Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc06g0004260 Simmondsia chinensis HOM05D006933 ORTHO05D009629 6.2e-123 444.1 221 100.0
Sc19g0006270 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.0e-40 168.7 302 39.7
Sc07g0006510 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.5e-39 166.4 246 41.9
Sc16g0003440 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.2e-38 164.1 341 37.5
Sc18g0002450 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.2e-35 153.3 271 36.2
Sc16g0006020 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.9e-35 152.9 147 57.1
Sc25g0003910 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.2e-34 149.4 193 46.6
Sc06g0004220 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.3e-31 139.4 300 33.3
Sc10g0006460 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.2e-29 132.1 90 71.1
Sc19g0006300 Simmondsia chinensis HOM05D006933 ORTHO05D009629 7.5e-28 128.3 275 34.2
Sc26g0001380 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.2e-27 126.7 83 72.3
Sc23g0003820 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.7e-27 125.9 90 71.1
Sc01g0005690 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.9e-27 125.6 83 68.7
Sc05g0005650 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.1e-26 122.5 91 65.9
Sc09g0006390 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.4e-26 122.1 91 68.1
Sc23g0004070 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.4e-26 122.1 89 66.3
Sc13g0005400 Simmondsia chinensis HOM05D006933 ORTHO05D009629 9.2e-26 121.3 86 62.8
Sc26g0003190 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.6e-25 120.6 92 65.2
Sc18g0006260 Simmondsia chinensis HOM05D006933 ORTHO05D009629 8.6e-24 114.8 265 35.5
Sc12g0005710 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.3e-23 112.8 313 28.1
Sc02g0004050 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.6e-23 112.1 93 55.9
Sc09g0006400 Simmondsia chinensis HOM05D006933 ORTHO05D009629 8.1e-22 108.2 216 39.4
Sc08g0005990 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.0e-21 105.9 69 68.1
Sc17g0003640 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.2e-21 105.5 66 69.7
Sc06g0006000 Simmondsia chinensis HOM05D006933 ORTHO05D009629 6.8e-21 105.1 88 59.1
Sc16g0005360 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.5e-20 104.0 275 30.5
Sc01g0006920 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.0e-20 103.6 93 52.7
Sc23g0004170 Simmondsia chinensis HOM05D006933 ORTHO05D009629 7.5e-20 101.7 85 56.5
Sc23g0004060 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.3e-19 100.9 165 41.8
Sc20g0002870 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.7e-19 99.4 93 53.8
Sc10g0006330 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.4e-18 95.5 135 43.7
Sc04g0003750 Simmondsia chinensis HOM05D006933 ORTHO05D009629 7.1e-18 95.1 82 57.3
Sc22g0003620 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.1e-17 93.6 186 39.8
Sc24g0000790 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.5e-17 92.8 55 76.4
Sc11g0005100 Simmondsia chinensis HOM05D006933 ORTHO05D009629 7.8e-17 91.7 83 56.6
Sc26g0002220 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.0e-16 89.7 266 28.9
Sc10g0006470 Simmondsia chinensis HOM05D006933 ORTHO05D009629 8.6e-16 88.2 101 51.5
Sc01g0002780 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.3e-15 85.9 91 46.2
Sc13g0006150 Simmondsia chinensis HOM05D006933 ORTHO05D009629 9.5e-15 84.7 139 36.0
Sc23g0004620 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.8e-14 83.2 73 57.5
Sc07g0005650 Simmondsia chinensis HOM05D013278 ORTHO05D009629 1.4e-13 80.9 77 51.9
Sc03g0004560 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.2e-13 79.0 59 62.7
Sc04g0003670 Simmondsia chinensis HOM05D006933 ORTHO05D009629 8.9e-13 78.2 57 61.4
Sc20g0003680 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.6e-12 76.6 92 44.6
Sc08g0005340 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.4e-12 75.9 59 61.0
Sc10g0007390 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.4e-12 75.9 86 47.7
Sc12g0007420 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.4e-12 75.9 218 29.8
Sc20g0003570 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.4e-12 75.9 207 29.0
Sc11g0005090 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.7e-11 73.9 63 49.2
Sc21g0005420 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.2e-11 73.6 57 59.6
Sc13g0006290 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.9e-11 72.4 46 71.7
Sc12g0008540 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.1e-10 71.2 120 37.5
Sc04g0003720 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.4e-10 70.9 55 63.6
Sc26g0002540 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.4e-10 70.9 75 53.3
Sc18g0005060 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.9e-10 70.5 70 62.9
Sc20g0004170 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.9e-10 70.5 58 60.3
Sc07g0005380 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.1e-10 69.3 69 59.4
Actinidia24024 Actinidia chinensis HOM05D023450 ORTHO05D023249 1.6e-09 67.4 88 38.6
Sc11g0005990 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.6e-09 67.4 48 64.6
Sc17g0002240 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.6e-09 67.4 84 39.3
Sc12g0005980 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.5e-09 66.2 62 54.8
Sc15g0002630 Simmondsia chinensis HOM05D001511 ORTHO05D009027 4.6e-09 65.9 70 57.1
Lj1g0024049 Lotus japonicus HOM05D008220 ORTHO05D010358 6.0e-09 65.5 89 34.8
Sc19g0006290 Simmondsia chinensis HOM05D006933 ORTHO05D009629 6.0e-09 65.5 64 59.4
Sc22g0002690 Simmondsia chinensis HOM05D000043 ORTHO05D030613 6.0e-09 65.5 199 27.6
Lj4g0014288 Lotus japonicus HOM05D008220 ORTHO05D010358 3.0e-08 63.2 87 34.5
Ah.16g108500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 3.9e-08 62.8 93 37.6
Lj3g0019996 Lotus japonicus HOM05D008220 ORTHO05D010358 1.1e-07 61.2 92 34.8
Lj5g0003699 Lotus japonicus HOM05D008220 ORTHO05D010358 1.5e-07 60.8 76 38.2
Sc03g0007270 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.5e-07 60.8 41 65.9
Duzib170G0053 Durio zibethinus HOM05D037386 ORTHO05D035091 2.5e-07 60.1 86 33.7
RhsimUnG0101100 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.3e-07 59.3 101 34.7
Sc14g0002620 Simmondsia chinensis HOM05D009209 ORTHO05D011705 4.3e-07 59.3 76 35.5
Ah.01g013230 Amaranthus hybridus HOM05D008762 ORTHO05D011252 5.6e-07 58.9 82 35.4
Ah.07g196620 Amaranthus hybridus HOM05D008762 ORTHO05D031041 5.6e-07 58.9 78 33.3
vmacro11531 Vaccinium macrocarpon HOM05D010265 ORTHO05D009356 9.6e-07 58.2 103 30.1
LjContig00127g0011774 Lotus japonicus HOM05D008220 ORTHO05D010358 1.2e-06 57.8 80 33.8
vmacro12740 Vaccinium macrocarpon HOM05D000625 ORTHO05D000467 1.2e-06 57.8 79 35.4
Actinidia11796 Actinidia chinensis HOM05D002604 ORTHO05D009356 1.6e-06 57.4 77 33.8
Ah.05g174560 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.1e-06 57.0 87 28.7
Ah.12g063050 Amaranthus hybridus HOM05D000030 ORTHO05D000009 2.1e-06 57.0 84 34.5
Lj6g0019563 Lotus japonicus HOM05D008220 ORTHO05D010358 2.1e-06 57.0 79 39.2
Rhsim13G0125400 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.8e-06 56.6 76 34.2
Lj3g0027860 Lotus japonicus HOM05D008220 ORTHO05D010358 3.6e-06 56.2 80 32.5
Sc09g0002060 Simmondsia chinensis HOM05D009348 ORTHO05D010856 3.6e-06 56.2 82 34.1
Sc02g0003510 Simmondsia chinensis HOM05D009348 ORTHO05D010856 4.7e-06 55.8 80 33.8
Actinidia23250 Actinidia chinensis HOM05D012898 ORTHO05D009356 6.2e-06 55.5 106 30.2
Rhsim02G0045800 Rhododendron simsii HOM05D008219 ORTHO05D009356 6.2e-06 55.5 81 34.6
Rhsim02G0133000 Rhododendron simsii HOM05D008219 ORTHO05D009356 6.2e-06 55.5 105 33.3
Sc21g0001740 Simmondsia chinensis HOM05D011136 ORTHO05D010856 6.2e-06 55.5 84 35.7
Sc01g0004870 Simmondsia chinensis HOM05D009209 ORTHO05D009629 8.1e-06 55.1 63 38.1
Sc16g0002560 Simmondsia chinensis HOM05D006933 ORTHO05D009629 8.1e-06 55.1 81 48.1
Sc16g0004820 Simmondsia chinensis HOM05D006933 ORTHO05D009629 8.1e-06 55.1 48 72.9


User provided reference genes

Program Settings