Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc07g0006280 Simmondsia chinensis HOM05D009209 ORTHO05D011057 1.7e-105 386.0 190 100.0
Sc06g0006480 Simmondsia chinensis HOM05D038071 ORTHO05D011057 3.6e-18 95.9 91 61.5
Sc07g0006130 Simmondsia chinensis HOM05D009209 ORTHO05D009629 2.5e-11 73.2 81 44.4
Sc10g0004010 Simmondsia chinensis HOM05D031748 ORTHO05D011057 5.5e-11 72.0 63 57.1
Sc14g0003540 Simmondsia chinensis HOM05D009209 ORTHO05D011057 2.1e-10 70.1 87 39.1
Ah.07g201540 Amaranthus hybridus HOM05D008762 ORTHO05D011252 3.6e-10 69.3 93 38.7
Ah.12g063050 Amaranthus hybridus HOM05D000030 ORTHO05D000009 6.1e-10 68.6 134 33.6
Sc15g0003590 Simmondsia chinensis HOM05D009209 ORTHO05D011057 1.4e-09 67.4 107 35.5
CSS0012554 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 5.1e-09 65.5 97 41.2
vmacro12730 Vaccinium macrocarpon HOM05D002015 ORTHO05D011057 1.5e-08 63.9 92 39.1
Ah.10g026690 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.0e-08 63.5 106 34.0
Sc08g0004120 Simmondsia chinensis HOM05D009209 ORTHO05D388301 5.7e-08 62.0 86 44.2
Sc13g0007280 Simmondsia chinensis HOM05D009209 ORTHO05D011057 2.2e-07 60.1 63 41.3
Sc23g0004170 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.7e-07 59.3 85 36.5
Ah.16g108500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 4.8e-07 58.9 81 38.3
Sc15g0002150 Simmondsia chinensis HOM05D009209 ORTHO05D011057 6.3e-07 58.5 159 25.8
Ah.08g219500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 8.2e-07 58.2 121 31.4
Phvul.008G144313 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 8.2e-07 58.2 135 27.4
Sc14g0005700 Simmondsia chinensis HOM05D009209 ORTHO05D011057 8.2e-07 58.2 49 53.1
Sc12g0008180 Simmondsia chinensis HOM05D054718 ORTHO05D388390 1.1e-06 57.8 124 33.1
Lj4g0013144 Lotus japonicus HOM05D008220 ORTHO05D010358 1.4e-06 57.4 142 27.5
Ah.05g173090 Amaranthus hybridus HOM05D008762 ORTHO05D011252 1.8e-06 57.0 64 46.9
Actinidia04023 Actinidia chinensis HOM05D012898 ORTHO05D011057 5.3e-06 55.5 78 39.7
Lj3g0027860 Lotus japonicus HOM05D008220 ORTHO05D010358 5.3e-06 55.5 98 32.7
LjContig00127g0011774 Lotus japonicus HOM05D008220 ORTHO05D010358 5.3e-06 55.5 98 32.7
Sc13g0005400 Simmondsia chinensis HOM05D006933 ORTHO05D009629 9.1e-06 54.7 75 34.7


User provided reference genes

Program Settings