Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc07g0006130 Simmondsia chinensis HOM05D009209 ORTHO05D009629 4.0e-69 264.6 132 100.0
Sc03g0004030 Simmondsia chinensis HOM05D009209 ORTHO05D011705 2.7e-33 145.6 100 70.0
Sc03g0004050 Simmondsia chinensis HOM05D009209 ORTHO05D011705 2.7e-33 145.6 100 70.0
Sc15g0003590 Simmondsia chinensis HOM05D009209 ORTHO05D011057 2.2e-27 125.9 86 72.1
Sc13g0007280 Simmondsia chinensis HOM05D009209 ORTHO05D011057 7.9e-25 117.5 98 62.2
Sc14g0003540 Simmondsia chinensis HOM05D009209 ORTHO05D011057 2.5e-18 95.9 105 45.7
Sc04g0002380 Simmondsia chinensis HOM05D009209 ORTHO05D011057 1.6e-12 76.6 105 39.0
Sc10g0004010 Simmondsia chinensis HOM05D031748 ORTHO05D011057 5.9e-12 74.7 64 56.2
Sc07g0006280 Simmondsia chinensis HOM05D009209 ORTHO05D011057 2.2e-11 72.8 81 44.4
Sc15g0002150 Simmondsia chinensis HOM05D009209 ORTHO05D011057 2.2e-11 72.8 77 42.9
Sc17g0002300 Simmondsia chinensis HOM05D009209 ORTHO05D011705 5.0e-11 71.6 52 67.3
Sc17g0002350 Simmondsia chinensis HOM05D009209 ORTHO05D011705 5.0e-11 71.6 52 67.3
vmacro12730 Vaccinium macrocarpon HOM05D002015 ORTHO05D011057 1.5e-10 70.1 95 36.8
Sc24g0004230 Simmondsia chinensis HOM05D009348 ORTHO05D010856 1.6e-09 66.6 92 35.9
vmacro11531 Vaccinium macrocarpon HOM05D010265 ORTHO05D009356 1.6e-09 66.6 85 37.6
Sc06g0006480 Simmondsia chinensis HOM05D038071 ORTHO05D011057 4.7e-09 65.1 67 49.3
Actinidia12169 Actinidia chinensis HOM05D012898 ORTHO05D009356 6.1e-09 64.7 81 34.6
Ah.16g108500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 6.1e-09 64.7 101 34.7
Actinidia04023 Actinidia chinensis HOM05D012898 ORTHO05D011057 8.0e-09 64.3 125 36.0
Actinidia23250 Actinidia chinensis HOM05D012898 ORTHO05D009356 8.0e-09 64.3 81 34.6
Sc01g0006920 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.0e-08 63.9 94 36.2
Sc02g0004050 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.4e-08 63.5 103 35.0
Sc09g0002060 Simmondsia chinensis HOM05D009348 ORTHO05D010856 1.8e-08 63.2 124 31.5
Actinidia11796 Actinidia chinensis HOM05D002604 ORTHO05D009356 2.3e-08 62.8 80 36.2
Ah.12g063050 Amaranthus hybridus HOM05D000030 ORTHO05D000009 3.0e-08 62.4 84 40.5
Sc06g0006000 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.0e-08 62.4 73 37.0
Sc17g0002240 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.0e-08 62.4 82 41.5
CSS0018658 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 4.0e-08 62.0 110 35.5
Sc03g0004550 Simmondsia chinensis HOM05D009209 ORTHO05D011705 4.0e-08 62.0 44 68.2
Sc23g0004170 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.0e-08 62.0 137 32.1
Sc26g0001380 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.0e-08 62.0 113 33.6
Ah.15g100500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 5.2e-08 61.6 94 36.2
Rhsim13G0125400 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.2e-08 61.6 115 33.9
Sc14g0002520 Simmondsia chinensis HOM05D009209 ORTHO05D011705 5.2e-08 61.6 66 54.5
vmacro00634 Vaccinium macrocarpon HOM05D000516 ORTHO05D000409 5.2e-08 61.6 85 37.6
Lj4g0019865 Lotus japonicus HOM05D019244 ORTHO05D036501 6.7e-08 61.2 78 38.5
Actinidia24024 Actinidia chinensis HOM05D023450 ORTHO05D023249 1.2e-07 60.5 95 37.9
Sc26g0003190 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.2e-07 60.5 112 31.2
Ah.08g221330 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.0e-07 59.7 80 35.0
Rhsim09G0042800 Rhododendron simsii HOM05D017214 ORTHO05D018100 2.0e-07 59.7 122 34.4
RhsimUnG0101100 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.0e-07 59.7 85 36.5
CSS0012554 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 2.6e-07 59.3 103 33.0
Duzib170G0053 Durio zibethinus HOM05D037386 ORTHO05D035091 2.6e-07 59.3 123 33.3
Sc23g0004070 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.6e-07 59.3 80 37.5
Sc17g0003640 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.3e-07 58.9 69 39.1
Sc12g0005710 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.4e-07 58.5 94 37.2
Rhsim05G0075400 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.7e-07 58.2 115 33.0
Sc02g0003510 Simmondsia chinensis HOM05D009348 ORTHO05D010856 9.7e-07 57.4 98 35.7
Sc05g0005650 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.3e-06 57.0 88 37.5
Sc14g0005700 Simmondsia chinensis HOM05D009209 ORTHO05D011057 1.7e-06 56.6 50 50.0
Actinidia34556 Actinidia chinensis HOM05D008219 ORTHO05D009356 2.2e-06 56.2 98 31.6
Sc18g0002450 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.2e-06 56.2 89 33.7
Sc22g0002690 Simmondsia chinensis HOM05D000043 ORTHO05D030613 2.2e-06 56.2 91 37.4
vmacro17834 Vaccinium macrocarpon HOM05D000412 ORTHO05D002774 2.2e-06 56.2 81 34.6
Gohir.A10G205900 Gossypium hirsutum HOM05D000003 ORTHO05D000006 2.8e-06 55.8 86 39.5
vmacro12740 Vaccinium macrocarpon HOM05D000625 ORTHO05D000467 2.8e-06 55.8 94 35.1
Ah.03g145270 Amaranthus hybridus HOM05D008762 ORTHO05D011252 3.7e-06 55.5 108 33.3
Sc18g0000360 Simmondsia chinensis HOM05D009348 ORTHO05D030613 3.7e-06 55.5 80 40.0
Ah.02g117550 Amaranthus hybridus HOM05D008762 ORTHO05D011252 4.8e-06 55.1 109 30.3
Ah.11g040120 Amaranthus hybridus HOM05D008762 ORTHO05D011252 4.8e-06 55.1 92 31.5
EL10Ac5g10790 Beta vulgaris HOM05D008976 ORTHO05D011121 4.8e-06 55.1 87 32.2
Sc16g0005360 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.8e-06 55.1 63 39.7
Rhsim01G0127900 Rhododendron simsii HOM05D008219 ORTHO05D009356 6.3e-06 54.7 64 39.1
Sc08g0005990 Simmondsia chinensis HOM05D006933 ORTHO05D009629 6.3e-06 54.7 68 35.3
Sc03g0005750 Simmondsia chinensis HOM05D009348 ORTHO05D011705 8.2e-06 54.3 126 31.0
Sc19g0006300 Simmondsia chinensis HOM05D006933 ORTHO05D009629 8.2e-06 54.3 94 31.9


User provided reference genes

Program Settings