Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc06g0010750 Simmondsia chinensis HOM05D005739 ORTHO05D007740 3.8e-171 604.7 304 100.0
Atru.chr10.2176 Acer truncatum HOM05D005739 ORTHO05D007740 2.7e-121 439.1 287 76.3
EL10Ac8g20019 Beta vulgaris HOM05D005739 ORTHO05D007740 1.4e-120 436.8 291 76.3
Dinv13869 Davidia involucrata HOM05D005739 ORTHO05D007740 1.8e-120 436.4 288 75.7
Hma1.2p1_0813F.1_g222580 Hydrangea macrophylla HOM05D005739 ORTHO05D007740 5.2e-120 434.9 289 75.1
Ciclev10015698m.g Citrus clementina HOM05D005739 ORTHO05D007740 6.8e-120 434.5 288 74.0
Haze_06773 Corylus avellana HOM05D005739 ORTHO05D007740 2.8e-118 429.1 288 74.3
Migut.M01296 Erythranthe guttata HOM05D005739 ORTHO05D007740 1.1e-117 427.2 287 71.8
Rhsim02G0110500 Rhododendron simsii HOM05D005739 ORTHO05D007740 1.4e-117 426.8 290 73.1
Gohir.D06G153000 Gossypium hirsutum HOM05D005739 ORTHO05D007740 1.8e-117 426.4 292 71.9
QL05p074082 Quercus lobata HOM05D005739 ORTHO05D007740 1.8e-117 426.4 288 74.7
CiPaw.10G069300 Carya illinoinensis HOM05D005739 ORTHO05D007740 3.1e-117 425.6 289 73.0
Gorai.010G179000 Gossypium raimondii HOM05D005739 ORTHO05D007740 3.1e-117 425.6 292 71.9
Thecc.06G217300 Theobroma cacao HOM05D005739 ORTHO05D007740 3.1e-117 425.6 292 71.6
CSS0045804 Camellia sinensis var. sinensis HOM05D005739 ORTHO05D007740 7.0e-117 424.5 289 74.4
Cfa000251 Carpinus fangiana HOM05D005739 ORTHO05D007740 1.2e-116 423.7 288 73.3
Actinidia11847 Actinidia chinensis HOM05D005739 ORTHO05D007740 2.7e-116 422.5 289 74.4
Duzib235G0413 Durio zibethinus HOM05D005739 ORTHO05D007740 3.5e-116 422.2 292 71.2
COL.COLO4_31742 Corchorus olitorius HOM05D005739 ORTHO05D007740 7.7e-116 421.0 287 74.6
vmacro15817 Vaccinium macrocarpon HOM05D005739 ORTHO05D007740 7.7e-116 421.0 299 69.9
MSTRG.15974 Avicennia marina HOM05D005739 ORTHO05D007740 3.8e-115 418.7 287 72.1
Potri.011G000100 Populus trichocarpa HOM05D005739 ORTHO05D007740 5.5e-114 414.8 288 72.6
RcHm_v2.0_Chr5g0003721 Rosa chinensis HOM05D005739 ORTHO05D007740 1.2e-113 413.7 284 72.5
TAR627G1089 Trochodendron aralioides HOM05D005739 ORTHO05D007740 1.2e-113 413.7 289 70.9
Ah.14g088100 Amaranthus hybridus HOM05D005739 ORTHO05D007740 1.6e-113 413.3 331 65.9
Nn1g03584 Nelumbo nucifera HOM05D005739 ORTHO05D007740 1.6e-113 413.3 288 72.2
PGSC0003DMG400011257 Solanum tuberosum HOM05D005739 ORTHO05D007740 1.6e-113 413.3 290 71.4
GSVIVG01012654001 Vitis vinifera HOM05D005739 ORTHO05D007740 1.6e-113 413.3 288 72.2
TPR.G37091 Trifolium pratense HOM05D005739 ORTHO05D007740 2.1e-113 412.9 290 71.4
SalBow8G1417 Salvia bowleyana HOM05D005739 ORTHO05D007740 8.0e-113 411.0 291 70.1
Lsat_1_v5_gn_4_60101 Lactuca sativa HOM05D005739 ORTHO05D007740 1.0e-112 410.6 287 70.7
Sabra11G0000600 Salix brachista HOM05D005739 ORTHO05D007740 1.0e-112 410.6 288 72.6
Cc09_g01940 Coffea canephora HOM05D005739 ORTHO05D007740 1.8e-112 409.8 281 73.0
TWI38G1065 Tripterygium wilfordii HOM05D005739 ORTHO05D007740 1.8e-112 409.8 283 72.4
Psat4g007680 Pisum sativum HOM05D005739 ORTHO05D007740 3.0e-112 409.1 291 69.8
Solyc10g005310.3 Solanum lycopersicum HOM05D005739 ORTHO05D007740 3.0e-112 409.1 290 70.7
CANSAT56G1696 Cannabis sativa HOM05D005739 ORTHO05D007740 6.8e-112 407.9 287 72.1
DCAR_008137 Daucus carota HOM05D005739 ORTHO05D007740 8.8e-112 407.5 287 70.0
Ca_21095_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.2e-111 407.1 292 69.2
Ca_30203_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 1.2e-111 407.1 292 69.2
PGR004G1404 Punica granatum HOM05D005739 ORTHO05D007740 1.2e-111 407.1 284 72.2
SGA_v2.0_scaffold4G01929 Striga asiatica HOM05D005739 ORTHO05D007740 1.2e-111 407.1 284 71.5
Nitab4.5_0007448g0040 Nicotiana tabacum HOM05D005739 ORTHO05D007740 1.5e-111 406.8 290 70.7
Peaxi162Scf00203g01110 Petunia axillaris HOM05D005739 ORTHO05D007740 2.0e-111 406.4 288 70.8
Dinv17816 Davidia involucrata HOM05D005739 ORTHO05D007740 2.6e-111 406.0 275 74.5
arahy.Tifrunner.gnm1.ann1.GPHX1M Arachis hypogaea HOM05D005739 ORTHO05D007740 3.4e-111 405.6 290 71.0
arahy.Tifrunner.gnm1.ann1.HAY2RB Arachis hypogaea HOM05D005739 ORTHO05D007740 4.4e-111 405.2 290 71.0
AUR62012674 Chenopodium quinoa HOM05D005739 ORTHO05D007740 9.8e-111 404.1 269 76.6
Oeu063902.1 Olea europaea HOM05D005739 ORTHO05D007740 2.2e-110 402.9 281 71.2
FvH4_3g02490 Fragaria vesca HOM05D005739 ORTHO05D007740 2.8e-110 402.5 284 70.8
MD10G1317700 Malus domestica HOM05D005739 ORTHO05D007740 4.8e-110 401.7 285 71.2
VMungo1215G0361 Vigna mungo HOM05D005739 ORTHO05D007740 8.3e-110 401.0 290 69.7
MELO3C007380.2 Cucumis melo HOM05D005739 ORTHO05D007740 1.1e-109 400.6 288 68.8
AT4G04880 Arabidopsis thaliana HOM05D005739 ORTHO05D007740 1.4e-109 400.2 287 70.4
HanXRQChr16g0515931 Helianthus annuus HOM05D005739 ORTHO05D007740 1.4e-109 400.2 289 68.5
AL6G48370 Arabidopsis lyrata HOM05D005739 ORTHO05D007740 1.8e-109 399.8 287 70.4
CsaV3_6G049150 Cucumis sativus L. HOM05D005739 ORTHO05D007740 2.4e-109 399.4 288 67.7
CARHR252690 Cardamine hirsuta HOM05D005739 ORTHO05D007740 4.1e-109 398.7 287 70.4
FAN25G0806 Fragaria x ananassa HOM05D005739 ORTHO05D007740 5.4e-109 398.3 283 70.7
Carub.0006s3279 Capsella rubella HOM05D005739 ORTHO05D007740 7.0e-109 397.9 287 70.0
Phvul.003G077000 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 4.5e-108 395.2 289 68.5
ECA234G0122 Erigeron canadensis HOM05D005739 ORTHO05D007740 5.9e-108 394.8 289 67.5
Thhalv10028765m.g Eutrema salsugineum HOM05D005739 ORTHO05D007740 7.7e-108 394.4 287 69.0
A09p26050 Brassica napus HOM05D005739 ORTHO05D007740 2.9e-107 392.5 287 69.3
Glyma.07G258900 Glycine max HOM05D005739 ORTHO05D007740 2.9e-107 392.5 290 68.3
Sed0020639 Sechium edule HOM05D005739 ORTHO05D007740 2.9e-107 392.5 288 67.4
Lj6g0027190 Lotus japonicus HOM05D005739 ORTHO05D007740 3.8e-107 392.1 291 68.7
PSO832G4144 Papaver somniferum HOM05D005739 ORTHO05D007740 6.6e-107 391.3 288 67.0
BraA09t38171Z Brassica rapa HOM05D005739 ORTHO05D007740 1.5e-106 390.2 287 69.0
C09p33050 Brassica napus HOM05D005739 ORTHO05D007740 1.9e-106 389.8 288 68.4
BcaC04g21334 Brassica carinata HOM05D005739 ORTHO05D007740 2.5e-106 389.4 287 68.6
Lj1C1227G9 Lonicera japonica HOM05D005739 ORTHO05D007740 2.5e-106 389.4 275 72.0
BolC9t56140H Brassica oleracea HOM05D005739 ORTHO05D007740 3.3e-106 389.0 287 68.6
Eucgr.D01304 Eucalyptus grandis HOM05D005739 ORTHO05D007740 3.3e-106 389.0 288 67.0
PSO210G3635 Papaver somniferum HOM05D005739 ORTHO05D007740 4.2e-106 388.7 288 67.0
Sp6g04100 Schrenkiella parvula HOM05D005739 ORTHO05D007740 7.2e-106 387.9 287 68.3
Lalb_Chr20g0118561 Lupinus albus HOM05D005739 ORTHO05D007740 9.5e-106 387.5 291 69.4
AUR62021982 Chenopodium quinoa HOM05D005739 ORTHO05D007740 2.8e-105 386.0 303 68.0
VMungo0540G2038 Vigna mungo HOM05D005739 ORTHO05D007740 3.6e-105 385.6 293 66.9
Aa31LG9G9620 Aethionema arabicum HOM05D005739 ORTHO05D007740 6.1e-105 384.8 287 67.2
Glyma.13G206500 Glycine max HOM05D005739 ORTHO05D007740 1.0e-104 384.0 288 66.0
Zm00001eb110820 Zea mays HOM05D005739 ORTHO05D007740 1.4e-104 383.6 285 65.6
Prupe.4G024100 Prunus persica HOM05D005739 ORTHO05D007740 1.8e-104 383.3 277 69.3
CDE11G0579 Ceratophyllum demersum HOM05D005739 ORTHO05D007740 3.0e-104 382.5 288 65.6
Glyma.15G106200 Glycine max HOM05D005739 ORTHO05D007740 4.0e-104 382.1 293 65.2
Sed0022137 Sechium edule HOM05D005739 ORTHO05D007740 8.9e-104 380.9 290 64.8
ATR0752G010 Amborella trichopoda HOM05D005739 ORTHO05D007740 1.5e-103 380.2 288 65.6
Phvul.006G151100 Phaseolus vulgaris HOM05D005739 ORTHO05D007740 7.5e-103 377.9 293 64.8
Medtr2g022780 Medicago truncatula HOM05D005739 ORTHO05D007740 1.7e-102 376.7 290 66.2
Dinv20033 Davidia involucrata HOM05D005739 ORTHO05D007740 3.7e-102 375.6 304 65.1
Psat1g181440 Pisum sativum HOM05D005739 ORTHO05D007740 3.7e-102 375.6 288 66.0
Gohir.A06G147200 Gossypium hirsutum HOM05D005739 ORTHO05D007740 1.4e-101 373.6 265 70.6
BcaB01g01842 Brassica carinata HOM05D005739 ORTHO05D007740 1.8e-101 373.2 287 66.6
ClCG01G022090 Citrullus lanatus HOM05D005739 ORTHO05D007740 3.2e-101 372.5 287 65.2
THA.LOC104812968 Tarenaya hassleriana HOM05D005739 ORTHO05D007740 3.2e-101 372.5 262 71.8
Os07g0661000 Oryza sativa ssp. japonica HOM05D005739 ORTHO05D007740 9.2e-101 370.9 285 63.9
HPP92_016316 Vanilla planifolia HOM05D005739 ORTHO05D007740 1.6e-100 370.2 290 63.4
Cpa.g.sc198.24 Carica papaya HOM05D005739 ORTHO05D007740 2.7e-100 369.4 264 72.3
Ca_00625_v3 Cicer arietinum L. HOM05D005739 ORTHO05D007740 4.5e-100 368.6 292 65.1
Nitab4.5_0002155g0060 Nicotiana tabacum HOM05D005739 ORTHO05D007740 3.9e-99 365.5 274 68.6
TPR.G7643 Trifolium pratense HOM05D005739 ORTHO05D007740 5.0e-99 365.2 287 64.5
Medtr4g131840 Medicago truncatula HOM05D005739 ORTHO05D007740 3.1e-96 355.9 266 68.0
Manes.16G010200 Manihot esculenta HOM05D005739 ORTHO05D007740 1.5e-95 353.6 238 74.8
SEGI_12484 Sequoiadendron giganteum HOM05D005739 ORTHO05D007740 1.5e-95 353.6 285 61.4
Aqoxy1G03635 Aquilegia oxysepala HOM05D005739 ORTHO05D007740 6.0e-92 341.7 268 64.6
MBI18_g35070_MAGBIO Magnolia biondii HOM05D005739 ORTHO05D007740 3.3e-90 335.9 243 69.5
Hund23487 Selenicereus undatus HOM05D005739 ORTHO05D007740 1.4e-88 330.5 282 63.5
SMO343G0036 Selaginella moellendorffii HOM05D005739 ORTHO05D007740 1.9e-85 320.1 290 57.6
Mapoly0023s0135 Marchantia polymorpha HOM05D005739 ORTHO05D007740 9.5e-82 307.8 295 54.6
unitig_92.g28118 Utricularia gibba HOM05D005739 ORTHO05D007740 1.6e-81 307.0 237 66.7
HPP92_016297 Vanilla planifolia HOM05D005739 ORTHO05D007740 3.6e-81 305.8 290 56.2
AagrBONN_evm.TU.Sc2ySwM_368.535 Anthoceros agrestis HOM05D005739 ORTHO05D007740 3.2e-69 266.2 287 49.1
Pp3c11_7970 Physcomitrium patens HOM05D005739 ORTHO05D007740 4.8e-65 252.3 240 53.3
CAN.G105.13 Capsicum annuum HOM05D005739 ORTHO05D007740 1.1e-64 251.1 191 64.4
Sopen10g001300 Solanum pennellii HOM05D005739 ORTHO05D007740 1.5e-63 247.3 184 67.4
arahy.Tifrunner.gnm1.ann1.H0U1UD Arachis hypogaea HOM05D005739 ORTHO05D007740 3.4e-55 219.5 266 49.6
Cre03.g161000 Chlamydomonas reinhardtii HOM05D005739 ORTHO05D007740 1.1e-53 214.5 389 36.0
arahy.Tifrunner.gnm1.ann1.53BRPK Arachis hypogaea HOM05D005739 ORTHO05D007740 7.9e-52 208.4 176 65.3
arahy.Tifrunner.gnm1.ann1.Q9UH73 Arachis hypogaea HOM05D005739 ORTHO05D007740 5.6e-50 202.2 270 43.7
arahy.Tifrunner.gnm1.ann1.FSQL8E Arachis hypogaea HOM05D005739 ORTHO05D007740 1.2e-47 194.5 272 46.0
MCO11G903 Micromonas commoda HOM05D005739 ORTHO05D007740 3.4e-47 193.0 281 42.3
arahy.Tifrunner.gnm1.ann1.KZ0328 Arachis hypogaea HOM05D005739 ORTHO05D007740 6.7e-43 178.7 241 47.7
arahy.Tifrunner.gnm1.ann1.7V36PE Arachis hypogaea HOM05D005739 ORTHO05D007740 3.3e-42 176.4 211 50.2
arahy.Tifrunner.gnm1.ann1.0E5R4V Arachis hypogaea HOM05D005739 ORTHO05D007740 3.7e-41 172.9 181 56.9
arahy.Tifrunner.gnm1.ann1.B9PES8 Arachis hypogaea HOM05D005739 ORTHO05D007740 3.1e-40 169.9 181 55.8
arahy.Tifrunner.gnm1.ann1.AD56MI Arachis hypogaea HOM05D005739 ORTHO05D083983 1.2e-36 157.9 245 44.5
arahy.Tifrunner.gnm1.ann1.39644B Arachis hypogaea HOM05D005739 ORTHO05D007740 3.9e-19 99.8 204 35.8
arahy.Tifrunner.gnm1.ann1.3ZZ8UM Arachis hypogaea HOM05D000187 ORTHO05D000230 3.6e-12 76.6 49 69.4
CANSAT64G1767 Cannabis sativa HOM05D005739 ORTHO05D033954 2.4e-08 63.9 38 73.7
Nn1g07096 Nelumbo nucifera HOM05D005739 ORTHO05D007740 7.0e-08 62.4 83 41.0
arahy.Tifrunner.gnm1.ann1.ZUJ3H1 Arachis hypogaea HOM05D005739 ORTHO05D083715 5.9e-07 59.3 35 71.4
Ca_29425_v3 Cicer arietinum L. HOM05D005739 ORTHO05D044167 5.0e-06 56.2 136 29.4


User provided reference genes

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