Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc06g0009150 Simmondsia chinensis HOM05D006426 ORTHO05D007737 7.1e-268 926.8 497 100.0
AUR62037610 Chenopodium quinoa HOM05D006426 ORTHO05D008399 3.6e-110 402.9 530 53.0
EL10Ac9g20938 Beta vulgaris HOM05D006426 ORTHO05D007737 3.1e-106 389.8 531 52.2
Ah.01g003530 Amaranthus hybridus HOM05D006426 ORTHO05D007737 5.2e-101 372.5 530 50.9
Haze_13087 Corylus avellana HOM05D006426 ORTHO05D007737 1.2e-81 308.1 478 47.7
Dinv15495 Davidia involucrata HOM05D006426 ORTHO05D007737 2.7e-81 307.0 486 46.7
Cfa014544 Carpinus fangiana HOM05D006426 ORTHO05D007737 3.2e-79 300.1 472 46.0
Hma1.2p1_0565F.1_g179550 Hydrangea macrophylla HOM05D006426 ORTHO05D007737 5.5e-79 299.3 463 48.2
QL08p037311 Quercus lobata HOM05D006426 ORTHO05D007737 1.4e-77 294.7 483 43.9
Gohir.D02G183100 Gossypium hirsutum HOM05D006426 ORTHO05D007737 2.3e-77 293.9 474 44.9
Gohir.A03G160000 Gossypium hirsutum HOM05D006426 ORTHO05D007737 1.2e-76 291.6 473 44.6
Gorai.005G205500 Gossypium raimondii HOM05D006426 ORTHO05D007737 1.5e-76 291.2 474 44.5
Sabra19G0117200 Salix brachista HOM05D006426 ORTHO05D007737 1.7e-75 287.7 472 45.1
Prupe.3G231100 Prunus persica HOM05D006426 ORTHO05D007737 2.8e-75 287.0 484 46.1
Ciclev10015289m.g Citrus clementina HOM05D006426 ORTHO05D007737 4.9e-75 286.2 462 47.0
Actinidia12458 Actinidia chinensis HOM05D006426 ORTHO05D007737 6.3e-75 285.8 470 45.3
Potri.013G147500 Populus trichocarpa HOM05D006426 ORTHO05D007737 6.3e-75 285.8 475 44.6
Thecc.02G171600 Theobroma cacao HOM05D006426 ORTHO05D007737 6.3e-75 285.8 478 43.5
Potri.019G116200 Populus trichocarpa HOM05D006426 ORTHO05D007737 8.3e-75 285.4 466 45.5
MD09G1096400 Malus domestica HOM05D006426 ORTHO05D007737 1.4e-74 284.6 480 45.4
Sabra19G0136500 Salix brachista HOM05D006426 ORTHO05D007737 2.4e-74 283.9 472 45.6
COL.COLO4_13683 Corchorus olitorius HOM05D006426 ORTHO05D007737 7.0e-74 282.3 485 43.3
CiPaw.04G122700 Carya illinoinensis HOM05D006426 ORTHO05D007737 3.5e-73 280.0 468 42.5
Cc05_g06260 Coffea canephora HOM05D006426 ORTHO05D007737 1.0e-72 278.5 491 44.0
Sabra13G0119100 Salix brachista HOM05D006426 ORTHO05D007737 1.3e-72 278.1 473 44.2
Manes.13G151600 Manihot esculenta HOM05D006426 ORTHO05D007737 1.7e-72 277.7 469 46.7
MD17G1084500 Malus domestica HOM05D006426 ORTHO05D007737 2.9e-72 276.9 481 44.7
Rhsim06G0152100 Rhododendron simsii HOM05D006426 ORTHO05D007737 1.1e-71 275.0 481 42.6
Manes.12G083000 Manihot esculenta HOM05D006426 ORTHO05D007737 7.3e-71 272.3 474 45.4
Nitab4.5_0001871g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 7.3e-71 272.3 480 45.6
TAR627G1051 Trochodendron aralioides HOM05D006426 ORTHO05D007737 7.3e-71 272.3 469 42.2
FAN02G4384 Fragaria x ananassa HOM05D006426 ORTHO05D007737 1.2e-70 271.6 474 44.3
FvH4_6g44570 Fragaria vesca HOM05D006426 ORTHO05D007737 2.1e-70 270.8 470 43.8
RcHm_v2.0_Chr2g0161781 Rosa chinensis HOM05D006426 ORTHO05D007737 2.8e-70 270.4 476 44.3
Duzib248G1395 Durio zibethinus HOM05D006426 ORTHO05D007737 3.6e-70 270.0 471 42.0
TWI75G1119 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 1.0e-69 268.5 489 41.5
FAN14G1414 Fragaria x ananassa HOM05D006426 ORTHO05D007737 2.3e-69 267.3 471 43.7
TWI18G0136 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 2.3e-69 267.3 476 41.8
FAN09G0359 Fragaria x ananassa HOM05D006426 ORTHO05D007737 6.8e-69 265.8 474 43.5
Duzib132G0414 Durio zibethinus HOM05D006426 ORTHO05D007737 5.7e-68 262.7 473 42.9
PGSC0003DMG400018371 Solanum tuberosum HOM05D006426 ORTHO05D007737 7.5e-68 262.3 482 43.4
Nn1g03877 Nelumbo nucifera HOM05D006426 ORTHO05D007737 1.7e-67 261.2 477 41.3
MSTRG.14180 Avicennia marina HOM05D006426 ORTHO05D007737 2.2e-67 260.8 485 43.1
Actinidia09902 Actinidia chinensis HOM05D006426 ORTHO05D007737 6.4e-67 259.2 460 43.9
Solyc07g054690.1 Solanum lycopersicum HOM05D006426 ORTHO05D007737 6.4e-67 259.2 484 43.2
Sopen07g028590 Solanum pennellii HOM05D006426 ORTHO05D007737 1.4e-66 258.1 484 43.4
Oeu025481.1 Olea europaea HOM05D006426 ORTHO05D007737 1.2e-65 255.0 511 40.7
Nitab4.5_0002370g0070 Nicotiana tabacum HOM05D006426 ORTHO05D007737 1.6e-65 254.6 477 43.8
Peaxi162Scf00007g00272 Petunia axillaris HOM05D006426 ORTHO05D007737 1.7e-64 251.1 475 42.7
TWI36G1326 Tripterygium wilfordii HOM05D006426 ORTHO05D007737 2.3e-64 250.8 491 39.3
Cpa.g.sc34.90 Carica papaya HOM05D006426 ORTHO05D007737 3.0e-64 250.4 484 40.9
CAN.G508.22 Capsicum annuum HOM05D006426 ORTHO05D007737 1.5e-63 248.1 468 42.5
PGR042G3565 Punica granatum HOM05D006426 ORTHO05D007737 5.6e-63 246.1 473 42.5
Migut.H01020 Erythranthe guttata HOM05D006426 ORTHO05D007737 4.0e-61 240.0 487 42.9
DCAR_009725 Daucus carota HOM05D006426 ORTHO05D007737 5.2e-61 239.6 459 42.3
Oeu018075.1 Olea europaea HOM05D006426 ORTHO05D007737 1.5e-60 238.0 481 38.7
ClCG02G017320 Citrullus lanatus HOM05D006426 ORTHO05D007737 1.9e-55 221.1 480 39.2
THA.LOC104804065 Tarenaya hassleriana HOM05D006426 ORTHO05D007737 2.5e-55 220.7 448 39.5
Thhalv10025277m.g Eutrema salsugineum HOM05D006426 ORTHO05D007737 4.3e-55 219.9 465 37.8
Lj8P117T60 Lonicera japonica HOM05D006426 ORTHO05D007737 1.6e-54 218.0 349 41.3
TAR629G2656 Trochodendron aralioides HOM05D006426 ORTHO05D007737 1.8e-53 214.5 435 39.1
Eucgr.A01776 Eucalyptus grandis HOM05D006426 ORTHO05D007737 2.3e-53 214.2 414 40.6
SalBow1G4632 Salvia bowleyana HOM05D006426 ORTHO05D007737 4.4e-52 209.9 454 40.3
AT4G28230 Arabidopsis thaliana HOM05D006426 ORTHO05D007737 1.7e-51 208.0 455 37.1
AL7G24370 Arabidopsis lyrata HOM05D006426 ORTHO05D007737 2.9e-51 207.2 455 38.0
Carub.0007s1253 Capsella rubella HOM05D006426 ORTHO05D007737 4.9e-51 206.5 450 38.0
CARHR235940 Cardamine hirsuta HOM05D006426 ORTHO05D007737 4.9e-51 206.5 465 38.1
MELO3C013535.2 Cucumis melo HOM05D006426 ORTHO05D007737 8.3e-51 205.7 470 37.7
CsaV3_6G012420 Cucumis sativus L. HOM05D006426 ORTHO05D007737 1.1e-50 205.3 471 37.4
TAR626G1919 Trochodendron aralioides HOM05D006426 ORTHO05D007737 1.1e-50 205.3 467 38.1
Sed0007067 Sechium edule HOM05D006426 ORTHO05D007737 2.4e-50 204.1 469 37.3
Sp7g26190 Schrenkiella parvula HOM05D006426 ORTHO05D007737 1.3e-48 198.4 462 38.7
Aqoxy1G03895 Aquilegia oxysepala HOM05D006426 ORTHO05D007737 2.3e-48 197.6 507 36.9
A01p19640 Brassica napus HOM05D006426 ORTHO05D007737 6.6e-48 196.1 453 37.7
SGA_v2.0_scaffold49G18304 Striga asiatica HOM05D006426 ORTHO05D007737 3.3e-47 193.7 475 38.5
BcaNung01587 Brassica carinata HOM05D006426 ORTHO05D007737 6.2e-46 189.5 452 37.6
BraA01t01897Z Brassica rapa HOM05D006426 ORTHO05D007737 8.1e-46 189.1 451 37.3
Atru.chr6.3076 Acer truncatum HOM05D006426 ORTHO05D007737 1.4e-45 188.3 323 44.9
PSO832G1174 Papaver somniferum HOM05D006426 ORTHO05D007737 2.3e-45 187.6 468 36.5
Aa31LG2G22090 Aethionema arabicum HOM05D006426 ORTHO05D007737 4.0e-45 186.8 450 35.3
arahy.Tifrunner.gnm1.ann1.512YGT Arachis hypogaea HOM05D006426 ORTHO05D007737 3.4e-44 183.7 492 35.4
arahy.Tifrunner.gnm1.ann1.2866YZ Arachis hypogaea HOM05D006426 ORTHO05D007737 9.9e-44 182.2 499 36.3
PSO210G4394 Papaver somniferum HOM05D006426 ORTHO05D007737 2.9e-43 180.6 468 35.0
DCAR_012977 Daucus carota HOM05D006426 ORTHO05D007737 8.6e-40 169.1 460 33.3
Lsat_1_v5_gn_4_69460 Lactuca sativa HOM05D006426 ORTHO05D007737 1.1e-39 168.7 479 32.6
BolC1t02416H Brassica oleracea HOM05D006426 ORTHO05D007737 4.3e-39 166.8 447 34.5
C01p24670 Brassica napus HOM05D006426 ORTHO05D007737 5.6e-39 166.4 447 34.5
BcaC09g50504 Brassica carinata HOM05D006426 ORTHO05D007737 7.3e-39 166.0 448 34.6
MBI18_g45419_MAGBIO Magnolia biondii HOM05D006426 ORTHO05D007737 3.4e-36 157.1 469 35.2
Lj3g0000273 Lotus japonicus HOM05D006426 ORTHO05D007737 5.8e-36 156.4 479 32.8
PSO541G1576 Papaver somniferum HOM05D006426 ORTHO05D007737 1.7e-35 154.8 491 35.2
PSO675G8522 Papaver somniferum HOM05D006426 ORTHO05D007737 1.1e-34 152.1 486 35.6
HanXRQChr15g0488091 Helianthus annuus HOM05D006426 ORTHO05D007737 7.1e-34 149.4 459 32.2
unitig_52.g17339 Utricularia gibba HOM05D006426 ORTHO05D007737 7.1e-34 149.4 462 34.6
Lalb_Chr01g0017281 Lupinus albus HOM05D006426 ORTHO05D007737 9.6e-31 139.0 434 32.3
ECA232G2383 Erigeron canadensis HOM05D006426 ORTHO05D007737 2.0e-28 131.3 487 31.2
Phvul.005G017100 Phaseolus vulgaris HOM05D006426 ORTHO05D007737 2.7e-25 120.9 452 29.9
VMungo1080G0900 Vigna mungo HOM05D006426 ORTHO05D007737 4.6e-25 120.2 456 29.4
Lj1P736T39 Lonicera japonica HOM05D006426 ORTHO05D007737 7.9e-25 119.4 162 44.4
Glyma.11G158800 Glycine max HOM05D006426 ORTHO05D007737 1.3e-24 118.6 454 30.8
Glyma.04G132700 Glycine max HOM05D006426 ORTHO05D007737 2.3e-24 117.9 451 29.9
SGA_v2.0_scaffold159G37625 Striga asiatica HOM05D006426 ORTHO05D007737 2.5e-23 114.4 348 32.5
Sed0009175 Sechium edule HOM05D006426 ORTHO05D007737 7.4e-23 112.8 373 30.8
FvH4_6g44594 Fragaria vesca HOM05D006426 ORTHO05D007737 9.0e-21 105.9 172 42.4
ATR0693G210 Amborella trichopoda HOM05D006426 ORTHO05D007737 2.6e-20 104.4 506 28.5
Psat5g223040 Pisum sativum HOM05D006426 ORTHO05D007737 6.4e-19 99.8 486 29.8
CDE10G0475 Ceratophyllum demersum HOM05D006426 ORTHO05D007737 7.9e-17 92.8 500 27.4
Medtr3g013540 Medicago truncatula HOM05D006426 ORTHO05D007737 1.1e-15 89.0 405 29.4
unitig_62.g23190 Utricularia gibba HOM05D006426 ORTHO05D007737 1.2e-12 79.0 159 39.6
TPR.G1458 Trifolium pratense HOM05D006426 ORTHO05D007737 2.6e-12 77.8 456 28.5
Ca_18074_v3 Cicer arietinum L. HOM05D006426 ORTHO05D007737 7.6e-12 76.3 449 29.2
HPP92_011117 Vanilla planifolia HOM05D006426 ORTHO05D007737 1.0e-11 75.9 403 26.6
Oeu029930.1 Olea europaea HOM05D006426 ORTHO05D007737 7.1e-10 69.7 141 39.7
GSVIVG01030006001 Vitis vinifera HOM05D006426 ORTHO05D007737 9.3e-10 69.3 146 38.4
Oeu003230.1 Olea europaea HOM05D006426 ORTHO05D007737 4.6e-09 67.0 141 38.3
HPP92_011122 Vanilla planifolia HOM05D006426 ORTHO05D007737 1.3e-08 65.5 411 25.5
Oeu035359.1 Olea europaea HOM05D006426 ORTHO05D007737 5.1e-08 63.5 141 36.9
Os06g0683900 Oryza sativa ssp. japonica HOM05D032587 ORTHO05D037111 1.9e-07 61.6 181 30.4
Atru.chr6.3075 Acer truncatum HOM05D006426 ORTHO05D007737 7.4e-07 59.7 68 45.6


User provided reference genes

Program Settings