Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc07g0005960 Simmondsia chinensis HOM05D006410 ORTHO05D007914 1.9e-182 642.5 356 100.0
TAR633G1493 Trochodendron aralioides HOM05D006410 ORTHO05D007914 5.4e-68 262.3 325 51.4
vmacro20378 Vaccinium macrocarpon HOM05D006410 ORTHO05D007914 1.2e-67 261.2 326 50.3
Prupe.6G295400 Prunus persica HOM05D006410 ORTHO05D007914 3.0e-66 256.5 274 55.8
ECA247G0827 Erigeron canadensis HOM05D006410 ORTHO05D007914 5.0e-66 255.8 198 69.2
Haze_22079 Corylus avellana HOM05D006410 ORTHO05D007914 1.5e-65 254.2 210 64.3
Dinv16966 Davidia involucrata HOM05D006410 ORTHO05D007914 2.5e-65 253.4 170 76.5
QL07p031892 Quercus lobata HOM05D006410 ORTHO05D007914 2.5e-65 253.4 196 67.3
Glyma.09G273700 Glycine max HOM05D006410 ORTHO05D007914 5.6e-65 252.3 177 75.1
Lsat_1_v5_gn_9_39501 Lactuca sativa HOM05D006410 ORTHO05D007914 1.2e-64 251.1 271 53.5
GSVIVG01030169001 Vitis vinifera HOM05D006410 ORTHO05D007914 1.2e-64 251.1 194 69.6
Atru.chr8.91 Acer truncatum HOM05D006410 ORTHO05D007914 1.6e-64 250.8 212 64.2
Manes.09G123200 Manihot esculenta HOM05D006410 ORTHO05D007914 2.8e-64 250.0 280 55.0
Cfa013491 Carpinus fangiana HOM05D006410 ORTHO05D007914 3.6e-64 249.6 271 55.4
Hund19754 Selenicereus undatus HOM05D006410 ORTHO05D007914 3.6e-64 249.6 295 53.9
Glyma.18G212900 Glycine max HOM05D006410 ORTHO05D007914 4.7e-64 249.2 267 56.2
Phvul.008G081500 Phaseolus vulgaris HOM05D006410 ORTHO05D007914 1.0e-63 248.1 177 72.3
Rhsim05G0231700 Rhododendron simsii HOM05D006410 ORTHO05D007914 1.0e-63 248.1 198 68.2
Medtr7g073510 Medicago truncatula HOM05D006410 ORTHO05D007914 3.1e-63 246.5 198 67.2
Ciclev10012138m.g Citrus clementina HOM05D006410 ORTHO05D007914 5.2e-63 245.7 174 72.4
HanXRQChr15g0464751 Helianthus annuus HOM05D006410 ORTHO05D007914 8.9e-63 245.0 196 66.3
Psat3g118640 Pisum sativum HOM05D006410 ORTHO05D007914 8.9e-63 245.0 217 63.1
Solyc10g085690.2 Solanum lycopersicum HOM05D006410 ORTHO05D007914 2.0e-62 243.8 194 67.0
Sopen10g035110 Solanum pennellii HOM05D006410 ORTHO05D007914 2.0e-62 243.8 194 67.0
ClCG04G006320 Citrullus lanatus HOM05D006410 ORTHO05D007914 3.4e-62 243.0 215 64.2
Sabra06G0085200 Salix brachista HOM05D006410 ORTHO05D007914 3.4e-62 243.0 197 65.5
CiPaw.10G165500 Carya illinoinensis HOM05D006410 ORTHO05D007914 5.8e-62 242.3 206 63.1
COL.COLO4_03931 Corchorus olitorius HOM05D006410 ORTHO05D007914 5.8e-62 242.3 194 67.5
VMungo1383G1039 Vigna mungo HOM05D006410 ORTHO05D007914 5.8e-62 242.3 271 55.7
TWI77G0542 Tripterygium wilfordii HOM05D006410 ORTHO05D007914 7.5e-62 241.9 185 68.6
arahy.Tifrunner.gnm1.ann1.LV5WBC Arachis hypogaea HOM05D006410 ORTHO05D007914 9.8e-62 241.5 199 64.8
CsaV3_4G027230 Cucumis sativus L. HOM05D006410 ORTHO05D007914 9.8e-62 241.5 215 63.3
Gohir.A02G002700 Gossypium hirsutum HOM05D006410 ORTHO05D007914 9.8e-62 241.5 210 61.9
Potri.006G109500 Populus trichocarpa HOM05D006410 ORTHO05D007914 9.8e-62 241.5 196 65.3
PGR004G0643 Punica granatum HOM05D006410 ORTHO05D007914 9.8e-62 241.5 195 66.7
Gorai.005G003500 Gossypium raimondii HOM05D006410 ORTHO05D007914 1.3e-61 241.1 210 61.4
arahy.Tifrunner.gnm1.ann1.K0FU58 Arachis hypogaea HOM05D006410 ORTHO05D007914 1.7e-61 240.7 199 65.3
Gohir.D02G003000 Gossypium hirsutum HOM05D006410 ORTHO05D007914 2.2e-61 240.4 208 62.0
Duzib212G0115 Durio zibethinus HOM05D006410 ORTHO05D007914 2.9e-61 240.0 213 62.9
TPR.G24331 Trifolium pratense HOM05D006410 ORTHO05D007914 3.7e-61 239.6 280 52.9
Lalb_Chr03g0043841 Lupinus albus HOM05D006410 ORTHO05D007914 6.4e-61 238.8 220 59.1
PSO339G1476 Papaver somniferum HOM05D006410 ORTHO05D007914 1.1e-60 238.0 219 58.9
Peaxi162Scf00146g01120 Petunia axillaris HOM05D006410 ORTHO05D007914 1.9e-60 237.3 174 70.7
Cc06_g00300 Coffea canephora HOM05D006410 ORTHO05D007914 4.1e-60 236.1 166 74.1
Eucgr.J00376 Eucalyptus grandis HOM05D006410 ORTHO05D007914 7.0e-60 235.3 197 64.0
Nitab4.5_0009611g0010 Nicotiana tabacum HOM05D006410 ORTHO05D007914 7.0e-60 235.3 322 46.3
CAN.G1018.3 Capsicum annuum HOM05D006410 ORTHO05D007914 9.2e-60 235.0 174 69.0
AUR62029781 Chenopodium quinoa HOM05D006410 ORTHO05D007914 9.2e-60 235.0 301 49.8
MD12G1190300 Malus domestica HOM05D006410 ORTHO05D007914 1.2e-59 234.6 272 54.8
Thecc.04G150000 Theobroma cacao HOM05D006410 ORTHO05D007914 1.2e-59 234.6 209 60.3
Eucgr.A00566 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.6e-59 234.2 167 71.9
Aqoxy4G03284 Aquilegia oxysepala HOM05D006410 ORTHO05D007914 2.7e-59 233.4 214 57.5
MD04G1175900 Malus domestica HOM05D006410 ORTHO05D007914 2.7e-59 233.4 272 54.4
Actinidia20795 Actinidia chinensis HOM05D006410 ORTHO05D007914 3.5e-59 233.0 163 73.0
Eucgr.G01626 Eucalyptus grandis HOM05D006410 ORTHO05D007914 3.5e-59 233.0 197 63.5
FAN09G0831 Fragaria x ananassa HOM05D006410 ORTHO05D007914 3.5e-59 233.0 186 68.3
FvH4_6g09660 Fragaria vesca HOM05D006410 ORTHO05D007914 4.6e-59 232.6 186 67.7
FAN14G0316 Fragaria x ananassa HOM05D006410 ORTHO05D007914 4.6e-59 232.6 186 67.7
Eucgr.G00130 Eucalyptus grandis HOM05D006410 ORTHO05D007914 6.0e-59 232.3 197 63.5
RcHm_v2.0_Chr3g0460291 Rosa chinensis HOM05D006410 ORTHO05D007914 6.0e-59 232.3 285 50.9
THA.LOC104806212 Tarenaya hassleriana HOM05D006410 ORTHO05D007914 6.0e-59 232.3 223 59.6
FAN05G4204 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.3e-58 231.1 186 67.2
PSO384G4459 Papaver somniferum HOM05D006410 ORTHO05D007914 1.3e-58 231.1 203 60.6
Hma1.2p1_0537F.1_g174300 Hydrangea macrophylla HOM05D006410 ORTHO05D007914 1.7e-58 230.7 168 70.2
Nn2g10260 Nelumbo nucifera HOM05D006410 ORTHO05D007914 3.0e-58 229.9 349 45.0
FAN02G1808 Fragaria x ananassa HOM05D006410 ORTHO05D007914 5.0e-58 229.2 186 66.7
EL10Ac7g17116 Beta vulgaris HOM05D006410 ORTHO05D007914 6.6e-58 228.8 166 71.7
Lj1g0017463 Lotus japonicus HOM05D006410 ORTHO05D007914 6.6e-58 228.8 278 50.7
CDE04G0338 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 8.6e-58 228.4 174 64.9
Eucgr.K01292 Eucalyptus grandis HOM05D006410 ORTHO05D007914 8.6e-58 228.4 197 62.4
Eucgr.H04867 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.1e-57 228.0 163 71.8
CARHR133250 Cardamine hirsuta HOM05D006410 ORTHO05D007914 1.5e-57 227.6 192 65.1
Thhalv10017800m.g Eutrema salsugineum HOM05D006410 ORTHO05D007914 3.3e-57 226.5 218 61.0
Carub.0004s2056 Capsella rubella HOM05D006410 ORTHO05D007914 7.3e-57 225.3 188 63.8
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 2.1e-56 223.8 191 63.9
arahy.Tifrunner.gnm1.ann1.2Y9ZDG Arachis hypogaea HOM05D006410 ORTHO05D007914 2.8e-56 223.4 190 63.7
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 2.8e-56 223.4 217 59.9
AL4G35850 Arabidopsis lyrata HOM05D006410 ORTHO05D007914 3.6e-56 223.0 188 64.9
ATR1127G206 Amborella trichopoda HOM05D006410 ORTHO05D007914 4.7e-56 222.6 180 63.3
SalBow5G5142 Salvia bowleyana HOM05D006410 ORTHO05D007914 4.7e-56 222.6 221 56.1
Nitab4.5_0000381g0170 Nicotiana tabacum HOM05D006410 ORTHO05D007914 8.9e-55 218.4 208 58.2
AT2G38570 Arabidopsis thaliana HOM05D006410 ORTHO05D007914 1.2e-54 218.0 188 63.3
HPP92_026801 Vanilla planifolia HOM05D006410 ORTHO05D007914 2.0e-54 217.2 167 65.9
HPP92_000776 Vanilla planifolia HOM05D006410 ORTHO05D007914 4.4e-54 216.1 167 65.3
MSTRG.5489 Avicennia marina HOM05D006410 ORTHO05D007914 5.8e-54 215.7 176 61.9
BcaB01g03675 Brassica carinata HOM05D006410 ORTHO05D007914 5.8e-54 215.7 213 58.7
Sp4g20910 Schrenkiella parvula HOM05D006410 ORTHO05D007914 2.9e-53 213.4 166 66.9
BraA03t11374Z Brassica rapa HOM05D006410 ORTHO05D007914 4.9e-53 212.6 166 65.7
Zm00001eb395200 Zea mays HOM05D006410 ORTHO05D007914 4.9e-53 212.6 162 66.0
A03p21390 Brassica napus HOM05D006410 ORTHO05D007914 6.4e-53 212.2 214 55.6
CANSAT21G1321 Cannabis sativa HOM05D006410 ORTHO05D007914 1.4e-52 211.1 204 58.3
BcaC01g05529 Brassica carinata HOM05D006410 ORTHO05D007914 3.2e-52 209.9 213 56.8
BolC3t14920H Brassica oleracea HOM05D006410 ORTHO05D007914 3.2e-52 209.9 213 56.8
C03p25260 Brassica napus HOM05D006410 ORTHO05D007914 2.1e-51 207.2 213 56.3
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 3.3e-49 199.9 240 52.9
SEGI_21416 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 4.0e-47 193.0 166 56.6
Lj3A940G60 Lonicera japonica HOM05D006410 ORTHO05D007914 5.2e-47 192.6 240 48.3
SGA_v2.0_scaffold85G26601 Striga asiatica HOM05D006410 ORTHO05D007914 8.9e-47 191.8 252 47.2
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 3.7e-45 186.4 264 48.1
Cpa.g.sc86.77 Carica papaya HOM05D006410 ORTHO05D007914 2.1e-43 180.6 269 45.4
BcaB01g00971 Brassica carinata HOM05D006410 ORTHO05D007914 9.6e-41 171.8 176 56.8
SalBow5G0627 Salvia bowleyana HOM05D006410 ORTHO05D007914 2.8e-40 170.2 128 66.4
CSS0050432 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 7.8e-35 152.1 129 69.0
CSS0030024 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 6.6e-34 149.1 90 86.7
MELO3C025226.2 Cucumis melo HOM05D006410 ORTHO05D007914 6.6e-34 149.1 143 58.7
AagrBONN_evm.TU.Sc2ySwM_344.4011 Anthoceros agrestis HOM05D006410 ORTHO05D007914 1.2e-30 138.3 161 43.5
arahy.Tifrunner.gnm1.ann1.CPU7B3 Arachis hypogaea HOM05D006410 ORTHO05D007914 3.8e-29 133.3 92 72.8
RhsimUnG0084100 Rhododendron simsii HOM05D006410 ORTHO05D007914 9.3e-28 128.6 229 41.0
Os03g0334100 Oryza sativa ssp. japonica HOM05D006410 ORTHO05D007914 1.6e-27 127.9 99 64.6
CSS0025367 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 2.1e-27 127.5 132 57.6
RhsimUnG0080900 Rhododendron simsii HOM05D006410 ORTHO05D007914 2.3e-26 124.0 120 59.2
Sed0027859 Sechium edule HOM05D006410 ORTHO05D007914 4.8e-24 116.3 139 51.1
MCO09G517 Micromonas commoda HOM05D006410 ORTHO05D007914 1.4e-23 114.8 170 38.2
CBR_g644 Chara braunii HOM05D006410 ORTHO05D007914 1.5e-17 94.7 160 31.2
CDE04G1109 Ceratophyllum demersum HOM05D040252 ORTHO05D007914 2.0e-14 84.3 66 66.7
Duzib151G0462 Durio zibethinus HOM05D006410 ORTHO05D007914 2.0e-14 84.3 61 68.9
SEGI_07330 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 3.2e-12 77.0 76 52.6
Cre17.g738200 Chlamydomonas reinhardtii HOM05D006410 ORTHO05D007914 7.4e-09 65.9 157 31.8
Oeu030096.1 Olea europaea HOM05D006410 ORTHO05D007914 1.2e-06 58.5 89 40.4
Lsat_1_v5_gn_8_97960 Lactuca sativa HOM05D006410 ORTHO05D007914 3.4e-06 57.0 34 88.2
CDE06G0605 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 4.5e-06 56.6 126 34.1
CSS0000421 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 7.6e-06 55.8 77 49.4


User provided reference genes

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