Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc06g0008150 Simmondsia chinensis HOM05D006841 ORTHO05D008607 1.5e-286 988.8 502 100.0
EL10Ac7g15887 Beta vulgaris HOM05D006841 ORTHO05D008607 3.2e-207 725.3 505 73.9
Prupe.6G052600 Prunus persica HOM05D006841 ORTHO05D008607 3.6e-203 711.8 504 71.2
AUR62009700 Chenopodium quinoa HOM05D006841 ORTHO05D008607 7.5e-201 704.1 504 71.6
Hund05042 Selenicereus undatus HOM05D006841 ORTHO05D008607 2.4e-199 699.1 504 71.2
Thecc.09G353800 Theobroma cacao HOM05D006841 ORTHO05D008607 3.2e-199 698.7 506 69.8
CSS0042618 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 4.1e-199 698.4 507 68.8
MD03G1062600 Malus domestica HOM05D006841 ORTHO05D008607 9.2e-199 697.2 503 69.8
AUR62036246 Chenopodium quinoa HOM05D006841 ORTHO05D008607 6.0e-198 694.5 504 70.8
MD11G1066200 Malus domestica HOM05D006841 ORTHO05D008607 1.0e-197 693.7 503 69.6
Potri.009G075200 Populus trichocarpa HOM05D006841 ORTHO05D008607 7.3e-196 687.6 505 69.5
Ciclev10028251m.g Citrus clementina HOM05D006841 ORTHO05D008607 9.5e-196 687.2 467 72.2
Dinv28672 Davidia involucrata HOM05D006841 ORTHO05D008607 4.7e-195 684.9 494 69.6
TAR369G0096 Trochodendron aralioides HOM05D006841 ORTHO05D008607 1.1e-194 683.7 503 68.2
RcHm_v2.0_Chr5g0070721 Rosa chinensis HOM05D006841 ORTHO05D008607 1.4e-194 683.3 503 69.0
Actinidia34467 Actinidia chinensis HOM05D006841 ORTHO05D008607 8.9e-194 680.6 509 67.0
FvH4_3g39290 Fragaria vesca HOM05D006841 ORTHO05D008607 8.9e-194 680.6 492 69.1
FAN11G0941 Fragaria x ananassa HOM05D006841 ORTHO05D008607 2.0e-193 679.5 499 68.9
Ah.08g215320 Amaranthus hybridus HOM05D006841 ORTHO05D008607 3.4e-193 678.7 504 69.0
Atru.chr3.4145 Acer truncatum HOM05D006841 ORTHO05D008607 4.4e-193 678.3 476 70.2
COL.COLO4_11072 Corchorus olitorius HOM05D006841 ORTHO05D008607 7.6e-193 677.6 512 68.0
Ah.15g096690 Amaranthus hybridus HOM05D006841 ORTHO05D008607 9.9e-193 677.2 504 68.1
FAN25G3694 Fragaria x ananassa HOM05D006841 ORTHO05D008607 9.9e-193 677.2 496 68.5
Duzib170G1072 Durio zibethinus HOM05D006841 ORTHO05D008607 4.9e-192 674.9 506 68.2
FAN21G2904 Fragaria x ananassa HOM05D006841 ORTHO05D008607 6.4e-192 674.5 496 68.5
Duzib168G0722 Durio zibethinus HOM05D006841 ORTHO05D008607 2.4e-191 672.5 508 68.7
Eucgr.B02230 Eucalyptus grandis HOM05D006841 ORTHO05D008607 4.1e-191 671.8 518 66.0
Manes.02G217600 Manihot esculenta HOM05D006841 ORTHO05D008607 9.2e-191 670.6 512 67.4
Gohir.A05G108000 Gossypium hirsutum HOM05D006841 ORTHO05D008607 2.7e-190 669.1 505 66.9
Gorai.009G112400 Gossypium raimondii HOM05D006841 ORTHO05D008607 4.6e-190 668.3 505 67.1
TAR636G1839 Trochodendron aralioides HOM05D006841 ORTHO05D008607 4.6e-190 668.3 509 67.8
CiPaw.14G056400 Carya illinoinensis HOM05D006841 ORTHO05D008607 7.8e-190 667.5 511 67.9
Sabra09G0057100 Salix brachista HOM05D006841 ORTHO05D008607 1.7e-189 666.4 504 67.5
Gohir.D05G108200 Gossypium hirsutum HOM05D006841 ORTHO05D008607 3.0e-189 665.6 505 66.9
CSS0014141 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 5.6e-188 661.4 507 65.9
CANSAT54G0320 Cannabis sativa HOM05D006841 ORTHO05D008607 1.2e-187 660.2 447 72.3
CiPaw.13G073200 Carya illinoinensis HOM05D006841 ORTHO05D008607 1.2e-187 660.2 513 66.5
vmacro14612 Vaccinium macrocarpon HOM05D006841 ORTHO05D008607 1.1e-186 657.1 509 64.4
Glyma.18G059800 Glycine max HOM05D006841 ORTHO05D008607 1.4e-186 656.8 455 71.2
PGR102G0989 Punica granatum HOM05D006841 ORTHO05D008607 9.0e-186 654.1 448 70.5
Haze_24381 Corylus avellana HOM05D006841 ORTHO05D008607 1.5e-185 653.3 539 63.3
CsaV3_6G016010 Cucumis sativus L. HOM05D006841 ORTHO05D008607 1.5e-185 653.3 452 69.7
SalBow2G2391 Salvia bowleyana HOM05D006841 ORTHO05D008607 1.5e-185 653.3 471 68.2
arahy.Tifrunner.gnm1.ann1.1QT3IR Arachis hypogaea HOM05D006841 ORTHO05D008607 2.6e-185 652.5 455 70.3
Phvul.006G071400 Phaseolus vulgaris HOM05D006841 ORTHO05D008607 2.6e-185 652.5 512 65.0
Rhsim01G0239400 Rhododendron simsii HOM05D006841 ORTHO05D008607 4.4e-185 651.7 508 65.2
arahy.Tifrunner.gnm1.ann1.UR06JS Arachis hypogaea HOM05D006841 ORTHO05D008607 1.3e-184 650.2 455 69.7
MELO3C026835.2 Cucumis melo HOM05D006841 ORTHO05D008607 3.8e-184 648.7 452 69.5
Glyma.11G167300 Glycine max HOM05D006841 ORTHO05D008607 8.4e-184 647.5 522 63.4
TWI79G1747 Tripterygium wilfordii HOM05D006841 ORTHO05D008607 8.4e-184 647.5 512 66.0
QL01p039597 Quercus lobata HOM05D006841 ORTHO05D008607 1.9e-183 646.4 518 64.9
HanXRQChr01g0011601 Helianthus annuus HOM05D006841 ORTHO05D008607 5.4e-183 644.8 480 66.7
ClCG02G019390 Citrullus lanatus HOM05D006841 ORTHO05D008607 9.3e-183 644.0 452 68.4
PGSC0003DMG401028313 Solanum tuberosum HOM05D006841 ORTHO05D008607 2.1e-182 642.9 452 70.8
Solyc05g012140.3 Solanum lycopersicum HOM05D006841 ORTHO05D008607 2.7e-182 642.5 452 70.6
Sopen05g006930 Solanum pennellii HOM05D006841 ORTHO05D008607 4.6e-182 641.7 452 70.4
Psat5g157440 Pisum sativum HOM05D006841 ORTHO05D008607 3.0e-181 639.0 442 70.1
Lj6g0024894 Lotus japonicus HOM05D006841 ORTHO05D008607 2.1e-179 632.9 516 62.6
Peaxi162Scf01324g00238 Petunia axillaris HOM05D006841 ORTHO05D008607 2.1e-179 632.9 464 69.2
Sed0019546 Sechium edule HOM05D006841 ORTHO05D008607 4.8e-179 631.7 451 67.0
Medtr3g465390 Medicago truncatula HOM05D006841 ORTHO05D008607 1.1e-178 630.6 443 69.1
CAN.G707.10 Capsicum annuum HOM05D006841 ORTHO05D008607 1.8e-178 629.8 447 70.2
Oeu018490.1 Olea europaea HOM05D006841 ORTHO05D008607 3.1e-178 629.0 471 66.7
MSTRG.12683 Avicennia marina HOM05D006841 ORTHO05D008607 9.0e-178 627.5 472 66.3
Lalb_Chr18g0051231 Lupinus albus HOM05D006841 ORTHO05D008607 4.5e-177 625.2 476 65.1
TPR.G32925 Trifolium pratense HOM05D006841 ORTHO05D008607 5.8e-177 624.8 441 68.9
Aqoxy1G01268 Aquilegia oxysepala HOM05D006841 ORTHO05D008607 7.1e-175 617.8 489 65.0
Lj2A1088G41 Lonicera japonica HOM05D006841 ORTHO05D008607 1.3e-173 613.6 431 70.3
Lsat_1_v5_gn_5_173260 Lactuca sativa HOM05D006841 ORTHO05D008607 3.9e-173 612.1 456 66.7
VMungo0540G0160 Vigna mungo HOM05D006841 ORTHO05D008607 1.3e-171 607.1 488 64.3
Migut.N00773 Erythranthe guttata HOM05D006841 ORTHO05D008607 5.3e-170 601.7 440 66.8
ECA248G2088 Erigeron canadensis HOM05D006841 ORTHO05D008607 4.5e-169 598.6 416 70.4
PSO017G2874 Papaver somniferum HOM05D006841 ORTHO05D008607 5.8e-169 598.2 483 65.0
PSO349G0316 Papaver somniferum HOM05D006841 ORTHO05D008607 1.9e-167 593.2 484 65.1
MBI15_g21765_MAGBIO Magnolia biondii HOM05D006841 ORTHO05D008607 3.2e-167 592.4 442 65.8
unitig_94.g28363 Utricularia gibba HOM05D006841 ORTHO05D008607 9.3e-167 590.9 441 65.8
CARHR123400 Cardamine hirsuta HOM05D006841 ORTHO05D008607 6.7e-165 584.7 512 60.0
Thhalv10016546m.g Eutrema salsugineum HOM05D006841 ORTHO05D008607 4.3e-164 582.0 512 60.9
THA.LOC104800754 Tarenaya hassleriana HOM05D006841 ORTHO05D008607 4.3e-164 582.0 509 60.1
AT2G30100 Arabidopsis thaliana HOM05D006841 ORTHO05D008607 8.2e-163 577.8 513 60.6
Carub.0004s1120 Capsella rubella HOM05D006841 ORTHO05D008607 1.1e-162 577.4 514 59.5
AL4G24870 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 1.8e-162 576.6 513 60.4
Sp4g12660 Schrenkiella parvula HOM05D006841 ORTHO05D008607 2.4e-162 576.2 509 60.3
C04p58980 Brassica napus HOM05D006841 ORTHO05D008607 5.3e-162 575.1 513 59.3
BolC4t27410H Brassica oleracea HOM05D006841 ORTHO05D008607 1.7e-160 570.1 513 58.7
SGA_v2.0_scaffold104G30129 Striga asiatica HOM05D006841 ORTHO05D008607 1.1e-159 567.4 450 64.4
Ca_14982_v3 Cicer arietinum L. HOM05D006841 ORTHO05D008607 1.4e-159 567.0 416 68.0
Aa31LG5G6580 Aethionema arabicum HOM05D006841 ORTHO05D008607 2.5e-159 566.2 517 57.6
BcaC02g08056 Brassica carinata HOM05D006841 ORTHO05D008607 2.1e-158 563.1 506 59.5
BraA04t17817Z Brassica rapa HOM05D006841 ORTHO05D008607 7.9e-158 561.2 517 57.1
A04p22780 Brassica napus HOM05D006841 ORTHO05D008607 1.8e-157 560.1 515 57.1
CDE06G2104 Ceratophyllum demersum HOM05D006841 ORTHO05D008607 5.1e-157 558.5 445 61.1
GSVIVG01024686001 Vitis vinifera HOM05D006841 ORTHO05D008607 1.7e-147 526.9 381 69.0
Cc01_g14600 Coffea canephora HOM05D006841 ORTHO05D008607 2.9e-144 516.2 398 63.8
DCAR_007349 Daucus carota HOM05D006841 ORTHO05D008607 2.6e-140 503.1 354 68.1
Zm00001eb286480 Zea mays HOM05D006841 ORTHO05D008607 3.4e-137 492.7 421 57.2
ATR0174G035 Amborella trichopoda HOM05D006841 ORTHO05D008607 4.5e-137 492.3 427 58.1
Os05g0353300 Oryza sativa ssp. japonica HOM05D006841 ORTHO05D008607 2.6e-132 476.5 457 51.9
AL59U10050 Arabidopsis lyrata HOM05D006841 ORTHO05D008607 1.6e-121 440.7 451 56.1
Actinidia23875 Actinidia chinensis HOM05D006841 ORTHO05D008607 7.7e-121 438.3 297 72.4
SEGI_38470 Sequoiadendron giganteum HOM05D006841 ORTHO05D008607 3.6e-110 402.9 424 48.6
HPP92_025104 Vanilla planifolia HOM05D006841 ORTHO05D008607 1.2e-105 387.9 351 55.6
Hma1.2p1_0146F.1_g065520 Hydrangea macrophylla HOM05D006841 ORTHO05D008607 9.2e-98 361.7 256 67.6
Mapoly0068s0098 Marchantia polymorpha HOM05D006841 ORTHO05D008607 1.7e-91 340.9 467 41.3
CSS0012316 Camellia sinensis var. sinensis HOM05D006841 ORTHO05D008607 2.8e-86 323.6 423 44.7
Nn2g10947 Nelumbo nucifera HOM05D006841 ORTHO05D008607 7.5e-84 315.5 234 67.5
Nn2g13216 Nelumbo nucifera HOM05D006841 ORTHO05D008607 4.3e-79 299.7 218 68.3
Pp3c12_8330 Physcomitrium patens HOM05D006841 ORTHO05D008607 1.5e-71 274.6 434 37.1
SMO304G0125 Selaginella moellendorffii HOM05D006841 ORTHO05D008607 9.9e-68 261.9 418 36.4
Cpa.g.sc2.394 Carica papaya HOM05D006841 ORTHO05D008607 1.4e-66 258.1 150 81.3
MD11G1194000 Malus domestica HOM05D006841 ORTHO05D008607 1.7e-59 234.6 134 82.8
Oeu034210.1 Olea europaea HOM05D009051 ORTHO05D000140 4.9e-43 179.9 171 52.6
AagrBONN_evm.TU.Sc2ySwM_117.787 Anthoceros agrestis HOM05D006841 ORTHO05D008607 4.6e-33 146.7 190 42.1
Oeu034514.1 Olea europaea HOM05D006841 ORTHO05D008607 4.6e-33 146.7 125 58.4
Oeu034517.1 Olea europaea HOM05D006841 ORTHO05D008607 1.0e-32 145.6 229 39.3
Oeu034518.1 Olea europaea HOM05D006841 ORTHO05D008607 1.8e-32 144.8 148 52.0
Oeu034513.1 Olea europaea HOM05D006841 ORTHO05D008607 1.3e-30 138.7 229 37.6
VMungo0331G0799 Vigna mungo HOM05D000172 ORTHO05D004529 1.6e-25 121.7 107 53.3
Oeu019495.1 Olea europaea HOM05D006841 ORTHO05D008607 2.4e-13 81.3 89 44.9


User provided reference genes

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