Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc07g0007250 Simmondsia chinensis HOM05D007404 ORTHO05D009281 5.3e-167 590.9 287 100.0
QL07p025963 Quercus lobata HOM05D007404 ORTHO05D009281 2.2e-35 153.7 294 35.4
Cpa.g.sc222.4 Carica papaya HOM05D007404 ORTHO05D009281 3.7e-35 152.9 295 37.3
Thecc.05G182600 Theobroma cacao HOM05D007404 ORTHO05D009281 3.7e-35 152.9 288 36.5
Dinv25087 Davidia involucrata HOM05D007404 ORTHO05D009281 5.3e-34 149.1 288 34.7
Rhsim03G0257900 Rhododendron simsii HOM05D007404 ORTHO05D009281 5.3e-34 149.1 286 36.7
Lj1C1059T6 Lonicera japonica HOM05D007404 ORTHO05D009281 7.0e-34 148.7 252 40.5
Duzib093G1799 Durio zibethinus HOM05D007404 ORTHO05D009281 1.6e-33 147.5 286 37.4
Atru.chr8.1254 Acer truncatum HOM05D007404 ORTHO05D009281 7.7e-33 145.2 262 38.9
Cc06_g07050 Coffea canephora HOM05D007404 ORTHO05D009281 1.3e-32 144.4 252 38.5
Prupe.7G088400 Prunus persica HOM05D007404 ORTHO05D009281 3.8e-32 142.9 289 36.3
CiPaw.10G021900 Carya illinoinensis HOM05D007404 ORTHO05D009281 5.0e-32 142.5 293 34.8
Phvul.001G199200 Phaseolus vulgaris HOM05D007404 ORTHO05D009281 5.0e-32 142.5 280 36.1
Lalb_Chr25g0287801 Lupinus albus HOM05D007404 ORTHO05D009281 6.5e-32 142.1 283 38.2
AUR62036300 Chenopodium quinoa HOM05D007404 ORTHO05D009281 8.5e-32 141.7 281 37.7
CiPaw.09G024800 Carya illinoinensis HOM05D007404 ORTHO05D009281 1.9e-31 140.6 266 38.7
Gorai.002G232900 Gossypium raimondii HOM05D007404 ORTHO05D009281 1.9e-31 140.6 289 35.3
Hma1.2p1_0304F.1_g119261 Hydrangea macrophylla HOM05D007404 ORTHO05D009281 1.9e-31 140.6 252 36.9
AUR62038411 Chenopodium quinoa HOM05D007404 ORTHO05D009281 3.2e-31 139.8 279 38.0
vmacro06064 Vaccinium macrocarpon HOM05D007404 ORTHO05D009281 5.5e-31 139.0 254 37.4
Actinidia03848 Actinidia chinensis HOM05D007404 ORTHO05D009281 7.2e-31 138.7 300 35.0
Glyma.19G203100 Glycine max HOM05D007404 ORTHO05D009281 7.2e-31 138.7 287 33.4
TWI74G0134 Tripterygium wilfordii HOM05D007404 ORTHO05D009281 1.2e-30 137.9 257 36.6
VMungo1383G2609 Vigna mungo HOM05D007404 ORTHO05D009281 1.2e-30 137.9 248 36.7
MD14G1045900 Malus domestica HOM05D007404 ORTHO05D009281 2.1e-30 137.1 257 38.5
Hund10780 Selenicereus undatus HOM05D007404 ORTHO05D009281 2.1e-30 137.1 298 36.6
Eucgr.A02534 Eucalyptus grandis HOM05D007404 ORTHO05D009281 2.7e-30 136.7 250 35.6
Manes.08G038100 Manihot esculenta HOM05D007404 ORTHO05D009281 4.7e-30 136.0 275 34.5
Nitab4.5_0012268g0010 Nicotiana tabacum HOM05D007404 ORTHO05D009281 4.7e-30 136.0 247 36.8
DCAR_013466 Daucus carota HOM05D007404 ORTHO05D009281 6.1e-30 135.6 291 35.1
Potri.006G198500 Populus trichocarpa HOM05D007404 ORTHO05D009281 8.0e-30 135.2 261 37.2
MSTRG.19336 Avicennia marina HOM05D007404 ORTHO05D009281 1.0e-29 134.8 291 33.7
COL.COLO4_29466 Corchorus olitorius HOM05D007404 ORTHO05D009281 1.0e-29 134.8 283 33.9
Ca_09089_v3 Cicer arietinum L. HOM05D007404 ORTHO05D009281 1.4e-29 134.4 258 39.1
Cfa020098 Carpinus fangiana HOM05D007404 ORTHO05D009281 3.0e-29 133.3 256 37.1
Haze_20093 Corylus avellana HOM05D007404 ORTHO05D009281 3.0e-29 133.3 256 36.3
PGSC0003DMG400022875 Solanum tuberosum HOM05D007404 ORTHO05D009281 4.0e-29 132.9 248 35.9
CANSAT64G1742 Cannabis sativa HOM05D007404 ORTHO05D009281 5.2e-29 132.5 285 33.0
MELO3C024593.2 Cucumis melo HOM05D007404 ORTHO05D009281 5.2e-29 132.5 276 33.3
ClCG01G015070 Citrullus lanatus HOM05D007404 ORTHO05D009281 1.2e-28 131.3 288 33.0
CsaV3_6G041180 Cucumis sativus L. HOM05D007404 ORTHO05D009281 1.2e-28 131.3 275 33.5
Gohir.A01G199200 Gossypium hirsutum HOM05D007404 ORTHO05D009281 1.2e-28 131.3 289 33.9
Nitab4.5_0000117g0060 Nicotiana tabacum HOM05D007404 ORTHO05D009281 1.2e-28 131.3 284 33.5
Lj1g0004547 Lotus japonicus HOM05D007404 ORTHO05D009281 1.5e-28 131.0 296 35.1
Ciclev10012555m.g Citrus clementina HOM05D007404 ORTHO05D009281 2.0e-28 130.6 273 34.4
Sopen11g020730 Solanum pennellii HOM05D007404 ORTHO05D009281 5.7e-28 129.0 246 36.2
Glyma.03G205600 Glycine max HOM05D007404 ORTHO05D009281 7.5e-28 128.6 290 33.1
Oeu063091.1 Olea europaea HOM05D007404 ORTHO05D009281 9.8e-28 128.3 253 36.4
Medtr7g107080 Medicago truncatula HOM05D007404 ORTHO05D009281 2.2e-27 127.1 267 37.8
Solyc11g045270.3 Solanum lycopersicum HOM05D007404 ORTHO05D009281 2.2e-27 127.1 248 35.1
Sabra06G0152600 Salix brachista HOM05D007404 ORTHO05D009281 2.8e-27 126.7 286 35.3
TPR.G14403 Trifolium pratense HOM05D007404 ORTHO05D009281 2.8e-27 126.7 264 36.0
Aqoxy1G00574 Aquilegia oxysepala HOM05D007404 ORTHO05D009281 3.7e-27 126.3 253 36.0
Peaxi162Scf00211g00002 Petunia axillaris HOM05D007404 ORTHO05D009281 3.7e-27 126.3 247 36.0
RcHm_v2.0_Chr3g0477561 Rosa chinensis HOM05D007404 ORTHO05D009281 4.8e-27 125.9 255 32.9
FAN14G5090 Fragaria x ananassa HOM05D007404 ORTHO05D009281 4.1e-26 122.9 250 37.2
Migut.J00747 Erythranthe guttata HOM05D007404 ORTHO05D009281 5.4e-26 122.5 246 34.6
Actinidia03958 Actinidia chinensis HOM05D007404 ORTHO05D009281 9.1e-26 121.7 90 66.7
FAN05G3976 Fragaria x ananassa HOM05D007404 ORTHO05D009281 9.1e-26 121.7 248 34.7
Gohir.D01G189300 Gossypium hirsutum HOM05D007404 ORTHO05D009281 1.6e-25 120.9 288 30.6
CAN.G13.10 Capsicum annuum HOM05D007404 ORTHO05D009281 2.7e-25 120.2 264 33.3
FvH4_6g21130 Fragaria vesca HOM05D007404 ORTHO05D009281 3.5e-25 119.8 255 35.3
FAN09G0350 Fragaria x ananassa HOM05D007404 ORTHO05D009281 4.5e-25 119.4 248 36.3
Psat3g026720 Pisum sativum HOM05D007404 ORTHO05D009281 4.5e-25 119.4 253 34.4
TAR623G1670 Trochodendron aralioides HOM05D007404 ORTHO05D009281 4.5e-25 119.4 289 35.6
arahy.Tifrunner.gnm1.ann1.T424Z8 Arachis hypogaea HOM05D007404 ORTHO05D009281 1.7e-24 117.5 115 54.8
MBI14_g28309_MAGBIO Magnolia biondii HOM05D007404 ORTHO05D009281 1.7e-24 117.5 312 32.1
FAN02G0840 Fragaria x ananassa HOM05D007404 ORTHO05D009281 2.3e-24 117.1 257 37.0
PGR004G0377 Punica granatum HOM05D007404 ORTHO05D009281 5.0e-24 115.9 250 35.2
Sed0004973 Sechium edule HOM05D007404 ORTHO05D009281 6.6e-24 115.5 269 33.5
EL10Ac5g11794 Beta vulgaris HOM05D007404 ORTHO05D009281 1.9e-23 114.0 296 32.8
Lsat_1_v5_gn_2_102100 Lactuca sativa HOM05D007404 ORTHO05D009281 2.5e-23 113.6 241 35.7
THA.LOC104826786 Tarenaya hassleriana HOM05D007404 ORTHO05D009281 5.5e-23 112.5 286 30.1
Nn2g14441 Nelumbo nucifera HOM05D007404 ORTHO05D009281 7.2e-23 112.1 300 33.3
ECA238G2201 Erigeron canadensis HOM05D007404 ORTHO05D009281 9.5e-23 111.7 244 35.2
Nn2g14440 Nelumbo nucifera HOM05D007404 ORTHO05D009281 2.1e-22 110.5 265 35.5
ATR0686G215 Amborella trichopoda HOM05D007404 ORTHO05D009281 3.6e-22 109.8 323 31.3
SGA_v2.0_scaffold112G31676 Striga asiatica HOM05D007404 ORTHO05D009281 1.4e-21 107.8 95 55.8
Ah.02g113930 Amaranthus hybridus HOM05D007404 ORTHO05D009281 1.8e-21 107.5 298 31.9
HanXRQChr14g0453181 Helianthus annuus HOM05D007404 ORTHO05D009281 5.7e-20 102.4 107 55.1
unitig_26.g9157 Utricularia gibba HOM05D000495 ORTHO05D009281 3.7e-19 99.8 266 31.2
BcaB06g25568 Brassica carinata HOM05D007404 ORTHO05D009281 4.9e-19 99.4 129 44.2
Sp3g10090 Schrenkiella parvula HOM05D007404 ORTHO05D009281 6.3e-19 99.0 89 55.1
BcaC05g29316 Brassica carinata HOM05D007404 ORTHO05D009281 3.2e-18 96.7 89 53.9
A05p37490 Brassica napus HOM05D007404 ORTHO05D009281 3.2e-18 96.7 89 53.9
C05p56050 Brassica napus HOM05D007404 ORTHO05D009281 3.2e-18 96.7 89 53.9
BolC5t34272H Brassica oleracea HOM05D007404 ORTHO05D009281 3.2e-18 96.7 89 53.9
BraA05t22547Z Brassica rapa HOM05D007404 ORTHO05D009281 3.2e-18 96.7 89 53.9
CARHR086420 Cardamine hirsuta HOM05D007404 ORTHO05D009281 4.1e-18 96.3 89 56.2
Thhalv10020684m.g Eutrema salsugineum HOM05D007404 ORTHO05D009281 4.1e-18 96.3 89 53.9
AT3G11890 Arabidopsis thaliana HOM05D007404 ORTHO05D009281 5.4e-18 95.9 89 53.9
Carub.0003s1121 Capsella rubella HOM05D007404 ORTHO05D009281 7.0e-18 95.5 89 52.8
Aa31LG3G5700 Aethionema arabicum HOM05D007404 ORTHO05D009281 1.2e-17 94.7 94 47.9
Dinv11908 Davidia involucrata HOM05D007404 ORTHO05D009281 1.6e-17 94.4 235 31.5
Zm00001eb170760 Zea mays HOM05D007404 ORTHO05D009281 6.6e-16 89.0 250 33.2
HPP92_023288 Vanilla planifolia HOM05D007404 ORTHO05D009281 3.3e-15 86.7 83 51.8
Os08g0378800 Oryza sativa ssp. japonica HOM05D007404 ORTHO05D009281 5.6e-15 85.9 91 47.3
SEGI_39351 Sequoiadendron giganteum HOM05D007404 ORTHO05D009281 8.0e-14 82.0 88 50.0
CDE09G0274 Ceratophyllum demersum HOM05D007404 ORTHO05D009281 8.3e-11 72.0 243 27.6
Mapoly0022s0106 Marchantia polymorpha HOM05D007404 ORTHO05D009281 1.5e-07 61.2 70 42.9
GSVIVG01022504001 Vitis vinifera HOM05D007404 ORTHO05D009281 4.7e-06 56.2 64 42.2


User provided reference genes

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