Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc07g0003350 Simmondsia chinensis HOM05D005167 ORTHO05D006312 2.4e-262 908.3 448 100.0
Sc07g0003360 Simmondsia chinensis HOM05D005167 ORTHO05D006312 2.4e-262 908.3 448 100.0
Hund15261 Selenicereus undatus HOM05D005167 ORTHO05D006312 1.1e-131 474.2 447 57.3
EL10Ac6g13938 Beta vulgaris HOM05D005167 ORTHO05D006312 1.3e-130 470.7 474 55.3
Ah.02g128610 Amaranthus hybridus HOM05D005167 ORTHO05D006312 1.1e-121 441.0 453 52.8
Hma1.2p1_0052F.1_g030120 Hydrangea macrophylla HOM05D005167 ORTHO05D006312 1.9e-115 420.2 466 51.3
CAN.G1379.23 Capsicum annuum HOM05D005167 ORTHO05D006312 4.8e-114 415.6 442 51.4
Nitab4.5_0004176g0010 Nicotiana tabacum HOM05D005167 ORTHO05D006312 4.8e-114 415.6 452 51.1
Nitab4.5_0001085g0040 Nicotiana tabacum HOM05D005167 ORTHO05D006312 6.2e-114 415.2 461 50.8
Dinv24548 Davidia involucrata HOM05D000457 ORTHO05D000560 1.1e-113 414.5 501 48.7
SalBow3G4053 Salvia bowleyana HOM05D005167 ORTHO05D006312 3.1e-113 412.9 443 52.1
Migut.N00879 Erythranthe guttata HOM05D005167 ORTHO05D006312 4.5e-112 409.1 420 50.7
Peaxi162Scf00194g00934 Petunia axillaris HOM05D005167 ORTHO05D006312 4.5e-112 409.1 458 49.8
QL02p104239 Quercus lobata HOM05D005167 ORTHO05D006312 1.0e-111 407.9 437 53.8
Sopen01g045080 Solanum pennellii HOM05D005167 ORTHO05D006312 1.7e-111 407.1 452 50.4
Solyc01g102670.3 Solanum lycopersicum HOM05D005167 ORTHO05D006312 1.4e-110 404.1 453 50.3
PGSC0003DMG400018222 Solanum tuberosum HOM05D005167 ORTHO05D006312 1.4e-110 404.1 455 50.8
Gohir.D05G124100 Gossypium hirsutum HOM05D005167 ORTHO05D006312 4.2e-110 402.5 435 51.7
Gorai.009G128100 Gossypium raimondii HOM05D005167 ORTHO05D006312 4.2e-110 402.5 442 51.8
arahy.Tifrunner.gnm1.ann1.JG47X3 Arachis hypogaea HOM05D005167 ORTHO05D006312 1.6e-109 400.6 462 50.4
Atru.chr6.56 Acer truncatum HOM05D005167 ORTHO05D006312 3.5e-109 399.4 447 52.8
Oeu000168.1 Olea europaea HOM05D005167 ORTHO05D006312 4.6e-109 399.1 419 52.7
Glyma.09G018700 Glycine max HOM05D005167 ORTHO05D006312 6.0e-109 398.7 437 51.0
arahy.Tifrunner.gnm1.ann1.T4BBUF Arachis hypogaea HOM05D005167 ORTHO05D006312 7.9e-109 398.3 457 50.3
SGA_v2.0_scaffold401G50971 Striga asiatica HOM05D005167 ORTHO05D006312 1.0e-108 397.9 445 49.9
ECA248G1565 Erigeron canadensis HOM05D005167 ORTHO05D006312 1.1e-107 394.4 431 50.8
Nn5g27095 Nelumbo nucifera HOM05D005167 ORTHO05D006312 2.5e-107 393.3 460 49.1
HanXRQChr15g0488451 Helianthus annuus HOM05D005167 ORTHO05D006312 3.3e-107 392.9 415 50.6
Lj9C241G5 Lonicera japonica HOM05D005167 ORTHO05D006312 5.7e-107 392.1 452 50.2
Lj6g0014124 Lotus japonicus HOM05D005167 ORTHO05D006312 1.6e-106 390.6 483 49.9
Ciclev10001110m.g Citrus clementina HOM05D005167 ORTHO05D006312 1.4e-105 387.5 453 50.1
Phvul.006G133500 Phaseolus vulgaris HOM05D005167 ORTHO05D006312 1.4e-105 387.5 437 49.2
Cc02_g36800 Coffea canephora HOM05D005167 ORTHO05D006312 3.1e-105 386.3 415 50.8
PGR042G3689 Punica granatum HOM05D005167 ORTHO05D006312 2.6e-104 383.3 456 48.5
DCAR_029460 Daucus carota HOM05D005167 ORTHO05D006312 3.4e-104 382.9 470 47.7
PSO170G3824 Papaver somniferum HOM05D005167 ORTHO05D006312 5.9e-104 382.1 420 51.7
Thecc.06G025200 Theobroma cacao HOM05D005167 ORTHO05D006312 5.9e-104 382.1 424 52.1
Haze_09951 Corylus avellana HOM05D005167 ORTHO05D006312 6.5e-103 378.6 471 48.2
Rhsim05G0120900 Rhododendron simsii HOM05D005167 ORTHO05D006312 8.5e-103 378.3 463 48.4
TWI23G0323 Tripterygium wilfordii HOM05D005167 ORTHO05D006312 2.5e-102 376.7 466 47.0
VMungo0540G0564 Vigna mungo HOM05D005167 ORTHO05D006312 2.1e-101 373.6 436 49.1
vmacro19812 Vaccinium macrocarpon HOM05D005167 ORTHO05D006312 2.2e-98 363.6 463 46.9
AUR62024866 Chenopodium quinoa HOM05D005167 ORTHO05D006312 6.3e-98 362.1 381 53.8
HPP92_025056 Vanilla planifolia HOM05D005167 ORTHO05D006312 3.4e-96 356.3 443 44.5
Gohir.A05G123200 Gossypium hirsutum HOM05D005167 ORTHO05D006312 3.8e-95 352.8 399 50.4
Os07g0657600 Oryza sativa ssp. japonica HOM05D005167 ORTHO05D006312 3.8e-95 352.8 436 46.1
Duzib160G0520 Durio zibethinus HOM05D005167 ORTHO05D006312 6.5e-95 352.1 397 51.6
CiPaw.09G096800 Carya illinoinensis HOM05D005167 ORTHO05D006312 1.2e-93 347.8 436 47.5
Manes.06G015900 Manihot esculenta HOM05D005167 ORTHO05D006312 7.9e-93 345.1 430 47.7
Potri.003G046300 Populus trichocarpa HOM05D005167 ORTHO05D006312 1.7e-90 337.4 443 46.7
CANSAT01G2096 Cannabis sativa HOM05D005167 ORTHO05D006312 6.3e-90 335.5 467 46.7
THA.LOC104809040 Tarenaya hassleriana HOM05D005167 ORTHO05D006312 2.2e-87 327.0 472 42.8
ATR0782G113 Amborella trichopoda HOM05D005167 ORTHO05D006312 1.1e-86 324.7 449 43.4
Sabra03G0019800 Salix brachista HOM05D005167 ORTHO05D006312 1.9e-86 323.9 467 45.0
Eucgr.G00036 Eucalyptus grandis HOM05D005167 ORTHO05D006312 2.9e-79 300.1 393 45.0
Actinidia12290 Actinidia chinensis HOM05D005167 ORTHO05D006312 9.4e-78 295.0 413 41.6
Thecc.07G187300 Theobroma cacao HOM05D005167 ORTHO05D006312 4.0e-76 289.7 403 42.4
Atru.chr6.45 Acer truncatum HOM05D005167 ORTHO05D006312 1.7e-74 284.3 421 45.6
Nn3g20631 Nelumbo nucifera HOM05D005167 ORTHO05D006312 1.0e-71 275.0 399 40.6
Duzib116G0260 Durio zibethinus HOM05D005167 ORTHO05D006312 1.6e-69 267.7 405 40.7
Dinv01746 Davidia involucrata HOM05D005167 ORTHO05D006312 1.4e-68 264.6 428 37.9
CiPaw.15G107300 Carya illinoinensis HOM05D005167 ORTHO05D006312 6.8e-68 262.3 401 40.1
Gohir.D09G002700 Gossypium hirsutum HOM05D005167 ORTHO05D006312 4.1e-65 253.1 416 38.0
C07p02160 Brassica napus HOM05D005167 ORTHO05D006312 3.5e-64 250.0 404 36.6
BolC7t40625H Brassica oleracea HOM05D005167 ORTHO05D006312 1.0e-63 248.4 404 36.4
Aqoxy4G01544 Aquilegia oxysepala HOM05D005167 ORTHO05D006312 1.7e-63 247.7 446 35.9
CARHR046110 Cardamine hirsuta HOM05D005167 ORTHO05D006312 1.7e-63 247.7 397 37.5
BcaB03g16877 Brassica carinata HOM05D005167 ORTHO05D006312 2.3e-63 247.3 396 36.6
A03p66890 Brassica napus HOM05D005167 ORTHO05D006312 2.3e-63 247.3 404 36.4
BraA01t02792Z Brassica rapa HOM05D005167 ORTHO05D006312 2.3e-63 247.3 404 36.4
SpUn0422_0010 Schrenkiella parvula HOM05D005167 ORTHO05D006312 8.6e-63 245.4 404 35.9
Carub.0003s3540 Capsella rubella HOM05D005167 ORTHO05D006312 1.1e-62 245.0 403 35.5
Cpa.g.sc15.42 Carica papaya HOM05D005167 ORTHO05D006312 1.5e-62 244.6 392 37.2
Thhalv10028036m.g Eutrema salsugineum HOM05D005167 ORTHO05D006312 2.1e-61 240.7 394 35.5
CANSAT64G2797 Cannabis sativa HOM05D005167 ORTHO05D006312 2.3e-60 237.3 391 37.3
QL93p0255_0001 Quercus lobata HOM05D005167 ORTHO05D006312 3.0e-60 236.9 320 48.4
Sed0010261 Sechium edule HOM05D005167 ORTHO05D006312 5.2e-60 236.1 400 37.8
FAN19G3173 Fragaria x ananassa HOM05D005167 ORTHO05D006312 8.9e-60 235.3 410 37.6
CiPaw.15G107200 Carya illinoinensis HOM05D005167 ORTHO05D006312 2.0e-59 234.2 352 40.3
FAN26G1264 Fragaria x ananassa HOM05D005167 ORTHO05D006312 3.4e-59 233.4 409 37.2
Atru.chr9.69 Acer truncatum HOM05D005167 ORTHO05D006312 1.3e-58 231.5 395 37.0
Oeu000169.3 Olea europaea HOM05D005167 ORTHO05D006312 1.7e-58 231.1 312 45.5
MD00G1096100 Malus domestica HOM05D005167 ORTHO05D006312 1.6e-56 224.6 411 38.7
Lju225A7G63 Lonicera japonica HOM05D005167 ORTHO05D006312 2.9e-55 220.3 419 35.6
SGA_v2.0_scaffold150G36624 Striga asiatica HOM05D005167 ORTHO05D006312 1.9e-54 217.6 417 33.8
ClCG04G000020 Citrullus lanatus HOM05D005167 ORTHO05D006312 5.6e-54 216.1 396 34.3
Lsat_1_v5_gn_8_167100 Lactuca sativa HOM05D005167 ORTHO05D006312 1.6e-53 214.5 403 35.2
ClCG08G000010 Citrullus lanatus HOM05D005167 ORTHO05D006312 2.1e-53 214.2 397 34.8
RcHm_v2.0_Chr3g0496761 Rosa chinensis HOM05D005167 ORTHO05D006312 2.1e-53 214.2 446 35.4
Glyma.13G026000 Glycine max HOM05D005167 ORTHO05D006312 1.0e-52 211.8 336 37.8
Manes.18G143300 Manihot esculenta HOM05D005167 ORTHO05D006312 2.3e-52 210.7 336 39.9
Gorai.006G003300 Gossypium raimondii HOM05D005167 ORTHO05D006312 4.0e-52 209.9 325 38.5
MBI17_g35115_MAGBIO Magnolia biondii HOM05D005167 ORTHO05D006312 5.2e-52 209.5 172 60.5
TAR629G0123 Trochodendron aralioides HOM05D005167 ORTHO05D006312 8.9e-52 208.8 370 37.0
Prupe.4G287800 Prunus persica HOM05D005167 ORTHO05D006312 9.2e-49 198.7 329 38.3
TWI31G1352 Tripterygium wilfordii HOM05D005167 ORTHO05D006312 2.0e-48 197.6 313 39.6
Ciclev10030405m.g Citrus clementina HOM05D005167 ORTHO05D006312 4.6e-48 196.4 359 37.0
Manes.18G143000 Manihot esculenta HOM05D005167 ORTHO05D006312 6.0e-48 196.1 396 32.1
CAN.G989.3 Capsicum annuum HOM05D005167 ORTHO05D006312 5.0e-47 193.0 334 34.7
BcaC08g44461 Brassica carinata HOM05D005167 ORTHO05D006312 6.6e-47 192.6 325 36.9
MELO3C034515.2 Cucumis melo HOM05D005167 ORTHO05D006312 4.3e-46 189.9 405 33.8
GSVIVG01029417001 Vitis vinifera HOM05D005167 ORTHO05D006312 1.2e-45 188.3 321 37.1
TWI15G0790 Tripterygium wilfordii HOM05D005167 ORTHO05D006312 1.6e-45 188.0 321 38.3
Gohir.A09G002900 Gossypium hirsutum HOM05D005167 ORTHO05D006312 3.6e-45 186.8 290 38.3
PGSC0003DMG400014526 Solanum tuberosum HOM05D005167 ORTHO05D006312 6.2e-45 186.0 388 31.2
AUR62032503 Chenopodium quinoa HOM05D005167 ORTHO05D000001 2.3e-44 184.1 341 39.6
Nitab4.5_0005690g0020 Nicotiana tabacum HOM05D005167 ORTHO05D006312 4.4e-43 179.9 335 34.6
Sopen02g001190 Solanum pennellii HOM05D005167 ORTHO05D006312 4.4e-43 179.9 351 33.0
Phvul.L001673 Phaseolus vulgaris HOM05D005167 ORTHO05D006312 8.3e-42 175.6 343 35.0
HanXRQChr12g0386151 Helianthus annuus HOM05D005167 ORTHO05D006312 4.1e-41 173.3 407 29.7
Cc00_g01280 Coffea canephora HOM05D005167 ORTHO05D006312 3.5e-40 170.2 335 32.5
Actinidia01647 Actinidia chinensis HOM05D005167 ORTHO05D006312 6.0e-40 169.5 121 66.1
COL.COLO4_11943 Corchorus olitorius HOM05D005167 ORTHO05D006312 1.0e-39 168.7 202 47.5
Lju225C0G3 Lonicera japonica HOM05D005167 ORTHO05D006312 5.6e-38 162.9 406 32.3
CDE02G4394 Ceratophyllum demersum HOM05D003845 ORTHO05D004161 1.2e-37 161.8 133 57.1
Nitab4.5_0001246g0010 Nicotiana tabacum HOM05D005167 ORTHO05D006312 1.2e-37 161.8 347 33.1
Nitab4.5_0007926g0020 Nicotiana tabacum HOM05D005167 ORTHO05D006312 1.2e-37 161.8 322 33.5
FvH4_1g27954 Fragaria vesca HOM05D005167 ORTHO05D006312 4.4e-35 153.3 189 46.0
C06p19120 Brassica napus HOM05D005167 ORTHO05D006312 7.6e-35 152.5 264 37.9
BolC6t37111H Brassica oleracea HOM05D005167 ORTHO05D006312 7.6e-35 152.5 264 37.9
QL07p001518 Quercus lobata HOM05D005167 ORTHO05D006312 1.3e-34 151.8 259 40.9
BcaC06g36613 Brassica carinata HOM05D005167 ORTHO05D006312 2.2e-34 151.0 251 36.3
Eucgr.B01586 Eucalyptus grandis HOM05D005167 ORTHO05D006312 1.1e-33 148.7 348 33.3
ECA234G3362 Erigeron canadensis HOM05D005167 ORTHO05D006312 5.4e-33 146.4 346 32.4
QL93p1868_0059 Quercus lobata HOM05D005167 ORTHO05D006312 5.4e-33 146.4 258 38.0
MBI17_g35871_MAGBIO Magnolia biondii HOM05D005167 ORTHO05D006312 1.7e-31 141.4 104 64.4
Gohir.D07G228750 Gossypium hirsutum HOM05D005167 ORTHO05D006312 1.1e-28 132.1 373 29.2
A07p01000 Brassica napus HOM05D005167 ORTHO05D006312 1.8e-28 131.3 171 41.5
CDE02G1408 Ceratophyllum demersum HOM05D005167 ORTHO05D006312 1.8e-28 131.3 140 50.0
QL01p052835 Quercus lobata HOM05D005167 ORTHO05D006312 5.2e-28 129.8 128 51.6
QL93p1868_0064 Quercus lobata HOM05D005167 ORTHO05D006312 1.5e-27 128.3 128 50.8
BcaC06g31947 Brassica carinata HOM05D005167 ORTHO05D006312 2.0e-27 127.9 259 32.0
QL01p053234 Quercus lobata HOM05D005167 ORTHO05D006312 5.8e-27 126.3 258 35.3
Gorai.001G263800 Gossypium raimondii HOM05D005167 ORTHO05D006312 2.4e-25 120.9 361 29.1
Thhalv10028065m.g Eutrema salsugineum HOM05D005167 ORTHO05D006312 5.4e-25 119.8 144 42.4
HanXRQChr12g0378911 Helianthus annuus HOM05D005167 ORTHO05D006312 1.4e-20 105.1 144 36.8
SpUn0005_0090 Schrenkiella parvula HOM05D005167 ORTHO05D006312 4.0e-20 103.6 121 43.0
Eucgr.B01611 Eucalyptus grandis HOM05D005167 ORTHO05D006312 4.9e-18 96.7 104 49.0
Aqoxy4G01501 Aquilegia oxysepala HOM05D005167 ORTHO05D006312 1.6e-16 91.7 161 37.3
Dinv42629 Davidia involucrata HOM05D005167 ORTHO05D006312 1.6e-16 91.7 81 53.1
PGSC0003DMG400040448 Solanum tuberosum HOM05D005167 ORTHO05D006312 6.0e-16 89.7 110 41.8
Atru.chr9.63 Acer truncatum HOM05D005167 ORTHO05D006312 1.0e-15 89.0 105 42.9
Gohir.A12G103850 Gossypium hirsutum HOM05D005167 ORTHO05D006312 2.3e-15 87.8 130 42.3
BcaC06g31946 Brassica carinata HOM05D005167 ORTHO05D006312 3.4e-11 73.9 285 22.5
ECA232G3819 Erigeron canadensis HOM05D007651 ORTHO05D000898 5.1e-07 60.1 65 44.6
Nn2g11162 Nelumbo nucifera HOM05D000080 ORTHO05D000053 6.7e-07 59.7 42 61.9
COL.COLO4_16251 Corchorus olitorius HOM05D005167 ORTHO05D006312 8.7e-07 59.3 73 47.9
Rhsim04G0168400 Rhododendron simsii HOM05D000018 ORTHO05D008577 2.5e-06 57.8 72 43.1


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