Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc07g0004450 Simmondsia chinensis HOM05D010414 ORTHO05D000385 1.8e-90 335.9 168 100.0
Sc19g0006190 Simmondsia chinensis HOM05D010414 ORTHO05D000385 2.3e-37 159.5 105 73.3
Sc07g0004310 Simmondsia chinensis HOM05D010414 ORTHO05D000385 2.0e-36 156.4 197 49.7
Sc01g0006220 Simmondsia chinensis HOM05D004615 ORTHO05D000385 4.0e-29 132.1 134 54.5
Sc06g0003990 Simmondsia chinensis HOM05D004615 ORTHO05D000385 7.5e-28 127.9 96 66.7
Sc20g0003820 Simmondsia chinensis HOM05D004615 ORTHO05D000385 1.6e-25 120.2 93 63.4
Sc11g0005930 Simmondsia chinensis HOM05D010414 ORTHO05D000385 2.5e-23 112.8 162 46.9
Sc07g0005190 Simmondsia chinensis HOM05D010414 ORTHO05D000385 1.2e-22 110.5 88 69.3
Sc21g0002620 Simmondsia chinensis HOM05D010414 ORTHO05D000385 8.8e-21 104.4 63 88.9
Sc05g0004900 Simmondsia chinensis HOM05D010414 ORTHO05D000385 3.7e-19 99.0 60 75.0
Sc04g0003740 Simmondsia chinensis HOM05D010414 ORTHO05D000385 7.7e-17 91.3 56 83.9
Sc07g0005310 Simmondsia chinensis HOM05D010414 ORTHO05D000385 4.7e-14 82.0 49 89.8
EL10Ac2g03160 Beta vulgaris HOM05D004615 ORTHO05D000385 3.0e-13 79.3 84 41.7
EL10Ac2g02989 Beta vulgaris HOM05D004615 ORTHO05D000385 5.2e-13 78.6 100 30.0
Sc08g0005170 Simmondsia chinensis HOM05D010414 ORTHO05D000385 6.8e-13 78.2 49 85.7
EL10Ac6g14405 Beta vulgaris HOM05D004615 ORTHO05D000385 8.9e-13 77.8 69 40.6
EL10Ac7g17625 Beta vulgaris HOM05D004615 ORTHO05D000385 8.9e-13 77.8 70 40.0
TPR.G7595 Trifolium pratense HOM05D008859 ORTHO05D007166 9.8e-12 74.3 70 40.0
AUR62019486 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.3e-11 73.9 71 42.3
AUR62027501 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.3e-11 73.9 92 33.7
AUR62034983 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.3e-11 73.9 93 34.4
TPR.G13785 Trifolium pratense HOM05D004615 ORTHO05D000385 1.7e-11 73.6 81 39.5
AUR62020782 Chenopodium quinoa HOM05D004615 ORTHO05D000385 3.7e-11 72.4 71 38.0
SGA_v2.0_scaffold107G30768 Striga asiatica HOM05D004615 ORTHO05D000385 3.7e-11 72.4 70 40.0
AUR62014955 Chenopodium quinoa HOM05D008127 ORTHO05D000385 4.9e-11 72.0 70 42.9
AUR62031351 Chenopodium quinoa HOM05D014060 ORTHO05D000385 8.3e-11 71.2 64 45.3
Lj1g0024910 Lotus japonicus HOM05D004615 ORTHO05D007166 1.1e-10 70.9 69 42.0
Psat7g230640 Pisum sativum HOM05D008859 ORTHO05D007166 1.4e-10 70.5 75 40.0
AUR62040424 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.8e-10 70.1 70 37.1
AUR62030655 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.4e-10 69.7 71 38.0
AUR62031856 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.4e-10 69.7 70 38.6
AUR62043459 Chenopodium quinoa HOM05D004615 ORTHO05D000385 2.4e-10 69.7 73 37.0
AUR62044017 Chenopodium quinoa HOM05D004615 ORTHO05D000062 2.4e-10 69.7 93 31.2
Hund31150 Selenicereus undatus HOM05D004615 ORTHO05D000385 2.4e-10 69.7 71 36.6
EL10Ac1g01843 Beta vulgaris HOM05D009343 ORTHO05D011970 3.2e-10 69.3 74 35.1
AUR62007689 Chenopodium quinoa HOM05D004615 ORTHO05D000385 3.2e-10 69.3 70 38.6
AUR62043404 Chenopodium quinoa HOM05D004615 ORTHO05D000385 3.2e-10 69.3 70 37.1
AUR62035941 Chenopodium quinoa HOM05D004615 ORTHO05D000385 4.1e-10 68.9 71 38.0
EL10Ac3g06255 Beta vulgaris HOM05D004615 ORTHO05D000385 5.4e-10 68.6 68 36.8
AUR62037964 Chenopodium quinoa HOM05D014060 ORTHO05D000385 5.4e-10 68.6 70 42.9
SGA_v2.0_scaffold623G53232 Striga asiatica HOM05D004615 ORTHO05D000385 5.4e-10 68.6 69 39.1
EL10Ac3g06149 Beta vulgaris HOM05D004615 ORTHO05D000385 7.0e-10 68.2 69 36.2
EL10Ac9g21235 Beta vulgaris HOM05D004615 ORTHO05D000385 7.0e-10 68.2 69 36.2
AUR62042260 Chenopodium quinoa HOM05D004615 ORTHO05D000385 7.0e-10 68.2 70 37.1
AUR62033141 Chenopodium quinoa HOM05D004615 ORTHO05D000385 9.2e-10 67.8 71 38.0
AUR62041916 Chenopodium quinoa HOM05D004615 ORTHO05D000385 9.2e-10 67.8 70 35.7
Psat7g204000 Pisum sativum HOM05D008859 ORTHO05D007166 9.2e-10 67.8 70 35.7
EL10Ac2g03424 Beta vulgaris HOM05D004615 ORTHO05D000385 1.2e-09 67.4 73 34.2
AUR62015616 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.2e-09 67.4 70 35.7
Psat5g236880 Pisum sativum HOM05D008859 ORTHO05D007166 1.2e-09 67.4 70 35.7
EL10Ac1g02022 Beta vulgaris HOM05D004615 ORTHO05D000385 1.6e-09 67.0 67 35.8
Lj2g0009854 Lotus japonicus HOM05D008859 ORTHO05D007166 1.6e-09 67.0 110 30.0
Hund15079 Selenicereus undatus HOM05D020107 ORTHO05D000385 1.6e-09 67.0 73 35.6
AUR62042512 Chenopodium quinoa HOM05D014060 ORTHO05D000385 2.0e-09 66.6 64 40.6
DCAR_032097 Daucus carota HOM05D004615 ORTHO05D000385 2.0e-09 66.6 63 44.4
Psat5g270240 Pisum sativum HOM05D008859 ORTHO05D007166 3.5e-09 65.9 87 32.2
EL10Ac1g01725 Beta vulgaris HOM05D004615 ORTHO05D000385 7.8e-09 64.7 73 32.9
Sc11g0003700 Simmondsia chinensis HOM05D010414 ORTHO05D000385 7.8e-09 64.7 41 65.9
Hund10043 Selenicereus undatus HOM05D009682 ORTHO05D000385 1.0e-08 64.3 104 36.5
AUR62011687 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.3e-08 63.9 66 36.4
AUR62024348 Chenopodium quinoa HOM05D014060 ORTHO05D000385 1.3e-08 63.9 64 42.2
AUR62040143 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.3e-08 63.9 67 37.3
AUR62042361 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.3e-08 63.9 57 43.9
Lj4g0021021 Lotus japonicus HOM05D004615 ORTHO05D000385 2.3e-08 63.2 69 39.1
AUR62019804 Chenopodium quinoa HOM05D004615 ORTHO05D000385 5.0e-08 62.0 72 34.7
AUR62031864 Chenopodium quinoa HOM05D004615 ORTHO05D000385 5.0e-08 62.0 68 35.3
EL10Ac8g18984 Beta vulgaris HOM05D010065 ORTHO05D000385 6.6e-08 61.6 73 32.9
Phvul.L001738 Phaseolus vulgaris HOM05D008859 ORTHO05D007166 6.6e-08 61.6 70 35.7
AUR62010806 Chenopodium quinoa HOM05D004615 ORTHO05D000385 8.6e-08 61.2 68 35.3
Lalb_Chr20g0115001 Lupinus albus HOM05D000107 ORTHO05D000062 1.1e-07 60.8 61 39.3
DCAR_022238 Daucus carota HOM05D004615 ORTHO05D000385 3.3e-07 59.3 64 35.9
DCAR_029785 Daucus carota HOM05D004615 ORTHO05D000385 3.3e-07 59.3 64 35.9
DCAR_032376 Daucus carota HOM05D013476 ORTHO05D012368 3.3e-07 59.3 64 35.9
Ah.02g122150 Amaranthus hybridus HOM05D004615 ORTHO05D000385 9.5e-07 57.8 63 34.9
AUR62013324 Chenopodium quinoa HOM05D010065 ORTHO05D000385 1.6e-06 57.0 73 30.1
AUR62033658 Chenopodium quinoa HOM05D004615 ORTHO05D000385 1.6e-06 57.0 54 37.0
AUR62042816 Chenopodium quinoa HOM05D010065 ORTHO05D000385 1.6e-06 57.0 73 30.1
Sopen01g007850 Solanum pennellii HOM05D008041 ORTHO05D000385 1.6e-06 57.0 72 31.9
Sopen03g012270 Solanum pennellii HOM05D008041 ORTHO05D000385 1.6e-06 57.0 72 31.9
Sopen04g017170 Solanum pennellii HOM05D008041 ORTHO05D000385 1.6e-06 57.0 72 31.9
Sopen07g025660 Solanum pennellii HOM05D008041 ORTHO05D000385 1.6e-06 57.0 72 31.9
Sopen12g016000 Solanum pennellii HOM05D008041 ORTHO05D000385 1.6e-06 57.0 72 31.9
Solyc06g036805.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 2.1e-06 56.6 72 31.9
Solyc08g016677.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 2.1e-06 56.6 67 35.8
Solyc09g014641.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 2.1e-06 56.6 72 31.9
Sopen01g006470 Solanum pennellii HOM05D008041 ORTHO05D000385 2.1e-06 56.6 72 31.9
Solyc02g081085.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 2.8e-06 56.2 71 33.8
Solyc10g061845.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 2.8e-06 56.2 72 31.9
Solyc11g065205.1 Solanum lycopersicum HOM05D001309 ORTHO05D000385 2.8e-06 56.2 88 31.8
Psat2g138520 Pisum sativum HOM05D009811 ORTHO05D007166 6.2e-06 55.1 69 33.3
Solyc10g018713.1 Solanum lycopersicum HOM05D008041 ORTHO05D000385 6.2e-06 55.1 70 32.9
Sc08g0005540 Simmondsia chinensis HOM05D004615 ORTHO05D000385 8.0e-06 54.7 71 32.4
Sopen03g010950 Solanum pennellii HOM05D008041 ORTHO05D000385 8.0e-06 54.7 69 31.9
Sopen09g017170 Solanum pennellii HOM05D008041 ORTHO05D000385 8.0e-06 54.7 72 30.6


User provided reference genes

Program Settings