Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc06g0004450 Simmondsia chinensis HOM05D018396 ORTHO05D018884 1.2e-61 239.6 119 100.0
Sc20g0002990 Simmondsia chinensis HOM05D018396 ORTHO05D018884 9.6e-38 160.2 204 47.5
Sc11g0004190 Simmondsia chinensis HOM05D018396 ORTHO05D018884 9.6e-30 133.7 69 95.7
Sc04g0007070 Simmondsia chinensis HOM05D018396 ORTHO05D018884 2.8e-29 132.1 69 92.8
CAN.G74.31 Capsicum annuum HOM05D018396 ORTHO05D018884 3.1e-12 75.5 63 54.0
CAN.G2114.1 Capsicum annuum HOM05D018396 ORTHO05D018884 9.1e-12 73.9 63 54.0
Hma1.2p1_1035F.1_g250490 Hydrangea macrophylla HOM05D000876 ORTHO05D000285 1.1e-09 67.0 116 32.8
CAN.G10.12 Capsicum annuum HOM05D000541 ORTHO05D018884 2.5e-09 65.9 59 50.8
Medtr0961s0020 Medicago truncatula HOM05D000876 ORTHO05D000285 1.0e-07 60.5 42 64.3
CAN.G79.24 Capsicum annuum HOM05D000033 ORTHO05D001614 1.4e-07 60.1 46 58.7
Lj5g0006232 Lotus japonicus HOM05D000876 ORTHO05D000285 1.4e-07 60.1 39 69.2
Lj1g0012065 Lotus japonicus HOM05D000876 ORTHO05D000285 1.8e-07 59.7 40 65.0
Lj6g0025621 Lotus japonicus HOM05D000876 ORTHO05D000285 5.1e-07 58.2 38 68.4
QL02p025824 Quercus lobata HOM05D013302 ORTHO05D015047 8.8e-07 57.4 67 40.3
arahy.Tifrunner.gnm1.ann1.Z2QP4M Arachis hypogaea HOM05D000034 ORTHO05D000037 1.5e-06 56.6 170 24.1
Medtr2g435870 Medicago truncatula HOM05D000876 ORTHO05D000285 1.5e-06 56.6 66 45.5
arahy.Tifrunner.gnm1.ann1.PEG6DJ Arachis hypogaea HOM05D000034 ORTHO05D000037 2.0e-06 56.2 170 24.1
Medtr1g080080 Medicago truncatula HOM05D000876 ORTHO05D000285 4.4e-06 55.1 38 63.2
Medtr2g018710 Medicago truncatula HOM05D000876 ORTHO05D000285 4.4e-06 55.1 38 63.2
Medtr2g086350 Medicago truncatula HOM05D000876 ORTHO05D000285 4.4e-06 55.1 38 63.2
Medtr5g054570 Medicago truncatula HOM05D000876 ORTHO05D000285 4.4e-06 55.1 38 63.2
arahy.Tifrunner.gnm1.ann1.R6BV2D Arachis hypogaea HOM05D000876 ORTHO05D000285 5.7e-06 54.7 170 23.5
FvH4_6g53022 Fragaria vesca HOM05D000876 ORTHO05D000285 5.7e-06 54.7 58 44.8
arahy.Tifrunner.gnm1.ann1.L4SQ9F Arachis hypogaea HOM05D000034 ORTHO05D000037 7.4e-06 54.3 170 24.7
arahy.Tifrunner.gnm1.ann1.2911W9 Arachis hypogaea HOM05D000876 ORTHO05D000285 9.7e-06 53.9 170 23.5
arahy.Tifrunner.gnm1.ann1.78M2T9 Arachis hypogaea HOM05D000876 ORTHO05D000285 9.7e-06 53.9 43 53.5
QL01p041709 Quercus lobata HOM05D000876 ORTHO05D000285 9.7e-06 53.9 193 25.4
QL03p014458 Quercus lobata HOM05D000876 ORTHO05D000285 9.7e-06 53.9 193 25.4
QL06p033300 Quercus lobata HOM05D000876 ORTHO05D000285 9.7e-06 53.9 193 25.4


User provided reference genes

Program Settings