Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc07g0004510 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.6e-106 387.9 195 100.0
Sc02g0004970 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.7e-37 159.5 128 63.3
Sc08g0005440 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.5e-37 159.1 143 63.6
Sc24g0001190 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.3e-36 157.1 128 61.7
Sc13g0007430 Simmondsia chinensis HOM05D007912 ORTHO05D010251 7.3e-35 151.4 133 61.7
Sc12g0007100 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.2e-34 150.6 128 64.1
Sc11g0004150 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.8e-32 141.7 111 69.4
Sc17g0003520 Simmondsia chinensis HOM05D007912 ORTHO05D010251 8.4e-31 137.9 112 64.3
Sc05g0005690 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.2e-30 136.0 111 66.7
Sc14g0002490 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.2e-30 136.0 118 60.2
Sc17g0003150 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.2e-30 135.6 176 46.6
Sc22g0004320 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.6e-29 133.7 111 66.7
Sc01g0006550 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.0e-29 131.7 140 57.1
Sc03g0004300 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.0e-28 131.0 110 65.5
Sc24g0001130 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.0e-28 129.4 110 67.3
Sc05g0005050 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.2e-26 121.7 92 68.5
Sc05g0004480 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.0e-24 116.7 122 54.1
Sc15g0002320 Simmondsia chinensis HOM05D007912 ORTHO05D010251 7.6e-24 114.8 92 70.7
Sc17g0003130 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.9e-23 112.1 102 58.8
Sc06g0004250 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.4e-23 111.7 110 56.4
Sc13g0008210 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.4e-22 110.5 86 68.6
Sc03g0005210 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.9e-22 110.2 112 52.7
Sc24g0001220 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.2e-21 107.5 100 60.0
Sc23g0003790 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.6e-21 107.1 110 56.4
Sc02g0004160 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.5e-21 105.9 71 73.2
Sc01g0005460 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.6e-21 105.5 99 62.6
Sc02g0004980 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.6e-21 105.5 89 65.2
Sc18g0005300 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.0e-21 105.1 100 59.0
Sc05g0004430 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.1e-19 100.9 92 58.7
Sc20g0002780 Simmondsia chinensis HOM05D007912 ORTHO05D010251 7.4e-19 98.2 80 65.0
Sc26g0003020 Simmondsia chinensis HOM05D007912 ORTHO05D010251 9.6e-19 97.8 80 63.8
Sc05g0004680 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.6e-18 97.1 96 56.2
Sc14g0004880 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.7e-18 95.9 80 66.2
Sc02g0005760 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.8e-18 95.5 80 65.0
Sc21g0003860 Simmondsia chinensis HOM05D007912 ORTHO05D010251 8.1e-18 94.7 110 51.8
Sc02g0004890 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.4e-17 94.0 80 63.8
Sc04g0004840 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.3e-17 92.0 73 68.5
Sc10g0007130 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.3e-17 92.0 106 53.8
Sc22g0004420 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.3e-17 92.0 80 60.0
Sc22g0004270 Simmondsia chinensis HOM05D007912 ORTHO05D010251 9.0e-17 91.3 83 59.0
Sc08g0004760 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.2e-15 86.7 67 64.2
Sc02g0004480 Simmondsia chinensis HOM05D007912 ORTHO05D010251 8.4e-15 84.7 70 62.9
Sc02g0004810 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.4e-14 83.2 93 51.6
Sc01g0006390 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.2e-14 82.8 63 65.1
Sabra13G0012400 Salix brachista HOM05D020966 ORTHO05D010251 9.3e-14 81.3 112 42.0
Sc17g0002860 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.1e-13 80.1 64 67.2
Sc01g0006690 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.0e-12 77.8 67 59.7
Sc02g0005270 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.1e-12 75.5 80 53.8
Sc08g0005480 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.1e-11 74.3 51 74.5
Sc07g0005080 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.5e-11 73.9 84 53.6
Sc17g0003650 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.3e-11 72.4 75 52.0
Sc11g0004270 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.6e-11 72.0 54 61.1
Sc10g0007340 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.4e-09 67.4 56 60.7
EL10Ac2g03892 Beta vulgaris HOM05D020966 ORTHO05D023391 5.3e-09 65.5 95 42.1
Sc01g0005490 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.9e-09 65.1 72 45.8
AUR62022070 Chenopodium quinoa HOM05D020966 ORTHO05D023391 2.6e-08 63.2 95 43.2
AUR62009156 Chenopodium quinoa HOM05D020966 ORTHO05D023391 3.4e-08 62.8 95 43.2
Sc12g0008150 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.0e-07 61.2 55 61.8
Ah.11g044760 Amaranthus hybridus HOM05D020966 ORTHO05D023391 2.9e-07 59.7 84 40.5
Nitab4.5_0001698g0060 Nicotiana tabacum HOM05D008778 ORTHO05D003639 8.4e-07 58.2 90 35.6
RcHm_v2.0_Chr5g0004321 Rosa chinensis HOM05D008702 ORTHO05D003639 2.5e-06 56.6 85 35.3
Sc04g0004730 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.2e-06 56.2 55 54.5
Peaxi162Scf00820g00117 Petunia axillaris HOM05D008778 ORTHO05D003639 4.2e-06 55.8 100 36.0
RcHm_v2.0_Chr2g0138191 Rosa chinensis HOM05D008702 ORTHO05D003639 4.2e-06 55.8 85 37.6
RcHm_v2.0_Chr2g0116581 Rosa chinensis HOM05D008702 ORTHO05D003639 5.5e-06 55.5 85 37.6
RcHm_v2.0_Chr2g0142701 Rosa chinensis HOM05D008702 ORTHO05D003639 5.5e-06 55.5 85 37.6
RcHm_v2.0_Chr2g0152981 Rosa chinensis HOM05D008702 ORTHO05D003639 5.5e-06 55.5 74 43.2
RcHm_v2.0_Chr6g0249161 Rosa chinensis HOM05D008702 ORTHO05D003639 5.5e-06 55.5 85 37.6
RcHm_v2.0_Chr2g0121071 Rosa chinensis HOM05D008702 ORTHO05D003639 7.1e-06 55.1 85 37.6


User provided reference genes

Program Settings