Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc07g0005680 Simmondsia chinensis HOM05D006689 ORTHO05D008349 1.1e-201 706.4 348 100.0
Hma1.2p1_0064F.1_g034840 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 2.7e-120 436.0 298 68.1
TAR633G1471 Trochodendron aralioides HOM05D006689 ORTHO05D008349 2.7e-120 436.0 335 62.4
GSVIVG01033928001 Vitis vinifera HOM05D006689 ORTHO05D008349 3.6e-117 425.6 300 66.0
Actinidia32058 Actinidia chinensis HOM05D006689 ORTHO05D008349 2.3e-116 422.9 319 63.3
Cc06_g06350 Coffea canephora HOM05D006689 ORTHO05D008349 2.3e-116 422.9 294 65.3
CSS0035173 Camellia sinensis var. sinensis HOM05D006689 ORTHO05D008349 4.0e-116 422.2 310 64.2
MD14G1035800 Malus domestica HOM05D006689 ORTHO05D008349 3.4e-115 419.1 353 59.2
Psat3g030240 Pisum sativum HOM05D006689 ORTHO05D008349 2.2e-114 416.4 330 59.7
FvH4_6g19910 Fragaria vesca HOM05D006689 ORTHO05D008349 8.3e-114 414.5 301 64.8
Atru.chr8.1397 Acer truncatum HOM05D006689 ORTHO05D008349 7.7e-112 407.9 309 62.8
Lj1g0003895 Lotus japonicus HOM05D006689 ORTHO05D008349 1.1e-110 404.1 329 59.3
Sopen01g003330 Solanum pennellii HOM05D006689 ORTHO05D008349 1.5e-110 403.7 299 63.5
PGR004G2039 Punica granatum HOM05D006689 ORTHO05D008349 2.5e-110 402.9 296 62.8
Aa31LG3G5030 Aethionema arabicum HOM05D006689 ORTHO05D008349 3.3e-110 402.5 302 62.6
TPR.G23318 Trifolium pratense HOM05D006689 ORTHO05D008349 5.6e-110 401.7 297 63.0
Potri.016G072700 Populus trichocarpa HOM05D006689 ORTHO05D008349 7.3e-110 401.4 298 64.1
Eucgr.A02606 Eucalyptus grandis HOM05D006689 ORTHO05D008349 1.2e-109 400.6 325 56.9
Solyc01g007790.4 Solanum lycopersicum HOM05D006689 ORTHO05D008349 1.6e-109 400.2 345 57.1
Lalb_Chr20g0111471 Lupinus albus HOM05D006689 ORTHO05D008349 6.1e-109 398.3 296 61.8
CANSAT64G2446 Cannabis sativa HOM05D006689 ORTHO05D008349 8.0e-109 397.9 347 56.2
Prupe.7G098300 Prunus persica HOM05D006689 ORTHO05D008349 1.4e-108 397.1 299 64.2
Aqoxy4G02685 Aquilegia oxysepala HOM05D006689 ORTHO05D008349 4.0e-108 395.6 310 60.3
PSO384G4437 Papaver somniferum HOM05D006689 ORTHO05D008349 6.8e-108 394.8 296 60.5
Oeu017715.1 Olea europaea HOM05D006689 ORTHO05D008349 8.9e-108 394.4 347 55.9
Lalb_Chr01g0017911 Lupinus albus HOM05D006689 ORTHO05D008349 1.5e-107 393.7 311 59.8
Nn6g34760 Nelumbo nucifera HOM05D006689 ORTHO05D008349 5.7e-107 391.7 310 59.0
Cpa.g.sc104.62 Carica papaya HOM05D006689 ORTHO05D008349 1.7e-106 390.2 311 58.2
PSO339G4581 Papaver somniferum HOM05D006689 ORTHO05D008349 1.7e-106 390.2 296 60.1
QL07p037495 Quercus lobata HOM05D006689 ORTHO05D008349 1.7e-106 390.2 334 58.1
TWI74G1155 Tripterygium wilfordii HOM05D006689 ORTHO05D008349 1.7e-106 390.2 333 55.3
Sp3g09850 Schrenkiella parvula HOM05D006689 ORTHO05D008349 2.9e-106 389.4 299 61.9
AL3G23170 Arabidopsis lyrata HOM05D006689 ORTHO05D008349 8.3e-106 387.9 336 56.2
Thhalv10021180m.g Eutrema salsugineum HOM05D006689 ORTHO05D008349 1.1e-105 387.5 302 59.9
Duzib106G1273 Durio zibethinus HOM05D006689 ORTHO05D008349 1.4e-105 387.1 326 56.7
CARHR086170 Cardamine hirsuta HOM05D006689 ORTHO05D008349 3.2e-105 386.0 302 60.9
CsaV3_6G040970 Cucumis sativus L. HOM05D006689 ORTHO05D008349 4.1e-105 385.6 297 57.6
FAN14G3242 Fragaria x ananassa HOM05D006689 ORTHO05D008349 5.4e-105 385.2 301 62.1
FAN02G4476 Fragaria x ananassa HOM05D006689 ORTHO05D008349 2.0e-104 383.3 301 61.8
MD12G1034600 Malus domestica HOM05D006689 ORTHO05D008349 1.0e-103 380.9 286 64.3
QL07p037513 Quercus lobata HOM05D006689 ORTHO05D008349 1.0e-103 380.9 307 58.3
BcaB04g18654 Brassica carinata HOM05D006689 ORTHO05D008349 1.7e-103 380.2 302 59.6
FAN05G1672 Fragaria x ananassa HOM05D006689 ORTHO05D008349 1.7e-103 380.2 301 61.1
BcaC01g04099 Brassica carinata HOM05D006689 ORTHO05D008349 5.0e-103 378.6 294 61.2
AT3G11620 Arabidopsis thaliana HOM05D006689 ORTHO05D008349 8.6e-103 377.9 286 61.9
C03p45070 Brassica napus HOM05D006689 ORTHO05D008349 8.6e-103 377.9 292 61.3
BraA03t12881Z Brassica rapa HOM05D006689 ORTHO05D008349 1.9e-102 376.7 289 62.6
Carub.0003s1094 Capsella rubella HOM05D006689 ORTHO05D008349 2.5e-102 376.3 302 58.9
CiPaw.09G018700 Carya illinoinensis HOM05D006689 ORTHO05D008349 3.3e-102 375.9 334 56.0
A03p37220 Brassica napus HOM05D006689 ORTHO05D008349 4.3e-102 375.6 288 61.8
BraA05t22567Z Brassica rapa HOM05D006689 ORTHO05D008349 1.6e-101 373.6 294 60.2
DCAR_013430 Daucus carota HOM05D006689 ORTHO05D008349 1.6e-101 373.6 296 58.8
C05p56320 Brassica napus HOM05D006689 ORTHO05D008349 2.3e-100 369.8 294 59.5
BolC5t34296H Brassica oleracea HOM05D006689 ORTHO05D008349 4.4e-99 365.5 286 60.1
A05p37720 Brassica napus HOM05D006689 ORTHO05D008349 5.8e-99 365.2 294 59.5
Gorai.009G398000 Gossypium raimondii HOM05D006689 ORTHO05D008349 1.3e-98 364.0 310 54.5
HanXRQChr13g0398201 Helianthus annuus HOM05D006689 ORTHO05D008349 1.3e-98 364.0 291 57.0
MBI17_g00993_MAGBIO Magnolia biondii HOM05D006689 ORTHO05D008349 1.3e-98 364.0 308 57.8
Cfa016668 Carpinus fangiana HOM05D006689 ORTHO05D008349 2.2e-98 363.2 301 58.5
SEGI_26711 Sequoiadendron giganteum HOM05D006689 ORTHO05D008349 4.9e-98 362.1 297 56.6
Nitab4.5_0000665g0040 Nicotiana tabacum HOM05D006689 ORTHO05D008349 6.4e-98 361.7 321 54.8
Zm00001eb362600 Zea mays HOM05D006689 ORTHO05D008349 3.2e-97 359.4 296 55.7
BcaB06g25602 Brassica carinata HOM05D006689 ORTHO05D008349 5.4e-97 358.6 306 56.9
ATR0772G132 Amborella trichopoda HOM05D006689 ORTHO05D008349 2.7e-96 356.3 259 64.9
HPP92_023075 Vanilla planifolia HOM05D006689 ORTHO05D008349 6.0e-96 355.1 296 57.8
arahy.Tifrunner.gnm1.ann1.YAPI8V Arachis hypogaea HOM05D006689 ORTHO05D008349 6.6e-95 351.7 300 53.7
Phvul.001G194040 Phaseolus vulgaris HOM05D006689 ORTHO05D008349 4.3e-94 349.0 257 61.9
Ciclev10011965m.g Citrus clementina HOM05D006689 ORTHO05D008349 2.1e-93 346.7 332 51.2
FAN09G0196 Fragaria x ananassa HOM05D006689 ORTHO05D008349 1.4e-92 344.0 393 47.1
Peaxi162Scf00419g00069 Petunia axillaris HOM05D006689 ORTHO05D008349 1.8e-92 343.6 298 57.4
BcaC05g29349 Brassica carinata HOM05D006689 ORTHO05D008349 2.3e-92 343.2 283 58.0
ClCG04G010350 Citrullus lanatus HOM05D006689 ORTHO05D008349 8.9e-92 341.3 293 54.3
Sed0011891 Sechium edule HOM05D006689 ORTHO05D008349 1.5e-91 340.5 261 58.6
Rhsim03G0067100 Rhododendron simsii HOM05D006689 ORTHO05D008349 5.8e-91 338.6 438 43.2
ECA233G1524 Erigeron canadensis HOM05D006689 ORTHO05D008349 2.2e-90 336.7 286 53.5
FAN05G0890 Fragaria x ananassa HOM05D006689 ORTHO05D008349 5.1e-87 325.5 259 61.4
RcHm_v2.0_Chr3g0475311 Rosa chinensis HOM05D006689 ORTHO05D008349 8.1e-85 318.2 239 63.2
arahy.Tifrunner.gnm1.ann1.ZIE5B9 Arachis hypogaea HOM05D006689 ORTHO05D008349 8.9e-84 314.7 300 50.0
Lsat_1_v5_gn_6_35180 Lactuca sativa HOM05D006689 ORTHO05D008349 2.2e-82 310.1 280 52.5
Pp3c13_7330 Physcomitrium patens HOM05D006689 ORTHO05D008349 1.9e-81 307.0 323 46.4
Migut.L01819 Erythranthe guttata HOM05D006689 ORTHO05D008349 9.2e-81 304.7 235 59.1
Medtr7g105800 Medicago truncatula HOM05D006689 ORTHO05D008349 2.7e-80 303.1 237 57.4
Haze_19679 Corylus avellana HOM05D006689 ORTHO05D008349 8.6e-79 298.1 341 47.5
Nitab4.5_0000020g0370 Nicotiana tabacum HOM05D006689 ORTHO05D008349 1.9e-78 297.0 235 58.3
Manes.09G048600 Manihot esculenta HOM05D006689 ORTHO05D008349 2.1e-77 293.5 229 61.1
Hma1.2p1_0064F.1_g034850 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 1.8e-76 290.4 201 69.2
Sabra16G0075500 Salix brachista HOM05D006689 ORTHO05D008349 8.4e-74 281.6 342 46.8
Gohir.D04G095300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 1.2e-72 277.7 249 53.0
SalBow5G2063 Salvia bowleyana HOM05D006689 ORTHO05D008349 4.6e-72 275.8 311 46.9
SMO272G0021 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 1.9e-70 270.4 282 46.1
CAN.G574.36 Capsicum annuum HOM05D006689 ORTHO05D008349 1.3e-69 267.7 210 60.0
Hund19873 Selenicereus undatus HOM05D006689 ORTHO05D008349 6.2e-69 265.4 314 48.7
SMO165G0131 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 1.9e-65 253.8 309 41.7
AUR62037035 Chenopodium quinoa HOM05D006689 ORTHO05D008349 1.6e-64 250.8 194 62.9
Thecc.05G100700 Theobroma cacao HOM05D006689 ORTHO05D008349 7.9e-64 248.4 207 56.5
AUR62006266 Chenopodium quinoa HOM05D006689 ORTHO05D008349 1.7e-63 247.3 194 63.4
EL10Ac7g16816 Beta vulgaris HOM05D006689 ORTHO05D008349 1.9e-57 227.3 200 58.5
CDE02G4301 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 3.7e-53 213.0 174 59.8
MELO3C024575.2 Cucumis melo HOM05D006689 ORTHO05D008349 7.6e-51 205.3 301 39.5
unitig_22.g6018 Utricularia gibba HOM05D006689 ORTHO05D008349 6.7e-47 192.2 311 35.0
Glyma.03G200300 Glycine max HOM05D006689 ORTHO05D008349 4.3e-46 189.5 145 60.0
vmacro07460 Vaccinium macrocarpon HOM05D006689 ORTHO05D008349 2.4e-44 183.7 404 33.7
Glyma.19G197900 Glycine max HOM05D006689 ORTHO05D008349 3.1e-44 183.3 295 35.6
PGSC0003DMG400016416 Solanum tuberosum HOM05D006689 ORTHO05D008349 2.6e-43 180.3 140 57.1
Gohir.A04G061585 Gossypium hirsutum HOM05D006689 ORTHO05D008349 4.6e-40 169.5 163 49.7
BolC3t16769H Brassica oleracea HOM05D006689 ORTHO05D008349 7.4e-38 162.2 122 60.7
Gohir.A04G061300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 3.8e-34 149.8 102 61.8
Actinidia03903 Actinidia chinensis HOM05D006689 ORTHO05D008349 2.0e-30 137.5 142 53.5
SGA_v2.0_scaffold184G40008 Striga asiatica HOM05D006689 ORTHO05D008349 4.8e-29 132.9 102 52.9
CDE02G1185 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 8.2e-29 132.1 87 65.5
MCO04G525 Micromonas commoda HOM05D006689 ORTHO05D008349 6.9e-28 129.0 309 30.1
COL.COLO4_29616 Corchorus olitorius HOM05D006689 ORTHO05D008349 4.5e-27 126.3 81 66.7
Ah.08g210180 Amaranthus hybridus HOM05D006689 ORTHO05D008349 2.9e-26 123.6 208 38.5
Aa31LG3G5020 Aethionema arabicum HOM05D006689 ORTHO05D008349 2.3e-23 114.0 96 55.2
Cre09.g388319 Chlamydomonas reinhardtii HOM05D006689 ORTHO05D008349 3.0e-23 113.6 338 29.0
PRCOL_00001274 Prasinoderma coloniale HOM05D006689 ORTHO05D008349 1.4e-20 104.8 301 29.2
RcHm_v2.0_Chr3g0475321 Rosa chinensis HOM05D006689 ORTHO05D008349 9.4e-17 92.0 64 64.1
arahy.Tifrunner.gnm1.ann1.HW4B1R Arachis hypogaea HOM05D006689 ORTHO05D008349 6.1e-08 62.8 42 64.3
Hma1.2p1_1624F.1_g294270 Hydrangea macrophylla HOM05D000554 ORTHO05D000860 8.0e-08 62.4 45 60.0
Cfa021542 Carpinus fangiana HOM05D000750 ORTHO05D011662 1.4e-07 61.6 47 66.0
Hund19874 Selenicereus undatus HOM05D006689 ORTHO05D008349 5.2e-07 59.7 39 64.1
Sabra16G0075600 Salix brachista HOM05D006689 ORTHO05D008349 6.8e-07 59.3 45 55.6


User provided reference genes

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