Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc06g0009320 Simmondsia chinensis HOM05D004838 ORTHO05D005373 2.0e-32 141.7 67 100.0
Lsat_1_v5_gn_3_40321 Lactuca sativa HOM05D004838 ORTHO05D005373 3.4e-08 61.2 77 42.9
MD17G1084900 Malus domestica HOM05D004838 ORTHO05D005373 3.4e-08 61.2 86 40.7
Lsat_1_v5_gn_4_68580 Lactuca sativa HOM05D004838 ORTHO05D005373 4.5e-08 60.8 84 42.9
ECA246G4438 Erigeron canadensis HOM05D004838 ORTHO05D005373 1.0e-07 59.7 82 42.7
Sc21g0002510 Simmondsia chinensis HOM05D004838 ORTHO05D005373 1.7e-07 58.9 77 48.1
Cfa014541 Carpinus fangiana HOM05D004838 ORTHO05D005373 2.2e-07 58.5 85 43.5
Sc21g0002490 Simmondsia chinensis HOM05D004838 ORTHO05D005373 2.2e-07 58.5 84 44.0
Sc21g0002500 Simmondsia chinensis HOM05D004838 ORTHO05D005373 2.2e-07 58.5 77 50.6
Lsat_1_v5_gn_3_40341 Lactuca sativa HOM05D004838 ORTHO05D005373 2.9e-07 58.2 77 41.6
Sc21g0002480 Simmondsia chinensis HOM05D004838 ORTHO05D005373 2.9e-07 58.2 84 47.6
Lsat_1_v5_gn_3_40080 Lactuca sativa HOM05D004838 ORTHO05D005373 3.8e-07 57.8 85 41.2
Sc21g0002530 Simmondsia chinensis HOM05D004838 ORTHO05D005373 3.8e-07 57.8 84 47.6
Lsat_1_v5_gn_3_40041 Lactuca sativa HOM05D004838 ORTHO05D005373 4.9e-07 57.4 82 43.9
Haze_13080 Corylus avellana HOM05D004838 ORTHO05D005373 6.5e-07 57.0 85 42.4
Haze_13083 Corylus avellana HOM05D004838 ORTHO05D005373 6.5e-07 57.0 85 42.4
Prupe.3G230300 Prunus persica HOM05D004838 ORTHO05D005373 6.5e-07 57.0 82 41.5
Eucgr.K00912 Eucalyptus grandis HOM05D004838 ORTHO05D005373 8.4e-07 56.6 87 43.7
Lsat_1_v5_gn_3_40461 Lactuca sativa HOM05D004838 ORTHO05D005373 8.4e-07 56.6 77 41.6
MBI02_g13229_MAGBIO Magnolia biondii HOM05D004838 ORTHO05D005373 8.4e-07 56.6 82 40.2
MD09G1096600 Malus domestica HOM05D004838 ORTHO05D005373 8.4e-07 56.6 86 38.4
Rhsim04G0062900 Rhododendron simsii HOM05D000831 ORTHO05D005373 8.4e-07 56.6 83 43.4
CiPaw.04G122600 Carya illinoinensis HOM05D004838 ORTHO05D005373 1.4e-06 55.8 83 41.0
Nn2g11248 Nelumbo nucifera HOM05D004838 ORTHO05D005373 1.9e-06 55.5 73 43.8
CiPaw.03G169600 Carya illinoinensis HOM05D004838 ORTHO05D005373 4.2e-06 54.3 87 42.5
Hma1.2p1_0662F.1_g198280 Hydrangea macrophylla HOM05D004838 ORTHO05D005373 4.2e-06 54.3 88 43.2
SalBow7G0296 Salvia bowleyana HOM05D004838 ORTHO05D005373 4.2e-06 54.3 87 40.2
Nitab4.5_0005244g0070 Nicotiana tabacum HOM05D004838 ORTHO05D005373 9.3e-06 53.1 70 38.6


User provided reference genes

Program Settings