.1 96 54.2
PGR142G0714 Punica granatum HOM05D006370 ORTHO05D008324 6.3e-21 105.1 140 45.7
Aqoxy1G00515 Aquilegia oxysepala HOM05D006370 ORTHO05D008324 8.3e-21 104.8 73 65.8
CDE10G0041 Ceratophyllum demersum HOM05D002702 ORTHO05D003416 1.1e-20 104.4 123 48.0
CDE10G0775 Ceratophyllum demersum HOM05D006370 ORTHO05D008324 1.1e-20 104.4 134 44.0
RcHm_v2.0_Chr3g0496161 Rosa chinensis HOM05D006370 ORTHO05D008324 1.4e-20 104.0 142 47.2
FAN19G0680 Fragaria x ananassa HOM05D006370 ORTHO05D008324 7.0e-20 101.7 91 58.2
SalBow6G1190 Salvia bowleyana HOM05D006370 ORTHO05D008324 7.0e-20 101.7 148 45.9
Lalb_Chr06g0174141 Lupinus albus HOM05D006370 ORTHO05D008324 1.2e-19 100.9 95 55.8
AT5G37480 Arabidopsis thaliana HOM05D006370 ORTHO05D008324 3.5e-19 99.4 84 59.5
Migut.J01529 Erythranthe guttata HOM05D006370 ORTHO05D008324 7.7e-19 98.2 134 46.3
FAN28G0334 Fragaria x ananassa HOM05D006370 ORTHO05D008324 7.7e-19 98.2 91 57.1
HPP92_022911 Vanilla planifolia HOM05D006370 ORTHO05D008324 1.0e-18 97.8 95 54.7
MD14G1007700 Malus domestica HOM05D006370 ORTHO05D008324 1.7e-18 97.1 124 47.6
THA.LOC104823775 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 3.8e-18 95.9 83 56.6
arahy.Tifrunner.gnm1.ann1.AZ5GA5 Arachis hypogaea HOM05D006370 ORTHO05D008324 5.0e-18 95.5 91 58.2
arahy.Tifrunner.gnm1.ann1.ZL000T Arachis hypogaea HOM05D006370 ORTHO05D008324 5.0e-18 95.5 91 58.2
Aa31LG9G17570 Aethionema arabicum HOM05D006370 ORTHO05D008324 6.5e-18 95.1 82 59.8
A04p10640 Brassica napus HOM05D006370 ORTHO05D008324 6.5e-18 95.1 141 44.0
Zm00001eb057190 Zea mays HOM05D006370 ORTHO05D008324 1.1e-17 94.4 89 52.8
Glyma.19G010300 Glycine max HOM05D006370 ORTHO05D008324 3.2e-17 92.8 71 63.4
Os03g0748600 Oryza sativa ssp. japonica HOM05D006370 ORTHO05D008324 3.2e-17 92.8 75 54.7
SalBow4G2194 Salvia bowleyana HOM05D006370 ORTHO05D008324 3.2e-17 92.8 115 49.6
SalBow6G3000 Salvia bowleyana HOM05D006370 ORTHO05D008324 3.2e-17 92.8 115 49.6
THA.LOC104800075 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 3.2e-17 92.8 80 56.2
THA.LOC104800403 Tarenaya hassleriana HOM05D006370 ORTHO05D008324 3.2e-17 92.8 80 57.5
Sp7g04690 Schrenkiella parvula HOM05D006370 ORTHO05D008324 4.2e-17 92.4 83 56.6
Phvul.004G050600 Phaseolus vulgaris HOM05D006370 ORTHO05D008324 5.5e-17 92.0 111 45.9
BcaB06g27082 Brassica carinata HOM05D006370 ORTHO05D008324 7.2e-17 91.7 141 41.8
Glyma.13G170200 Glycine max HOM05D006370 ORTHO05D008324 7.2e-17 91.7 110 48.2
Medtr6g027600 Medicago truncatula HOM05D006370 ORTHO05D008324 7.2e-17 91.7 99 49.5
CARHR215460 Cardamine hirsuta HOM05D006370 ORTHO05D008324 1.2e-16 90.9 89 55.1
Psat1g089760 Pisum sativum HOM05D006370 ORTHO05D008324 1.6e-16 90.5 76 57.9
BcaC02g09577 Brassica carinata HOM05D006370 ORTHO05D008324 3.6e-16 89.4 133 43.6
BolC4t26007H Brassica oleracea HOM05D006370 ORTHO05D008324 3.6e-16 89.4 133 43.6
unitig_744.g24144 Utricularia gibba HOM05D006370 ORTHO05D000703 4.7e-16 89.0 128 43.8
Thhalv10028111m.g Eutrema salsugineum HOM05D006370 ORTHO05D008324 1.0e-15 87.8 74 59.5
Carub.0007s3265 Capsella rubella HOM05D006370 ORTHO05D008324 1.4e-15 87.4 91 51.6
VMungo0540G0157 Vigna mungo HOM05D006370 ORTHO05D008324 1.8e-15 87.0 79 55.7
SGA_v2.0_scaffold69G23224 Striga asiatica HOM05D006370 ORTHO05D008324 5.2e-15 85.5 145 39.3
Lj2g0006862 Lotus japonicus HOM05D006370 ORTHO05D008324 6.8e-15 85.1 89 51.7
C04p44360 Brassica napus HOM05D006370 ORTHO05D008324 8.8e-15 84.7 132 43.2
SEGI_24903 Sequoiadendron giganteum HOM05D006370 ORTHO05D008324 4.4e-14 82.4 101 42.6
Nitab4.5_0000613g0010 Nicotiana tabacum HOM05D006370 ORTHO05D008324 1.3e-13 80.9 97 44.3
BcaC05g29112 Brassica carinata HOM05D006370 ORTHO05D008324 3.7e-13 79.3 91 50.5
C05p53410 Brassica napus HOM05D006370 ORTHO05D008324 3.7e-13 79.3 81 53.1
BolC5t34010H Brassica oleracea HOM05D006370 ORTHO05D008324 6.3e-13 78.6 81 53.1
BolC5t34018H Brassica oleracea HOM05D006370 ORTHO05D008324 6.3e-13 78.6 81 53.1
Mapoly0007s0154 Marchantia polymorpha HOM05D006370 ORTHO05D008324 2.4e-12 76.6 109 44.0
Nitab4.5_0000387g0020 Nicotiana tabacum HOM05D006370 ORTHO05D008324 4.1e-12 75.9 97 41.2
Sopen10g031990 Solanum pennellii HOM05D006370 ORTHO05D008324 5.4e-12 75.5 152 33.6
Solyc10g081480.2 Solanum lycopersicum HOM05D006370 ORTHO05D008324 1.6e-11 73.9 152 32.2
PGSC0003DMG400028217 Solanum tuberosum HOM05D006370 ORTHO05D008324 2.7e-11 73.2 98 40.8
Mapoly0066s0112 Marchantia polymorpha HOM05D006370 ORTHO05D008324 1.0e-10 71.2 95 41.1
SMO196G0263 Selaginella moellendorffii HOM05D006370 ORTHO05D008324 3.8e-10 69.3 67 53.7
SGA_v2.0_scaffold66G22394 Striga asiatica HOM05D006370 ORTHO05D008324 1.2e-06 57.8 85 42.4
Pp3c22_7490 Physcomitrium patens HOM05D006370 ORTHO05D008324 2.0e-06 57.0 63 44.4
SalBow5G3237 Salvia bowleyana HOM05D006370 ORTHO05D008324 2.6e-06 56.6 46 60.9
Pp3c2_15250 Physcomitrium patens HOM05D006370 ORTHO05D008324 4.4e-06 55.8 63 41.3


User provided reference genes

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