Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc06g0008260 Simmondsia chinensis HOM05D004273 ORTHO05D005041 9.7e-217 756.5 379 100.0
Hund04983 Selenicereus undatus HOM05D004273 ORTHO05D005041 2.4e-119 433.0 345 63.8
EL10Ac7g15984 Beta vulgaris HOM05D004273 ORTHO05D005041 2.7e-118 429.5 342 62.3
QL01p032775 Quercus lobata HOM05D004273 ORTHO05D005041 3.7e-115 419.1 332 63.0
Cfa011474 Carpinus fangiana HOM05D004273 ORTHO05D005041 1.1e-111 407.5 346 59.8
Dinv32873 Davidia involucrata HOM05D004273 ORTHO05D005041 3.2e-111 406.0 342 59.6
Hma1.2p1_0624F.1_g191440 Hydrangea macrophylla HOM05D004273 ORTHO05D005041 5.5e-111 405.2 345 59.1
Potri.009G028700 Populus trichocarpa HOM05D004273 ORTHO05D005041 7.1e-111 404.8 333 61.0
PGR102G1220 Punica granatum HOM05D004273 ORTHO05D005041 9.3e-111 404.4 341 59.2
AUR62001817 Chenopodium quinoa HOM05D004273 ORTHO05D005041 1.6e-110 403.7 340 60.0
TAR633G2082 Trochodendron aralioides HOM05D004273 ORTHO05D005041 3.5e-110 402.5 333 60.4
Duzib170G0539 Durio zibethinus HOM05D004273 ORTHO05D005041 4.6e-110 402.1 332 59.6
AUR62009603 Chenopodium quinoa HOM05D004273 ORTHO05D005041 6.0e-110 401.7 378 55.3
Sabra16G0143100 Salix brachista HOM05D004273 ORTHO05D005041 1.3e-109 400.6 332 60.8
CiPaw.13G097100 Carya illinoinensis HOM05D004273 ORTHO05D005041 1.8e-109 400.2 332 59.0
Potri.001G237400 Populus trichocarpa HOM05D004273 ORTHO05D005041 3.0e-109 399.4 332 61.7
Prupe.6G080900 Prunus persica HOM05D004273 ORTHO05D005041 5.1e-109 398.7 327 60.6
Cpa.g.sc190.7 Carica papaya HOM05D004273 ORTHO05D005041 8.7e-109 397.9 332 59.9
Dinv01561 Davidia involucrata HOM05D004273 ORTHO05D005041 1.1e-108 397.5 338 59.8
Sabra09G0019900 Salix brachista HOM05D004273 ORTHO05D005041 3.3e-108 396.0 330 60.9
COL.COLO4_18478 Corchorus olitorius HOM05D004273 ORTHO05D005041 4.3e-108 395.6 333 58.0
Manes.04G033100 Manihot esculenta HOM05D004273 ORTHO05D005041 5.7e-108 395.2 314 60.5
ClCG02G020320 Citrullus lanatus HOM05D004273 ORTHO05D005041 9.7e-108 394.4 314 59.6
TAR636G0691 Trochodendron aralioides HOM05D004273 ORTHO05D005041 2.8e-107 392.9 333 58.6
Actinidia07045 Actinidia chinensis HOM05D004273 ORTHO05D005041 4.8e-107 392.1 340 60.3
Atru.chr3.3842_Atru.chr3.3843 Acer truncatum HOM05D004273 ORTHO05D005041 1.4e-106 390.6 340 59.4
CSS0043051 Camellia sinensis var. sinensis HOM05D004273 ORTHO05D005041 1.8e-106 390.2 340 59.4
Gorai.003G134500 Gossypium raimondii HOM05D004273 ORTHO05D005041 2.4e-106 389.8 333 58.3
Gohir.A03G040200 Gossypium hirsutum HOM05D004273 ORTHO05D005041 5.3e-106 388.7 333 58.3
MD11G1142800 Malus domestica HOM05D004273 ORTHO05D005041 1.2e-105 387.5 309 61.5
THA.LOC104799449 Tarenaya hassleriana HOM05D004273 ORTHO05D005041 1.2e-105 387.5 345 55.4
Gohir.D03G127800 Gossypium hirsutum HOM05D004273 ORTHO05D005041 2.0e-105 386.7 333 58.0
Thecc.09G325000 Theobroma cacao HOM05D004273 ORTHO05D005041 2.6e-105 386.3 334 57.5
Lj1A156G61 Lonicera japonica HOM05D004273 ORTHO05D005041 3.4e-105 386.0 334 60.8
Eucgr.B02383 Eucalyptus grandis HOM05D004273 ORTHO05D005041 5.9e-105 385.2 336 56.2
Aa31LG4G15500 Aethionema arabicum HOM05D004273 ORTHO05D005041 1.0e-104 384.4 337 56.7
MD03G1096600 Malus domestica HOM05D004273 ORTHO05D005041 1.0e-104 384.4 332 59.0
CsaV3_6G017020 Cucumis sativus L. HOM05D004273 ORTHO05D005041 1.7e-104 383.6 314 58.6
AL5G25280 Arabidopsis lyrata HOM05D004273 ORTHO05D005041 1.4e-103 380.6 332 55.4
Carub.0005s1225 Capsella rubella HOM05D004273 ORTHO05D005041 1.9e-103 380.2 332 56.6
Sed0008303 Sechium edule HOM05D004273 ORTHO05D005041 1.9e-103 380.2 319 57.4
GSVIVG01025001001 Vitis vinifera HOM05D004273 ORTHO05D005041 1.9e-103 380.2 314 62.1
Sp5g15230 Schrenkiella parvula HOM05D004273 ORTHO05D005041 4.2e-103 379.0 347 53.9
AT3G46450 Arabidopsis thaliana HOM05D004273 ORTHO05D005041 9.3e-103 377.9 333 55.3
Haze_24060 Corylus avellana HOM05D004273 ORTHO05D005041 9.3e-103 377.9 364 54.1
RcHm_v2.0_Chr5g0063781 Rosa chinensis HOM05D004273 ORTHO05D005041 1.2e-102 377.5 307 59.9
PGSC0003DMG400030404 Solanum tuberosum HOM05D004273 ORTHO05D005041 1.2e-102 377.5 338 57.7
CARHR155380 Cardamine hirsuta HOM05D004273 ORTHO05D005041 2.7e-102 376.3 347 53.3
FvH4_3g35600 Fragaria vesca HOM05D004273 ORTHO05D005041 7.9e-102 374.8 341 54.8
CAN.G394.46 Capsicum annuum HOM05D004273 ORTHO05D005041 1.0e-101 374.4 338 56.5
FAN21G1625 Fragaria x ananassa HOM05D004273 ORTHO05D005041 1.8e-101 373.6 339 54.6
A06p27020 Brassica napus HOM05D004273 ORTHO05D005041 3.0e-101 372.9 329 54.1
BraA06t25640Z Brassica rapa HOM05D004273 ORTHO05D005041 3.0e-101 372.9 330 55.2
BcaC01g02262 Brassica carinata HOM05D004273 ORTHO05D005041 5.1e-101 372.1 329 53.8
arahy.Tifrunner.gnm1.ann1.44D9RB Arachis hypogaea HOM05D004273 ORTHO05D005041 8.8e-101 371.3 338 56.2
Peaxi162Scf00679g00214 Petunia axillaris HOM05D004273 ORTHO05D005041 1.1e-100 370.9 318 59.4
Sopen06g032400 Solanum pennellii HOM05D004273 ORTHO05D005041 1.5e-100 370.5 374 53.5
arahy.Tifrunner.gnm1.ann1.0ME452 Arachis hypogaea HOM05D004273 ORTHO05D005041 1.9e-100 370.2 338 56.2
TWI79G1222 Tripterygium wilfordii HOM05D004273 ORTHO05D005041 1.9e-100 370.2 333 56.5
BolC3t19006H Brassica oleracea HOM05D004273 ORTHO05D005041 2.5e-100 369.8 329 53.5
Phvul.011G065600 Phaseolus vulgaris HOM05D004273 ORTHO05D005041 2.5e-100 369.8 344 55.8
MELO3C013689.2 Cucumis melo HOM05D004273 ORTHO05D005041 3.3e-100 369.4 327 55.4
C03p67250 Brassica napus HOM05D004273 ORTHO05D005041 4.3e-100 369.0 329 53.5
Ca_19181_v3 Cicer arietinum L. HOM05D004273 ORTHO05D005041 5.7e-100 368.6 344 54.9
Thhalv10002507m.g Eutrema salsugineum HOM05D004273 ORTHO05D005041 5.7e-100 368.6 348 52.9
PSO339G3737 Papaver somniferum HOM05D004273 ORTHO05D005041 5.7e-100 368.6 330 54.2
Solyc06g075980.3 Solanum lycopersicum HOM05D004273 ORTHO05D005041 1.7e-99 367.1 316 58.9
Dinv31442 Davidia involucrata HOM05D004273 ORTHO05D005041 2.2e-99 366.7 333 55.6
CSS0029075 Camellia sinensis var. sinensis HOM05D004273 ORTHO05D005041 3.7e-99 365.9 342 57.0
PSO384G1393 Papaver somniferum HOM05D004273 ORTHO05D005041 5.3e-98 362.1 332 54.2
Medtr4g063605 Medicago truncatula HOM05D004273 ORTHO05D005041 6.9e-98 361.7 336 54.5
FAN11G1845 Fragaria x ananassa HOM05D004273 ORTHO05D005041 9.1e-98 361.3 348 53.7
Glyma.11G141100 Glycine max HOM05D004273 ORTHO05D005041 9.1e-98 361.3 337 54.6
VMungo1127G1030 Vigna mungo HOM05D004273 ORTHO05D005041 9.1e-98 361.3 342 54.4
BcaB02g10723 Brassica carinata HOM05D004273 ORTHO05D005041 1.2e-97 360.9 330 53.3
FAN16G0116 Fragaria x ananassa HOM05D004273 ORTHO05D005041 1.2e-97 360.9 333 54.1
TPR.G10209 Trifolium pratense HOM05D004273 ORTHO05D005041 1.5e-97 360.5 332 54.8
MSTRG.1791 Avicennia marina HOM05D004273 ORTHO05D005041 7.7e-97 358.2 352 54.3
Lalb_Chr19g0137751 Lupinus albus HOM05D004273 ORTHO05D005041 1.0e-96 357.8 337 54.9
Aqoxy4G02965 Aquilegia oxysepala HOM05D004273 ORTHO05D005041 2.2e-96 356.7 339 53.7
MBI05_g06541_MAGBIO Magnolia biondii HOM05D004273 ORTHO05D005041 2.2e-96 356.7 348 52.6
Duzib168G0407 Durio zibethinus HOM05D004273 ORTHO05D005041 5.0e-96 355.5 343 54.2
Hma1.2p1_0533F.1_g173530 Hydrangea macrophylla HOM05D004273 ORTHO05D005041 5.0e-96 355.5 331 54.4
Lj3g0025927 Lotus japonicus HOM05D004273 ORTHO05D005041 5.0e-96 355.5 337 52.8
TWI31G0117 Tripterygium wilfordii HOM05D004273 ORTHO05D005041 1.9e-95 353.6 345 53.3
arahy.Tifrunner.gnm1.ann1.N7EFUM Arachis hypogaea HOM05D004273 ORTHO05D005041 7.2e-95 351.7 338 53.0
arahy.Tifrunner.gnm1.ann1.T00HES Arachis hypogaea HOM05D004273 ORTHO05D005041 9.4e-95 351.3 342 52.6
Rhsim13G0085100 Rhododendron simsii HOM05D004273 ORTHO05D005041 9.4e-95 351.3 349 53.0
Lalb_Chr03g0026761 Lupinus albus HOM05D004273 ORTHO05D005041 1.2e-94 350.9 335 54.6
Glyma.15G039800 Glycine max HOM05D004273 ORTHO05D005041 2.1e-94 350.1 337 53.7
Phvul.L004243 Phaseolus vulgaris HOM05D004273 ORTHO05D005041 2.1e-94 350.1 309 54.4
Psat7g217720 Pisum sativum HOM05D004273 ORTHO05D005041 7.9e-94 348.2 304 55.3
Oeu017093.1 Olea europaea HOM05D004273 ORTHO05D005041 1.0e-93 347.8 348 51.7
Migut.E01325 Erythranthe guttata HOM05D004273 ORTHO05D005041 1.4e-93 347.4 352 53.7
SalBow8G5260 Salvia bowleyana HOM05D004273 ORTHO05D005041 2.3e-93 346.7 352 52.6
Cc01_g12600 Coffea canephora HOM05D004273 ORTHO05D005041 3.0e-93 346.3 316 55.1
VMungo1080G0602 Vigna mungo HOM05D004273 ORTHO05D005041 8.8e-93 344.7 311 53.4
Zm00001eb062630 Zea mays HOM05D004273 ORTHO05D005041 3.3e-92 342.8 306 53.3
DCAR_005310 Daucus carota HOM05D004273 ORTHO05D005041 7.4e-92 341.7 337 51.3
ECA236G0424 Erigeron canadensis HOM05D004273 ORTHO05D005041 1.3e-91 340.9 309 55.3
Lalb_Chr24g0394211 Lupinus albus HOM05D004273 ORTHO05D005041 1.3e-91 340.9 325 52.9
CSS0019329 Camellia sinensis var. sinensis HOM05D004273 ORTHO05D005041 2.2e-91 340.1 344 51.2
HanXRQChr02g0044491 Helianthus annuus HOM05D004273 ORTHO05D005041 2.8e-91 339.7 345 52.2
Ciclev10028607m.g Citrus clementina HOM05D004273 ORTHO05D005041 8.2e-91 338.2 278 60.4
Lsat_1_v5_gn_8_77981 Lactuca sativa HOM05D000739 ORTHO05D005041 1.2e-89 334.3 338 51.5
Os03g0820900 Oryza sativa ssp. japonica HOM05D004273 ORTHO05D005041 3.4e-89 332.8 331 51.1
SGA_v2.0_scaffold111G31385 Striga asiatica HOM05D004273 ORTHO05D005041 3.4e-89 332.8 352 51.1
Glyma.13G334700 Glycine max HOM05D004273 ORTHO05D005041 2.9e-88 329.7 332 50.9
Sc06g0002640 Simmondsia chinensis HOM05D004273 ORTHO05D005041 1.1e-87 327.8 333 48.3
Actinidia02958 Actinidia chinensis HOM05D004273 ORTHO05D005041 7.2e-87 325.1 302 53.0
EL10Ac2g03411 Beta vulgaris HOM05D004273 ORTHO05D005041 6.7e-85 318.5 344 48.5
CDE04G0924 Ceratophyllum demersum HOM05D004273 ORTHO05D005041 6.7e-85 318.5 332 50.6
Ah.16g107130 Amaranthus hybridus HOM05D004273 ORTHO05D005041 3.7e-83 312.8 340 45.3
CAN.G1013.9 Capsicum annuum HOM05D004273 ORTHO05D005041 6.3e-83 312.0 316 47.8
Solyc05g054570.3 Solanum lycopersicum HOM05D004273 ORTHO05D005041 8.2e-83 311.6 334 45.5
Lsat_1_v5_gn_2_116561 Lactuca sativa HOM05D004273 ORTHO05D005041 1.1e-82 311.2 344 47.7
HPP92_019085 Vanilla planifolia HOM05D004273 ORTHO05D005041 1.1e-82 311.2 333 47.1
Sopen05g033050 Solanum pennellii HOM05D004273 ORTHO05D005041 2.4e-82 310.1 334 45.2
PGSC0003DMG400023525 Solanum tuberosum HOM05D004273 ORTHO05D005041 2.0e-81 307.0 334 45.5
HanXRQChr14g0458231 Helianthus annuus HOM05D004273 ORTHO05D005041 2.6e-81 306.6 306 50.0
Nitab4.5_0001831g0040 Nicotiana tabacum HOM05D004273 ORTHO05D005041 2.6e-81 306.6 334 47.6
AUR62038361 Chenopodium quinoa HOM05D004273 ORTHO05D005041 3.5e-81 306.2 333 46.5
Nitab4.5_0014877g0010 Nicotiana tabacum HOM05D004273 ORTHO05D005041 1.0e-80 304.7 334 47.3
Peaxi162Scf00015g00152 Petunia axillaris HOM05D004273 ORTHO05D005041 1.0e-80 304.7 333 46.5
AUR62040968 Chenopodium quinoa HOM05D004273 ORTHO05D005041 2.2e-80 303.5 334 46.7
Cc02_g08070 Coffea canephora HOM05D004273 ORTHO05D005041 1.5e-79 300.8 340 44.7
ECA238G2787 Erigeron canadensis HOM05D004273 ORTHO05D005041 7.2e-79 298.5 344 45.3
Ah.08g219160 Amaranthus hybridus HOM05D004273 ORTHO05D005041 1.6e-78 297.4 269 56.5
ATR0559G270 Amborella trichopoda HOM05D004273 ORTHO05D005041 1.6e-78 297.4 299 49.5
HanXRQChr07g0201161 Helianthus annuus HOM05D004273 ORTHO05D005041 2.7e-78 296.6 302 49.7
Nitab4.5_0001838g0010 Nicotiana tabacum HOM05D004273 ORTHO05D005041 4.0e-77 292.7 329 48.6
Nn2g10411 Nelumbo nucifera HOM05D004273 ORTHO05D005041 3.3e-76 289.7 254 56.7
SEGI_06894 Sequoiadendron giganteum HOM05D004273 ORTHO05D005041 1.2e-70 271.2 348 42.5
Nitab4.5_0001304g0060 Nicotiana tabacum HOM05D004273 ORTHO05D005041 2.3e-69 266.9 182 67.0
vmacro03093 Vaccinium macrocarpon HOM05D004273 ORTHO05D005041 1.7e-67 260.8 271 52.8
Zm00001eb211720 Zea mays HOM05D004273 ORTHO05D005041 1.4e-66 257.7 245 51.0
unitig_747.g21363 Utricularia gibba HOM05D004273 ORTHO05D005041 2.0e-65 253.8 309 44.0
Lj1A935G50 Lonicera japonica HOM05D004273 ORTHO05D005041 2.7e-65 253.4 261 50.6
Pp3c9_11070 Physcomitrium patens HOM05D004273 ORTHO05D005041 9.2e-58 228.4 339 38.9
AagrBONN_evm.TU.Sc2ySwM_117.239 Anthoceros agrestis HOM05D004273 ORTHO05D005041 1.6e-57 227.6 301 41.2
SMO266G0022 Selaginella moellendorffii HOM05D004273 ORTHO05D005041 1.7e-56 224.2 300 38.3
Hund12542 Selenicereus undatus HOM05D004273 ORTHO05D005041 2.7e-49 200.3 190 49.5
Pp3c14_19130 Physcomitrium patens HOM05D004273 ORTHO05D005041 2.1e-46 190.7 357 32.5
Mapoly0153s0026 Marchantia polymorpha HOM05D004273 ORTHO05D005041 1.2e-44 184.9 195 46.7
Lsat_1_v5_gn_2_116541 Lactuca sativa HOM05D004109 ORTHO05D005867 2.7e-41 173.7 178 46.1
Actinidia07731 Actinidia chinensis HOM05D004273 ORTHO05D005041 4.7e-38 162.9 150 53.3
CBR_g4074 Chara braunii HOM05D004273 ORTHO05D005041 3.9e-32 143.3 299 29.8
Actinidia07724 Actinidia chinensis HOM05D004273 ORTHO05D005041 3.4e-28 130.2 159 42.1
DCAR_027649 Daucus carota HOM05D004273 ORTHO05D005041 3.4e-28 130.2 198 39.4
Lj8C85T7 Lonicera japonica HOM05D004273 ORTHO05D005041 6.4e-27 125.9 109 55.0
FAN11G3764 Fragaria x ananassa HOM05D004273 ORTHO05D005041 6.9e-21 105.9 114 53.5
unitig_748.g7756 Utricularia gibba HOM05D004273 ORTHO05D005041 1.9e-18 97.8 176 36.4
TPR.G17285 Trifolium pratense HOM05D004273 ORTHO05D005041 1.2e-17 95.1 115 44.3
vmacro03094 Vaccinium macrocarpon HOM05D004273 ORTHO05D005041 1.7e-16 91.3 86 53.5
Ah.08g219150 Amaranthus hybridus HOM05D004273 ORTHO05D005041 3.0e-16 90.5 88 54.5
FvH4_3g35570 Fragaria vesca HOM05D004273 ORTHO05D005041 1.5e-12 78.2 55 65.5
BcaB06g28280 Brassica carinata HOM05D004273 ORTHO05D005041 7.4e-07 59.3 45 57.8
HPP92_019826 Vanilla planifolia HOM05D000050 ORTHO05D005041 1.3e-06 58.5 71 47.9


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