Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc06g0009110 Simmondsia chinensis HOM05D004563 ORTHO05D002944 2.7e-269 931.4 464 100.0
Sc21g0003700 Simmondsia chinensis HOM05D004563 ORTHO05D002944 1.2e-11 75.5 515 25.8
Lsat_1_v5_gn_8_140081 Lactuca sativa HOM05D004563 ORTHO05D002944 3.7e-08 63.9 64 45.3
PSO541G0319 Papaver somniferum HOM05D004563 ORTHO05D002944 3.7e-08 63.9 70 47.1
FAN02G0553 Fragaria x ananassa HOM05D004563 ORTHO05D002944 4.8e-08 63.5 61 47.5
FAN05G5668 Fragaria x ananassa HOM05D004563 ORTHO05D002944 4.8e-08 63.5 61 47.5
FAN09G1171 Fragaria x ananassa HOM05D004563 ORTHO05D002944 4.8e-08 63.5 61 47.5
FAN09G4605 Fragaria x ananassa HOM05D004563 ORTHO05D002944 4.8e-08 63.5 61 47.5
Dinv03911 Davidia involucrata HOM05D004563 ORTHO05D002944 1.8e-07 61.6 91 39.6
COL.COLO4_31315 Corchorus olitorius HOM05D005057 ORTHO05D006570 2.4e-07 61.2 78 39.7
Peaxi162Scf00469g00139 Petunia axillaris HOM05D004563 ORTHO05D002944 2.4e-07 61.2 51 54.9
TAR624G1329 Trochodendron aralioides HOM05D004563 ORTHO05D002944 2.4e-07 61.2 210 27.6
FvH4_6g27121 Fragaria vesca HOM05D004563 ORTHO05D002944 3.1e-07 60.8 114 36.0
FAN14G3451 Fragaria x ananassa HOM05D004563 ORTHO05D002944 3.1e-07 60.8 114 36.0
PSO675G1487 Papaver somniferum HOM05D004563 ORTHO05D002944 3.1e-07 60.8 70 45.7
Rhsim06G0133100 Rhododendron simsii HOM05D004563 ORTHO05D002944 3.1e-07 60.8 124 36.3
AUR62038995 Chenopodium quinoa HOM05D007922 ORTHO05D009490 4.0e-07 60.5 67 49.3
Eucgr.A01904 Eucalyptus grandis HOM05D004563 ORTHO05D002944 4.0e-07 60.5 61 49.2
CARHR124710 Cardamine hirsuta HOM05D004563 ORTHO05D002944 5.3e-07 60.1 71 42.3
Duzib147G1211 Durio zibethinus HOM05D004563 ORTHO05D002944 5.3e-07 60.1 65 47.7
Atru.chr6.2814 Acer truncatum HOM05D004563 ORTHO05D002944 6.9e-07 59.7 128 34.4
Dinv14971 Davidia involucrata HOM05D000845 ORTHO05D003813 6.9e-07 59.7 62 46.8
Lalb_Chr14g0367401 Lupinus albus HOM05D004563 ORTHO05D002944 6.9e-07 59.7 113 37.2
TAR626G0367 Trochodendron aralioides HOM05D004563 ORTHO05D002944 6.9e-07 59.7 65 44.6
Lalb_Chr19g0134931 Lupinus albus HOM05D004563 ORTHO05D002944 9.0e-07 59.3 61 45.9
TWI59G1400 Tripterygium wilfordii HOM05D004563 ORTHO05D002944 9.0e-07 59.3 60 50.0
Carub.0004s1239 Capsella rubella HOM05D004563 ORTHO05D002944 1.2e-06 58.9 65 44.6
Gohir.A10G031400 Gossypium hirsutum HOM05D004563 ORTHO05D002944 1.2e-06 58.9 231 27.3
CSS0038794 Camellia sinensis var. sinensis HOM05D008023 ORTHO05D002944 2.0e-06 58.2 59 45.8
Thhalv10016698m.g Eutrema salsugineum HOM05D004563 ORTHO05D002944 2.0e-06 58.2 58 48.3
MBI07_g21399_MAGBIO Magnolia biondii HOM05D004563 ORTHO05D002944 2.0e-06 58.2 70 37.1
Nitab4.5_0003827g0050 Nicotiana tabacum HOM05D004563 ORTHO05D002944 2.0e-06 58.2 51 52.9
Solyc07g053320.4 Solanum lycopersicum HOM05D004563 ORTHO05D002944 2.0e-06 58.2 141 36.2
GSVIVG01020684001 Vitis vinifera HOM05D004563 ORTHO05D002944 2.0e-06 58.2 73 41.1
CSS0022203 Camellia sinensis var. sinensis HOM05D008023 ORTHO05D002944 2.6e-06 57.8 59 45.8
CSS0035750 Camellia sinensis var. sinensis HOM05D008023 ORTHO05D002944 2.6e-06 57.8 59 45.8
CSS0041377 Camellia sinensis var. sinensis HOM05D008023 ORTHO05D002944 2.6e-06 57.8 59 45.8
Gohir.A10G153900 Gossypium hirsutum HOM05D004563 ORTHO05D002944 2.6e-06 57.8 68 48.5
Gohir.D10G112200 Gossypium hirsutum HOM05D004563 ORTHO05D002944 2.6e-06 57.8 68 48.5
Gorai.011G124100 Gossypium raimondii HOM05D004563 ORTHO05D002944 2.6e-06 57.8 68 48.5
QL08p041398 Quercus lobata HOM05D004563 ORTHO05D002944 2.6e-06 57.8 64 43.8
Aqoxy1G03185 Aquilegia oxysepala HOM05D004563 ORTHO05D002944 3.4e-06 57.4 97 35.1
AL4G26310 Arabidopsis lyrata HOM05D004563 ORTHO05D002944 3.4e-06 57.4 61 44.3
Dinv15459 Davidia involucrata HOM05D004563 ORTHO05D002944 3.4e-06 57.4 94 36.2
Dinv40663 Davidia involucrata HOM05D014353 ORTHO05D002944 3.4e-06 57.4 61 45.9
HanXRQChr17g0557991 Helianthus annuus HOM05D004563 ORTHO05D002944 3.4e-06 57.4 260 25.0
Medtr4g079720 Medicago truncatula HOM05D004563 ORTHO05D002944 3.4e-06 57.4 61 45.9
PGSC0003DMG400012394 Solanum tuberosum HOM05D018586 ORTHO05D002944 3.4e-06 57.4 62 46.8
VMungo1127G1865 Vigna mungo HOM05D004563 ORTHO05D002944 3.4e-06 57.4 62 48.4
ClCG02G017950 Citrullus lanatus HOM05D004563 ORTHO05D002944 4.5e-06 57.0 58 44.8
Nn1g09097 Nelumbo nucifera HOM05D004563 ORTHO05D002944 4.5e-06 57.0 102 35.3
AT2G31130 Arabidopsis thaliana HOM05D004563 ORTHO05D002944 5.8e-06 56.6 61 44.3
CiPaw.04G131700 Carya illinoinensis HOM05D004563 ORTHO05D002944 5.8e-06 56.6 135 33.3
Gorai.010G159000 Gossypium raimondii HOM05D004563 ORTHO05D002944 5.8e-06 56.6 64 40.6
EL10Ac9g20912 Beta vulgaris HOM05D004563 ORTHO05D002944 7.6e-06 56.2 470 23.2
Dinv04617 Davidia involucrata HOM05D000845 ORTHO05D003813 7.6e-06 56.2 65 41.5
Manes.13G138000 Manihot esculenta HOM05D004563 ORTHO05D002944 7.6e-06 56.2 111 36.9
RcHm_v2.0_Chr2g0128481 Rosa chinensis HOM05D004563 ORTHO05D002944 7.6e-06 56.2 108 33.3
RcHm_v2.0_Chr2g0129081 Rosa chinensis HOM05D004563 ORTHO05D002944 7.6e-06 56.2 108 33.3
Sp4g13600 Schrenkiella parvula HOM05D004563 ORTHO05D002944 7.6e-06 56.2 55 45.5
PGSC0003DMG400020429 Solanum tuberosum HOM05D004563 ORTHO05D002944 7.6e-06 56.2 141 35.5
arahy.Tifrunner.gnm1.ann1.B2LHN7 Arachis hypogaea HOM05D004563 ORTHO05D002944 1.0e-05 55.8 104 34.6


User provided reference genes

Program Settings