Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc07g0005550 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.1e-148 530.0 275 100.0
Sc03g0005860 Simmondsia chinensis HOM05D010546 ORTHO05D013352 6.2e-80 301.6 275 61.5
Sc08g0006140 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.3e-42 177.6 112 82.1
Sc03g0004790 Simmondsia chinensis HOM05D010546 ORTHO05D013352 3.3e-41 172.9 275 45.5
Sc01g0006440 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.3e-40 171.0 108 82.4
Sc12g0008070 Simmondsia chinensis HOM05D010546 ORTHO05D013352 2.4e-39 166.8 109 81.7
Sc17g0003010 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.5e-38 164.1 115 77.4
Sc19g0006150 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.4e-36 157.5 127 69.3
Sc02g0004550 Simmondsia chinensis HOM05D010546 ORTHO05D013352 4.2e-36 156.0 109 78.0
Sc22g0004340 Simmondsia chinensis HOM05D010546 ORTHO05D013352 7.2e-36 155.2 109 76.1
Sc07g0004880 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.6e-35 154.1 109 76.1
Sc17g0002940 Simmondsia chinensis HOM05D010546 ORTHO05D013352 5.1e-34 149.1 108 73.1
Sc05g0002990 Simmondsia chinensis HOM05D010546 ORTHO05D013352 3.1e-31 139.8 89 82.0
Sc08g0003480 Simmondsia chinensis HOM05D010546 ORTHO05D013352 7.4e-25 118.6 84 76.2
AUR62022285 Chenopodium quinoa HOM05D003888 ORTHO05D007163 1.8e-23 114.0 313 30.4
EL10Ac2g03235 Beta vulgaris HOM05D000107 ORTHO05D000062 7.7e-22 108.6 221 34.4
EL10Ac6g14230 Beta vulgaris HOM05D000107 ORTHO05D000062 2.2e-21 107.1 217 35.5
Solyc10g017750.2 Solanum lycopersicum HOM05D003888 ORTHO05D007163 8.5e-21 105.1 177 36.2
EL10Ac7g16364 Beta vulgaris HOM05D000107 ORTHO05D000062 1.9e-20 104.0 253 32.0
EL10Ac4g09128 Beta vulgaris HOM05D000107 ORTHO05D000062 5.5e-20 102.4 233 33.9
AUR62024779 Chenopodium quinoa HOM05D003888 ORTHO05D007163 5.5e-20 102.4 330 27.9
EL10Ac4g09268 Beta vulgaris HOM05D000107 ORTHO05D000062 3.6e-19 99.8 276 31.5
EL10Ac7g17511 Beta vulgaris HOM05D000107 ORTHO05D000062 3.6e-19 99.8 238 31.9
EL10Ac1g01767 Beta vulgaris HOM05D003888 ORTHO05D007163 4.7e-19 99.4 307 30.9
EL10Ac2g02915 Beta vulgaris HOM05D000107 ORTHO05D000062 7.9e-19 98.6 312 29.5
PGSC0003DMG400038965 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.9e-19 98.6 216 33.3
EL10Ac1g02206 Beta vulgaris HOM05D000107 ORTHO05D000062 1.0e-18 98.2 324 27.5
PGSC0003DMG400036468 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.0e-18 98.2 218 33.5
PGSC0003DMG400003494 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.3e-18 97.1 200 33.0
PGSC0003DMG400046763 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.3e-18 97.1 227 29.5
EL10Ac3g06448 Beta vulgaris HOM05D003888 ORTHO05D007163 3.0e-18 96.7 202 35.1
Solyc04g005730.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.9e-18 96.3 320 26.9
Solyc11g032040.3 Solanum lycopersicum HOM05D000107 ORTHO05D000062 3.9e-18 96.3 205 34.1
Sc01g0004560 Simmondsia chinensis HOM05D010546 ORTHO05D013352 5.1e-18 95.9 72 73.6
PGSC0003DMG400039182 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.1e-18 95.9 245 30.6
EL10Ac5g11837 Beta vulgaris HOM05D000107 ORTHO05D000062 1.1e-17 94.7 272 29.8
EL10Ac4g08946 Beta vulgaris HOM05D000107 ORTHO05D007163 1.5e-17 94.4 274 31.4
EL10Ac9g20933 Beta vulgaris HOM05D000107 ORTHO05D007163 2.0e-17 94.0 291 29.9
PGSC0003DMG400035776 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.0e-17 94.0 263 29.7
Sc16g0004400 Simmondsia chinensis HOM05D010546 ORTHO05D013352 1.7e-16 90.9 56 85.7
EL10Ac4g09043 Beta vulgaris HOM05D003888 ORTHO05D007163 4.8e-16 89.4 264 30.3
Sc09g0006360 Simmondsia chinensis HOM05D010546 ORTHO05D013352 4.8e-16 89.4 71 67.6
EL10Ac6g13838 Beta vulgaris HOM05D003888 ORTHO05D007163 1.1e-15 88.2 244 31.1
EL10Ac9g20800 Beta vulgaris HOM05D003888 ORTHO05D007163 1.4e-15 87.8 316 26.9
Sc07g0004340 Simmondsia chinensis HOM05D010546 ORTHO05D013352 5.3e-15 85.9 70 67.1
PGSC0003DMG400037028 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.6e-14 84.3 233 31.3
AUR62025805 Chenopodium quinoa HOM05D003888 ORTHO05D007163 3.5e-14 83.2 133 40.6
Hund03533 Selenicereus undatus HOM05D009146 ORTHO05D011649 1.7e-13 80.9 288 26.7
PGSC0003DMG400010920 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.2e-13 80.5 252 26.6
EL10Ac9g20905 Beta vulgaris HOM05D003888 ORTHO05D007163 2.9e-13 80.1 308 26.3
Hund12964 Selenicereus undatus HOM05D009146 ORTHO05D011649 2.9e-13 80.1 319 25.4
EL10Ac9g20782 Beta vulgaris HOM05D010317 ORTHO05D007163 3.8e-13 79.7 109 41.3
PGSC0003DMG400017141 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.9e-12 77.4 145 36.6
EL10Ac9g22721 Beta vulgaris HOM05D000107 ORTHO05D000062 4.2e-12 76.3 203 29.1
AUR62029973 Chenopodium quinoa HOM05D003888 ORTHO05D007163 7.2e-12 75.5 258 27.9
CAN.G1224.2 Capsicum annuum HOM05D003888 ORTHO05D007163 9.4e-12 75.1 292 26.0
EL10Ac2g03313 Beta vulgaris HOM05D000107 ORTHO05D000062 4.7e-11 72.8 120 39.2
Solyc02g038809.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 6.1e-11 72.4 153 33.3
Sc11g0003730 Simmondsia chinensis HOM05D010546 ORTHO05D388761 8.0e-11 72.0 52 75.0
Sopen11g014670 Solanum pennellii HOM05D003888 ORTHO05D007163 1.8e-10 70.9 86 46.5
Sc02g0005550 Simmondsia chinensis HOM05D003888 ORTHO05D011649 3.0e-10 70.1 124 35.5
CAN.G647.20 Capsicum annuum HOM05D003888 ORTHO05D007163 4.0e-10 69.7 122 36.9
EL10Ac8g19343 Beta vulgaris HOM05D000107 ORTHO05D007163 6.7e-10 68.9 345 25.5
Solyc07g021500.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 6.7e-10 68.9 104 40.4
Solyc10g052640.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 6.7e-10 68.9 256 26.2
Sopen02g012530 Solanum pennellii HOM05D003888 ORTHO05D007163 8.8e-10 68.6 136 32.4
Sopen10g017940 Solanum pennellii HOM05D003888 ORTHO05D007163 3.3e-09 66.6 85 40.0
PGSC0003DMG400010915 Solanum tuberosum HOM05D003888 ORTHO05D007163 7.5e-09 65.5 88 39.8
EL10Ac3g06642 Beta vulgaris HOM05D000107 ORTHO05D000062 1.3e-08 64.7 117 35.0
Hund10867 Selenicereus undatus HOM05D009146 ORTHO05D011649 1.3e-08 64.7 99 38.4
EL10Ac5g11043 Beta vulgaris HOM05D000107 ORTHO05D007163 4.8e-08 62.8 120 34.2
PGSC0003DMG400044246 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.8e-08 62.8 221 25.8
Hund15065 Selenicereus undatus HOM05D009146 ORTHO05D011649 6.3e-08 62.4 101 33.7
PGSC0003DMG400034519 Solanum tuberosum HOM05D003888 ORTHO05D007163 8.2e-08 62.0 65 50.8
EL10Ac1g02033 Beta vulgaris HOM05D003888 ORTHO05D007163 1.4e-07 61.2 316 24.4
CAN.G472.23 Capsicum annuum HOM05D003888 ORTHO05D007163 1.8e-07 60.8 82 41.5
SalBow5G3729 Salvia bowleyana HOM05D004072 ORTHO05D007163 1.8e-07 60.8 191 29.3
PGSC0003DMG400042112 Solanum tuberosum HOM05D000107 ORTHO05D000062 1.8e-07 60.8 79 39.2
SalBow6G6573 Salvia bowleyana HOM05D003888 ORTHO05D007163 2.4e-07 60.5 135 35.6
Sopen06g011310 Solanum pennellii HOM05D003888 ORTHO05D007163 2.4e-07 60.5 231 25.5
Solyc07g017907.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 3.1e-07 60.1 100 34.0
PGSC0003DMG400036303 Solanum tuberosum HOM05D003888 ORTHO05D007163 3.1e-07 60.1 65 49.2
Nitab4.5_0012868g0030 Nicotiana tabacum HOM05D003888 ORTHO05D007163 4.1e-07 59.7 74 39.2
Solyc10g049330.3 Solanum lycopersicum HOM05D003888 ORTHO05D007163 4.1e-07 59.7 131 32.8
PGSC0003DMG400032589 Solanum tuberosum HOM05D003888 ORTHO05D007163 4.1e-07 59.7 63 50.8
EL10Ac6g13912 Beta vulgaris HOM05D000107 ORTHO05D000062 5.3e-07 59.3 169 28.4
CAN.G563.1 Capsicum annuum HOM05D003888 ORTHO05D007163 1.2e-06 58.2 86 40.7
Sc11g0003740 Simmondsia chinensis HOM05D059781 ORTHO05D051010 1.6e-06 57.8 41 65.9
Sopen11g016570 Solanum pennellii HOM05D003888 ORTHO05D007163 1.6e-06 57.8 85 32.9
PGSC0003DMG400005234 Solanum tuberosum HOM05D003888 ORTHO05D007163 1.6e-06 57.8 71 42.3
Solyc07g039250.1 Solanum lycopersicum HOM05D003888 ORTHO05D007163 2.0e-06 57.4 65 43.1
PGSC0003DMG400037695 Solanum tuberosum HOM05D003888 ORTHO05D007163 2.0e-06 57.4 67 40.3
CAN.G133.3 Capsicum annuum HOM05D003888 ORTHO05D007163 3.5e-06 56.6 82 39.0
Hund17901 Selenicereus undatus HOM05D023848 ORTHO05D007163 4.5e-06 56.2 130 34.6
Sopen12g012320 Solanum pennellii HOM05D003888 ORTHO05D007163 5.9e-06 55.8 111 34.2
PGSC0003DMG400045356 Solanum tuberosum HOM05D003888 ORTHO05D007163 5.9e-06 55.8 67 38.8
TAR627G0151 Trochodendron aralioides HOM05D000054 ORTHO05D000171 5.9e-06 55.8 123 29.3
EL10Ac9g22369 Beta vulgaris HOM05D000107 ORTHO05D000062 7.7e-06 55.5 90 36.7


User provided reference genes

Program Settings