Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc07g0002970 Simmondsia chinensis HOM05D006364 ORTHO05D007968 1.9e-30 135.2 67 100.0
Duzib151G1172 Durio zibethinus HOM05D006364 ORTHO05D007968 1.0e-28 129.4 66 95.5
QL06p013601 Quercus lobata HOM05D006364 ORTHO05D007968 1.3e-28 129.0 66 92.4
THA.LOC104820323 Tarenaya hassleriana HOM05D006364 ORTHO05D007968 1.7e-28 128.6 66 93.9
Duzib212G0576 Durio zibethinus HOM05D006364 ORTHO05D007968 2.3e-28 128.3 66 93.9
Gohir.A02G086100 Gossypium hirsutum HOM05D006364 ORTHO05D007968 2.3e-28 128.3 66 93.9
Gohir.D02G062300 Gossypium hirsutum HOM05D006364 ORTHO05D007968 2.3e-28 128.3 66 93.9
Gorai.005G070100 Gossypium raimondii HOM05D006364 ORTHO05D007968 2.3e-28 128.3 66 93.9
Thecc.04G308800 Theobroma cacao HOM05D006364 ORTHO05D007968 2.3e-28 128.3 66 93.9
Rhsim02G0000900 Rhododendron simsii HOM05D006364 ORTHO05D007968 3.0e-28 127.9 66 90.9
GSVIVG01017645001 Vitis vinifera HOM05D006364 ORTHO05D007968 3.0e-28 127.9 66 92.4
Cpa.g.sc146.52 Carica papaya HOM05D006364 ORTHO05D007968 5.1e-28 127.1 66 92.4
Cc03_g00390 Coffea canephora HOM05D006364 ORTHO05D007968 6.6e-28 126.7 66 92.4
Nn3g21850 Nelumbo nucifera HOM05D006364 ORTHO05D007968 6.6e-28 126.7 66 90.9
CSS0027206 Camellia sinensis var. sinensis HOM05D006364 ORTHO05D007968 8.7e-28 126.3 66 90.9
EL10Ac1g00595 Beta vulgaris HOM05D006364 ORTHO05D007968 1.1e-27 125.9 66 90.9
Dinv15615 Davidia involucrata HOM05D006364 ORTHO05D007968 1.1e-27 125.9 66 90.9
Dinv29542 Davidia involucrata HOM05D006364 ORTHO05D007968 1.1e-27 125.9 67 91.0
Actinidia02518 Actinidia chinensis HOM05D006364 ORTHO05D007968 1.5e-27 125.6 66 90.9
Ah.05g176740 Amaranthus hybridus HOM05D006364 ORTHO05D007968 1.9e-27 125.2 67 91.0
CAN.G175.13 Capsicum annuum HOM05D006364 ORTHO05D007968 1.9e-27 125.2 66 89.4
Lsat_1_v5_gn_6_117381 Lactuca sativa HOM05D006364 ORTHO05D007968 1.9e-27 125.2 66 89.4
MELO3C006742.2 Cucumis melo HOM05D006364 ORTHO05D007968 2.5e-27 124.8 66 87.9
Glyma.15G136600 Glycine max HOM05D006364 ORTHO05D007968 2.5e-27 124.8 65 90.8
Nitab4.5_0000152g0370 Nicotiana tabacum HOM05D006364 ORTHO05D007968 2.5e-27 124.8 66 89.4
Nitab4.5_0003130g0060 Nicotiana tabacum HOM05D006364 ORTHO05D007968 2.5e-27 124.8 66 89.4
Prupe.1G110000 Prunus persica HOM05D006364 ORTHO05D007968 2.5e-27 124.8 66 90.9
Solyc04g071180.3 Solanum lycopersicum HOM05D006364 ORTHO05D007968 2.5e-27 124.8 66 89.4
Sopen04g027130 Solanum pennellii HOM05D006364 ORTHO05D007968 2.5e-27 124.8 66 89.4
COL.COLO4_34533 Corchorus olitorius HOM05D006364 ORTHO05D007968 5.6e-27 123.6 66 90.9
CsaV3_3G015430 Cucumis sativus L. HOM05D006364 ORTHO05D007968 7.3e-27 123.2 66 86.4
TWI73G0896 Tripterygium wilfordii HOM05D006364 ORTHO05D007968 7.3e-27 123.2 66 89.4
Actinidia31587 Actinidia chinensis HOM05D006364 ORTHO05D007968 9.6e-27 122.9 66 89.4
CAN.G689.14 Capsicum annuum HOM05D006364 ORTHO05D007968 9.6e-27 122.9 66 87.9
HanXRQChr09g0252081 Helianthus annuus HOM05D006364 ORTHO05D007968 9.6e-27 122.9 66 89.4
MSTRG.26303 Avicennia marina HOM05D006364 ORTHO05D007968 1.3e-26 122.5 66 87.9
Hma1.2p1_0013F.1_g008050 Hydrangea macrophylla HOM05D006364 ORTHO05D007968 1.3e-26 122.5 66 87.9
Phvul.006G121400 Phaseolus vulgaris HOM05D006364 ORTHO05D007968 1.3e-26 122.5 66 87.9
Peaxi162Scf00126g01328 Petunia axillaris HOM05D006364 ORTHO05D007968 1.6e-26 122.1 66 87.9
Potri.008G100400 Populus trichocarpa HOM05D006364 ORTHO05D007968 1.6e-26 122.1 66 89.4
Potri.010G152100 Populus trichocarpa HOM05D006364 ORTHO05D007968 1.6e-26 122.1 66 89.4
Hund19242 Selenicereus undatus HOM05D006364 ORTHO05D007968 1.6e-26 122.1 66 87.9
CDE11G0289 Ceratophyllum demersum HOM05D006364 ORTHO05D007968 2.1e-26 121.7 66 84.8
RcHm_v2.0_Chr4g0426541 Rosa chinensis HOM05D006364 ORTHO05D007968 2.1e-26 121.7 66 84.8
CSS0032087 Camellia sinensis var. sinensis HOM05D006364 ORTHO05D007968 2.8e-26 121.3 66 89.4
MD16G1140400 Malus domestica HOM05D006364 ORTHO05D007968 2.8e-26 121.3 65 87.7
AL3G30350 Arabidopsis lyrata HOM05D006364 ORTHO05D007968 3.6e-26 120.9 66 86.4
AT3G17300 Arabidopsis thaliana HOM05D006364 ORTHO05D007968 3.6e-26 120.9 66 86.4
Carub.0003s1701 Capsella rubella HOM05D006364 ORTHO05D007968 3.6e-26 120.9 66 86.4
AUR62034532 Chenopodium quinoa HOM05D000862 ORTHO05D000943 3.6e-26 120.9 66 86.4
arahy.Tifrunner.gnm1.ann1.28BCJ9 Arachis hypogaea HOM05D006364 ORTHO05D007968 4.8e-26 120.6 65 87.7
arahy.Tifrunner.gnm1.ann1.8W9CKH Arachis hypogaea HOM05D006364 ORTHO05D007968 4.8e-26 120.6 65 87.7
arahy.Tifrunner.gnm1.ann1.ZVI86Q Arachis hypogaea HOM05D006364 ORTHO05D007968 4.8e-26 120.6 65 87.7
PGSC0003DMG400008613 Solanum tuberosum HOM05D006364 ORTHO05D007968 4.8e-26 120.6 66 84.8
Haze_00814 Corylus avellana HOM05D006364 ORTHO05D007968 6.2e-26 120.2 66 87.9
Lalb_Chr18g0058441 Lupinus albus HOM05D006364 ORTHO05D007968 8.1e-26 119.8 66 86.4
AUR62014465 Chenopodium quinoa HOM05D000862 ORTHO05D000943 1.1e-25 119.4 66 84.8
Glyma.09G031500 Glycine max HOM05D006364 ORTHO05D007968 1.1e-25 119.4 66 84.8
Sed0012877 Sechium edule HOM05D006364 ORTHO05D007968 1.4e-25 119.0 66 84.8
HPP92_017027 Vanilla planifolia HOM05D006364 ORTHO05D007968 1.4e-25 119.0 66 83.3
ECA246G0645 Erigeron canadensis HOM05D006364 ORTHO05D007968 1.8e-25 118.6 66 84.8
Sp3g15490 Schrenkiella parvula HOM05D006364 ORTHO05D007968 1.8e-25 118.6 66 84.8
Sed0013937 Sechium edule HOM05D006364 ORTHO05D007968 1.8e-25 118.6 66 84.8
CiPaw.01G113600 Carya illinoinensis HOM05D006364 ORTHO05D007968 3.1e-25 117.9 66 86.4
Medtr2g032700 Medicago truncatula HOM05D006364 ORTHO05D007968 3.1e-25 117.9 66 80.3
DCAR_026961 Daucus carota HOM05D006364 ORTHO05D007968 4.0e-25 117.5 65 84.6
CARHR092600 Cardamine hirsuta HOM05D006364 ORTHO05D007968 5.3e-25 117.1 66 81.8
Migut.B01021 Erythranthe guttata HOM05D006364 ORTHO05D007968 5.3e-25 117.1 66 83.3
Migut.N00017 Erythranthe guttata HOM05D006364 ORTHO05D007968 5.3e-25 117.1 66 83.3
Eucgr.H04093 Eucalyptus grandis HOM05D006364 ORTHO05D007968 5.3e-25 117.1 66 83.3
FvH4_4g21000 Fragaria vesca HOM05D006364 ORTHO05D007968 5.3e-25 117.1 66 81.8
FAN12G1354 Fragaria x ananassa HOM05D000037 ORTHO05D001684 5.3e-25 117.1 66 81.8
TWI09G0430 Tripterygium wilfordii HOM05D006364 ORTHO05D007968 5.3e-25 117.1 65 87.7
Aa31LG8G4220 Aethionema arabicum HOM05D006364 ORTHO05D007968 6.9e-25 116.7 66 80.3
CANSAT78G0762 Cannabis sativa HOM05D006364 ORTHO05D007968 1.2e-24 115.9 66 83.3
Lalb_Chr20g0120331 Lupinus albus HOM05D006364 ORTHO05D007968 1.2e-24 115.9 66 83.3
unitig_22.g5765 Utricularia gibba HOM05D006364 ORTHO05D007968 1.5e-24 115.5 66 84.8
Lj6g0013185 Lotus japonicus HOM05D006364 ORTHO05D007968 2.0e-24 115.2 66 83.3
Psat1g163400 Pisum sativum HOM05D006364 ORTHO05D007968 2.0e-24 115.2 66 80.3
BcaB04g18937 Brassica carinata HOM05D006364 ORTHO05D007968 2.6e-24 114.8 66 81.8
BcaB04g20848 Brassica carinata HOM05D006364 ORTHO05D007968 2.6e-24 114.8 66 81.8
BcaC09g48691 Brassica carinata HOM05D006364 ORTHO05D007968 2.6e-24 114.8 66 81.8
A01p37010 Brassica napus HOM05D006364 ORTHO05D007968 2.6e-24 114.8 66 81.8
A03p40140 Brassica napus HOM05D006364 ORTHO05D007968 2.6e-24 114.8 66 81.8
C01p46890 Brassica napus HOM05D006364 ORTHO05D007968 2.6e-24 114.8 66 81.8
BolC1t04661H Brassica oleracea HOM05D006364 ORTHO05D007968 2.6e-24 114.8 66 81.8
BraA01t03762Z Brassica rapa HOM05D006364 ORTHO05D007968 2.6e-24 114.8 66 81.8
BraA03t13164Z Brassica rapa HOM05D006364 ORTHO05D007968 2.6e-24 114.8 66 81.8
Thhalv10021841m.g Eutrema salsugineum HOM05D006364 ORTHO05D007968 2.6e-24 114.8 66 81.8
SHI21779 Sapria himalayana HOM05D006364 ORTHO05D007968 2.6e-24 114.8 66 84.8
Zm00001eb028690 Zea mays HOM05D006364 ORTHO05D007968 2.6e-24 114.8 66 81.8
Aqoxy2G02602 Aquilegia oxysepala HOM05D006364 ORTHO05D007968 4.5e-24 114.0 66 83.3
BcaC01g03770 Brassica carinata HOM05D006364 ORTHO05D007968 5.8e-24 113.6 66 80.3
Lj7E712T1 Lonicera japonica HOM05D006364 ORTHO05D007968 5.8e-24 113.6 61 85.2
BcaC01g03776 Brassica carinata HOM05D006364 ORTHO05D007968 9.9e-24 112.8 66 80.3
C03p48710 Brassica napus HOM05D006364 ORTHO05D007968 9.9e-24 112.8 66 80.3
C03p48760 Brassica napus HOM05D006364 ORTHO05D007968 9.9e-24 112.8 66 80.3
BolC3t17152H Brassica oleracea HOM05D006364 ORTHO05D007968 9.9e-24 112.8 66 80.3
TPR.G30811 Trifolium pratense HOM05D006364 ORTHO05D007968 9.9e-24 112.8 66 80.3
Zm00001eb418900 Zea mays HOM05D006364 ORTHO05D007968 1.3e-23 112.5 66 80.3
PGR004G1259 Punica granatum HOM05D006364 ORTHO05D007968 1.7e-23 112.1 66 80.3
Os12g0566100 Oryza sativa ssp. japonica HOM05D006364 ORTHO05D007968 8.4e-23 109.8 66 75.8
Rhsim04G0245400 Rhododendron simsii HOM05D006364 ORTHO05D007968 1.2e-21 105.9 109 54.1
Zm00001eb193610 Zea mays HOM05D006364 ORTHO05D007968 7.9e-21 103.2 60 80.0
AUR62036805 Chenopodium quinoa HOM05D000862 ORTHO05D000943 1.0e-20 102.8 102 55.9
PSO210G6302 Papaver somniferum HOM05D006364 ORTHO05D007968 3.0e-20 101.3 65 72.3
PSO761G0417 Papaver somniferum HOM05D006364 ORTHO05D007968 3.0e-20 101.3 65 72.3
Hund17201 Selenicereus undatus HOM05D000862 ORTHO05D000943 3.0e-20 101.3 89 62.9
ClCG05G006780 Citrullus lanatus HOM05D006364 ORTHO05D007968 9.0e-17 89.7 118 48.3
Manes.03G210000 Manihot esculenta HOM05D006364 ORTHO05D007968 5.8e-16 87.0 66 68.2
MBI18_g09661_MAGBIO Magnolia biondii HOM05D006364 ORTHO05D007968 8.4e-15 83.2 96 55.2
Cfa015704 Carpinus fangiana HOM05D006364 ORTHO05D007968 1.9e-14 82.0 67 68.7
MD13G1146500 Malus domestica HOM05D006364 ORTHO05D007968 4.6e-13 77.4 56 71.4
SalBow4G1453 Salvia bowleyana HOM05D006364 ORTHO05D007968 1.3e-12 75.9 66 59.1
vmacro07987 Vaccinium macrocarpon HOM05D006364 ORTHO05D007968 1.5e-11 72.4 193 30.6
Zm00001eb224320 Zea mays HOM05D006364 ORTHO05D007968 2.5e-11 71.6 43 76.7
Pp3c26_11720 Physcomitrium patens HOM05D006364 ORTHO05D007968 4.8e-10 67.4 61 49.2
SMO196G0146 Selaginella moellendorffii HOM05D006364 ORTHO05D007968 4.8e-10 67.4 50 56.0
AagrBONN_evm.TU.Sc2ySwM_368.2196 Anthoceros agrestis HOM05D006364 ORTHO05D007968 8.2e-10 66.6 62 51.6
SGA_v2.0_scaffold449G51796 Striga asiatica HOM05D006364 ORTHO05D007968 9.0e-09 63.2 62 59.7
EL10Ac3g06351 Beta vulgaris HOM05D006364 ORTHO05D007968 4.5e-08 60.8 34 79.4
Actinidia07522 Actinidia chinensis HOM05D006364 ORTHO05D007968 1.7e-07 58.9 43 67.4
Zm00001eb137950 Zea mays HOM05D006364 ORTHO05D007968 1.7e-07 58.9 30 90.0
SalBow6G4934 Salvia bowleyana HOM05D006364 ORTHO05D007968 8.4e-07 56.6 71 43.7


User provided reference genes

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