Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc06g0010930 Simmondsia chinensis HOM05D022636 ORTHO05D388020 2.1e-132 475.7 237 100.0
Sc06g0010980 Simmondsia chinensis HOM05D022636 ORTHO05D388429 6.0e-132 474.2 237 99.6
Sc16g0004630 Simmondsia chinensis HOM05D022636 ORTHO05D389257 3.1e-27 126.3 90 67.8
Sc14g0003420 Simmondsia chinensis HOM05D022636 ORTHO05D387562 4.2e-16 89.4 171 34.5
Sc13g0007180 Simmondsia chinensis HOM05D003564 ORTHO05D005332 1.4e-11 74.3 97 46.4
Hund11987 Selenicereus undatus HOM05D003564 ORTHO05D005332 2.0e-10 70.5 97 43.3
Actinidia13349 Actinidia chinensis HOM05D003564 ORTHO05D005332 1.7e-09 67.4 77 48.1
AUR62039254 Chenopodium quinoa HOM05D003564 ORTHO05D005332 1.7e-09 67.4 97 41.2
Migut.N00033 Erythranthe guttata HOM05D003564 ORTHO05D005332 1.7e-09 67.4 97 42.3
Sc05g0006130 Simmondsia chinensis HOM05D022636 ORTHO05D388436 1.7e-09 67.4 96 44.8
Ah.07g201490 Amaranthus hybridus HOM05D003564 ORTHO05D005332 2.2e-09 67.0 77 45.5
MELO3C006726.2 Cucumis melo HOM05D003564 ORTHO05D005332 2.2e-09 67.0 97 42.3
CsaV3_3G015300 Cucumis sativus L. HOM05D003564 ORTHO05D005332 2.2e-09 67.0 97 42.3
Dinv44265 Davidia involucrata HOM05D003564 ORTHO05D005332 2.2e-09 67.0 97 42.3
Manes.03G206800 Manihot esculenta HOM05D003564 ORTHO05D005332 2.9e-09 66.6 97 41.2
EL10Ac3g05000 Beta vulgaris HOM05D003564 ORTHO05D005332 3.8e-09 66.2 97 40.2
Lj6A693T63 Lonicera japonica HOM05D003564 ORTHO05D005332 3.8e-09 66.2 97 41.2
TWI09G1018 Tripterygium wilfordii HOM05D003564 ORTHO05D005332 4.9e-09 65.9 77 46.8
Haze_01331 Corylus avellana HOM05D003564 ORTHO05D005332 6.4e-09 65.5 97 41.2
Haze_01336 Corylus avellana HOM05D003564 ORTHO05D005332 6.4e-09 65.5 97 41.2
Manes.15G001800 Manihot esculenta HOM05D003564 ORTHO05D005332 6.4e-09 65.5 97 40.2
AUR62016236 Chenopodium quinoa HOM05D003564 ORTHO05D005332 8.4e-09 65.1 97 39.2
Potri.010G148100 Populus trichocarpa HOM05D003564 ORTHO05D005332 8.4e-09 65.1 97 40.2
Sed0008581 Sechium edule HOM05D003564 ORTHO05D005332 8.4e-09 65.1 97 41.2
Potri.008G102800 Populus trichocarpa HOM05D003564 ORTHO05D005332 1.1e-08 64.7 77 45.5
CiPaw.02G073000 Carya illinoinensis HOM05D003564 ORTHO05D005332 1.4e-08 64.3 97 41.2
ClCG05G006670 Citrullus lanatus HOM05D003564 ORTHO05D005332 1.4e-08 64.3 97 40.2
Lj3A833G36 Lonicera japonica HOM05D003564 ORTHO05D005332 1.4e-08 64.3 97 40.2
Oeu001157.1 Olea europaea HOM05D003564 ORTHO05D005332 1.4e-08 64.3 97 39.2
Sed0006353 Sechium edule HOM05D003564 ORTHO05D005332 1.4e-08 64.3 97 40.2
SGA_v2.0_scaffold367G50068 Striga asiatica HOM05D003564 ORTHO05D005332 1.4e-08 64.3 77 45.5
MSTRG.21761 Avicennia marina HOM05D003564 ORTHO05D005332 1.9e-08 63.9 97 40.2
Duzib212G0473 Durio zibethinus HOM05D003564 ORTHO05D005332 1.9e-08 63.9 97 40.2
Rhsim02G0002600 Rhododendron simsii HOM05D003564 ORTHO05D005332 1.9e-08 63.9 96 42.7
Oeu046580.1 Olea europaea HOM05D003564 ORTHO05D005332 2.4e-08 63.5 97 39.2
TWI73G0893 Tripterygium wilfordii HOM05D003564 ORTHO05D005332 2.4e-08 63.5 77 45.5
MSTRG.24826 Avicennia marina HOM05D003564 ORTHO05D005332 3.2e-08 63.2 97 40.2
PGR004G2289 Punica granatum HOM05D003564 ORTHO05D005332 3.2e-08 63.2 97 40.2
Aqoxy2G02668 Aquilegia oxysepala HOM05D003564 ORTHO05D005332 4.2e-08 62.8 97 39.2
Sabra10G0114300 Salix brachista HOM05D003564 ORTHO05D005332 4.2e-08 62.8 97 38.1
CANSAT78G0776 Cannabis sativa HOM05D003564 ORTHO05D005332 5.4e-08 62.4 97 38.1
COL.COLO4_34584 Corchorus olitorius HOM05D003564 ORTHO05D005332 5.4e-08 62.4 97 40.2
Eucgr.H04065 Eucalyptus grandis HOM05D003564 ORTHO05D005332 5.4e-08 62.4 97 39.2
Nitab4.5_0000647g0260 Nicotiana tabacum HOM05D003564 ORTHO05D005332 7.1e-08 62.0 102 37.3
Os03g0832600 Oryza sativa ssp. japonica HOM05D003564 ORTHO05D005332 7.1e-08 62.0 97 39.2
Sabra08G0077700 Salix brachista HOM05D003564 ORTHO05D005332 7.1e-08 62.0 91 40.7
unitig_22.g6346 Utricularia gibba HOM05D003564 ORTHO05D005332 7.1e-08 62.0 97 38.1
unitig_8.g3092 Utricularia gibba HOM05D001060 ORTHO05D000905 7.1e-08 62.0 97 39.2
Actinidia18464 Actinidia chinensis HOM05D003564 ORTHO05D005332 9.3e-08 61.6 97 39.2
DCAR_026993 Daucus carota HOM05D003564 ORTHO05D005332 9.3e-08 61.6 71 46.5
Ca_21413_v3 Cicer arietinum L. HOM05D003564 ORTHO05D005332 1.2e-07 61.2 97 40.2
MD13G1150000 Malus domestica HOM05D003564 ORTHO05D005332 1.2e-07 61.2 97 38.1
GSVIVG01034964001 Vitis vinifera HOM05D003564 ORTHO05D005332 1.2e-07 61.2 97 39.2
CANSAT21G1208 Cannabis sativa HOM05D003564 ORTHO05D005332 1.6e-07 60.8 97 38.1
CiPaw.01G136200 Carya illinoinensis HOM05D003564 ORTHO05D005332 1.6e-07 60.8 97 39.2
ECA246G5316 Erigeron canadensis HOM05D003564 ORTHO05D005332 1.6e-07 60.8 97 39.2
Gohir.A09G241000 Gossypium hirsutum HOM05D003564 ORTHO05D005332 1.6e-07 60.8 97 38.1
Lalb_Chr07g0181971 Lupinus albus HOM05D003564 ORTHO05D005332 1.6e-07 60.8 97 39.2
Nitab4.5_0004165g0030 Nicotiana tabacum HOM05D003564 ORTHO05D005332 1.6e-07 60.8 97 37.1
arahy.Tifrunner.gnm1.ann1.5PE0GF Arachis hypogaea HOM05D003564 ORTHO05D005332 2.1e-07 60.5 88 42.0
Cfa015286 Carpinus fangiana HOM05D003564 ORTHO05D005332 2.1e-07 60.5 97 40.2
Lj6g0012179 Lotus japonicus HOM05D003564 ORTHO05D005332 2.1e-07 60.5 97 37.1
Thecc.04G304400 Theobroma cacao HOM05D003564 ORTHO05D005332 2.1e-07 60.5 97 38.1
TAR362G0511 Trochodendron aralioides HOM05D003564 ORTHO05D005332 2.1e-07 60.5 97 38.1
arahy.Tifrunner.gnm1.ann1.W3XDQ4 Arachis hypogaea HOM05D003564 ORTHO05D005332 2.7e-07 60.1 97 39.2
PSO421G0363 Papaver somniferum HOM05D003564 ORTHO05D005332 2.7e-07 60.1 97 38.1
PSO673G0015 Papaver somniferum HOM05D003564 ORTHO05D005332 2.7e-07 60.1 97 38.1
QL06p012801 Quercus lobata HOM05D003564 ORTHO05D005332 2.7e-07 60.1 97 38.1
vmacro07948 Vaccinium macrocarpon HOM05D003564 ORTHO05D005332 2.7e-07 60.1 77 44.2
Ciclev10004815m.g Citrus clementina HOM05D003564 ORTHO05D005332 3.5e-07 59.7 77 41.6
DCAR_023360 Daucus carota HOM05D003564 ORTHO05D005332 3.5e-07 59.7 79 43.0
Glyma.17G035800 Glycine max HOM05D003564 ORTHO05D005332 3.5e-07 59.7 97 39.2
Hma1.2p1_0013F.1_g008310 Hydrangea macrophylla HOM05D003564 ORTHO05D005332 3.5e-07 59.7 97 38.1
Medtr4g122670 Medicago truncatula HOM05D003564 ORTHO05D005332 3.5e-07 59.7 97 39.2
SalBow5G4452 Salvia bowleyana HOM05D003564 ORTHO05D005332 3.5e-07 59.7 98 39.8
TAR633G1064 Trochodendron aralioides HOM05D003564 ORTHO05D005332 3.5e-07 59.7 97 38.1
CSS0008875 Camellia sinensis var. sinensis HOM05D003564 ORTHO05D005332 4.6e-07 59.3 97 39.2
Lalb_Chr12g0200801 Lupinus albus HOM05D003564 ORTHO05D005332 4.6e-07 59.3 97 39.2
Oeu027343.1 Olea europaea HOM05D003564 ORTHO05D005332 4.6e-07 59.3 97 37.1
Dinv15142 Davidia involucrata HOM05D003564 ORTHO05D005332 6.0e-07 58.9 82 43.9
Gohir.D09G241800 Gossypium hirsutum HOM05D003564 ORTHO05D005332 6.0e-07 58.9 97 37.1
Gorai.006G265300 Gossypium raimondii HOM05D003564 ORTHO05D005332 6.0e-07 58.9 97 37.1
Psat4g021800 Pisum sativum HOM05D003564 ORTHO05D005332 6.0e-07 58.9 97 39.2
TPR.G25421 Trifolium pratense HOM05D003564 ORTHO05D005332 6.0e-07 58.9 97 39.2
Glyma.07G237700 Glycine max HOM05D003564 ORTHO05D005332 7.9e-07 58.5 97 38.1
HanXRQChr05g0146131 Helianthus annuus HOM05D003564 ORTHO05D005332 7.9e-07 58.5 97 39.2
CANSAT80G1613 Cannabis sativa HOM05D003564 ORTHO05D005332 1.0e-06 58.2 94 36.2
Peaxi162Scf00164g00106 Petunia axillaris HOM05D003564 ORTHO05D005332 1.0e-06 58.2 97 38.1
THA.LOC104818876 Tarenaya hassleriana HOM05D003564 ORTHO05D005332 1.0e-06 58.2 97 37.1
CSS0022249 Camellia sinensis var. sinensis HOM05D003564 ORTHO05D005332 1.7e-06 57.4 97 38.1
Peaxi162Scf00228g00614 Petunia axillaris HOM05D003564 ORTHO05D005332 1.7e-06 57.4 86 40.7
PGR031G2439 Punica granatum HOM05D003564 ORTHO05D005332 1.7e-06 57.4 97 37.1
Rhsim04G0241100 Rhododendron simsii HOM05D003564 ORTHO05D005332 1.7e-06 57.4 97 38.1
Zm00001eb063430 Zea mays HOM05D003564 ORTHO05D005332 1.7e-06 57.4 77 41.6
PSO724G1094 Papaver somniferum HOM05D003564 ORTHO05D005332 2.3e-06 57.0 97 37.1
Nn3g21762 Nelumbo nucifera HOM05D003564 ORTHO05D005332 3.0e-06 56.6 97 37.1
Phvul.003G116700 Phaseolus vulgaris HOM05D003564 ORTHO05D005332 3.0e-06 56.6 97 37.1
ATR0693G053 Amborella trichopoda HOM05D003564 ORTHO05D005332 3.9e-06 56.2 77 41.6
CAN.G281.5 Capsicum annuum HOM05D003564 ORTHO05D005332 3.9e-06 56.2 88 40.9
FAN07G2223 Fragaria x ananassa HOM05D003564 ORTHO05D005332 3.9e-06 56.2 77 41.6
Hma1.2p1_0078F.1_g039870 Hydrangea macrophylla HOM05D003564 ORTHO05D005332 3.9e-06 56.2 98 38.8
PSO210G4867 Papaver somniferum HOM05D003564 ORTHO05D005332 3.9e-06 56.2 97 37.1
VMungo1215G0911 Vigna mungo HOM05D003564 ORTHO05D005332 3.9e-06 56.2 97 37.1
Solyc01g058390.3 Solanum lycopersicum HOM05D003564 ORTHO05D005332 5.1e-06 55.8 77 41.6
Sopen01g023960 Solanum pennellii HOM05D003564 ORTHO05D005332 5.1e-06 55.8 77 41.6
Lsat_1_v5_gn_6_116000 Lactuca sativa HOM05D003564 ORTHO05D005332 6.6e-06 55.5 97 37.1
Nitab4.5_0000655g0040 Nicotiana tabacum HOM05D003564 ORTHO05D005332 6.6e-06 55.5 77 42.9
Nitab4.5_0005111g0010 Nicotiana tabacum HOM05D003564 ORTHO05D005332 6.6e-06 55.5 77 42.9
Prupe.1G114000 Prunus persica HOM05D003564 ORTHO05D005332 6.6e-06 55.5 75 42.7
FvH4_4g20200 Fragaria vesca HOM05D003564 ORTHO05D005332 8.7e-06 55.1 88 39.8


User provided reference genes

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