Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc07g0002440 Simmondsia chinensis HOM05D013236 ORTHO05D007254 1.6e-66 255.8 116 100.0
Sc19g0003070 Simmondsia chinensis HOM05D013236 ORTHO05D007254 7.0e-17 90.9 77 50.6
Sc20g0000530 Simmondsia chinensis HOM05D013236 ORTHO05D007254 1.8e-09 66.2 74 41.9
CSS0012014 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.3e-07 59.3 73 45.2
Lj3g0002323 Lotus japonicus HOM05D000003 ORTHO05D007254 2.9e-07 58.9 90 34.4
Lj2g0023892 Lotus japonicus HOM05D000003 ORTHO05D007254 3.8e-07 58.5 72 40.3
vmacro21152 Vaccinium macrocarpon HOM05D003664 ORTHO05D003077 8.6e-07 57.4 78 41.0
CSS0013917 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.5e-06 56.6 94 37.2
Lj5g0017569 Lotus japonicus HOM05D000003 ORTHO05D007254 1.9e-06 56.2 72 37.5
Sc05g0006150 Simmondsia chinensis HOM05D013236 ORTHO05D007254 1.9e-06 56.2 79 34.2
CSS0007562 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.5e-06 55.8 71 40.8
Sc12g0003340 Simmondsia chinensis HOM05D008183 ORTHO05D007254 4.2e-06 55.1 73 38.4
arahy.Tifrunner.gnm1.ann1.0Y1AJC Arachis hypogaea HOM05D027442 ORTHO05D000167 5.5e-06 54.7 73 34.2
arahy.Tifrunner.gnm1.ann1.MHV6FT Arachis hypogaea HOM05D027442 ORTHO05D007254 5.5e-06 54.7 73 34.2
CSS0036610 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D007254 7.2e-06 54.3 90 37.8


User provided reference genes

Program Settings