Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc06g0004220 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.1e-252 875.2 428 100.0
Sc18g0002450 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.8e-134 483.4 427 56.4
Sc07g0006510 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.7e-113 413.7 330 69.4
Sc16g0003440 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.5e-112 410.6 307 68.1
Sc24g0000790 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.6e-106 390.6 424 50.0
Sc10g0006330 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.6e-101 373.2 235 77.9
Sc19g0006300 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.1e-96 357.8 402 50.5
Sc01g0005690 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.3e-96 355.9 240 71.7
Sc17g0002170 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.1e-94 351.3 291 62.2
Sc26g0001380 Simmondsia chinensis HOM05D006933 ORTHO05D009629 8.4e-92 341.7 276 60.1
Sc18g0006260 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.3e-88 329.3 188 86.7
Sc12g0005710 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.3e-86 322.4 415 45.8
Sc13g0006150 Simmondsia chinensis HOM05D006933 ORTHO05D009629 6.9e-78 295.4 215 66.0
Sc25g0003910 Simmondsia chinensis HOM05D006933 ORTHO05D009629 6.4e-76 288.9 333 52.0
Sc08g0005340 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.6e-74 282.7 206 68.4
Sc10g0006470 Simmondsia chinensis HOM05D006933 ORTHO05D009629 8.4e-68 261.9 186 66.1
Sc20g0003570 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.6e-66 257.7 279 50.9
Sc03g0004560 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.8e-63 246.1 180 66.1
Sc11g0005090 Simmondsia chinensis HOM05D006933 ORTHO05D009629 9.0e-62 241.9 275 47.3
Sc20g0003680 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.9e-61 239.2 232 52.2
Sc12g0007420 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.0e-57 226.9 184 60.3
Sc12g0008540 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.3e-56 223.0 198 55.6
Sc20g0004170 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.7e-56 222.6 235 48.1
Sc13g0005400 Simmondsia chinensis HOM05D006933 ORTHO05D009629 9.1e-54 215.3 190 59.5
Sc19g0006270 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.0e-53 214.2 226 52.2
Sc08g0005990 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.4e-53 213.4 206 53.9
Sc21g0005420 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.9e-49 199.9 198 51.5
Sc23g0004170 Simmondsia chinensis HOM05D006933 ORTHO05D009629 9.7e-48 195.3 284 41.2
Sc26g0002220 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.7e-47 194.5 302 42.1
Sc17g0003640 Simmondsia chinensis HOM05D006933 ORTHO05D009629 9.1e-46 188.7 196 52.0
Sc07g0005650 Simmondsia chinensis HOM05D013278 ORTHO05D009629 1.2e-42 178.3 169 52.1
Sc02g0004050 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.7e-42 176.4 238 41.2
Sc23g0004060 Simmondsia chinensis HOM05D006933 ORTHO05D009629 8.8e-41 172.2 109 70.6
Sc26g0002540 Simmondsia chinensis HOM05D006933 ORTHO05D009629 8.8e-41 172.2 150 57.3
Sc10g0007390 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.1e-40 171.8 136 60.3
Sc06g0004410 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.3e-40 170.2 157 52.9
Sc09g0006400 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.7e-39 166.8 210 43.3
Sc11g0004570 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.0e-36 158.7 125 59.2
Sc23g0004070 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.2e-34 151.8 115 66.1
Sc18g0005060 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.0e-33 148.7 89 79.8
Sc01g0006920 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.4e-32 143.7 188 44.1
Sc06g0004260 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.4e-30 137.5 300 33.3
Sc04g0003720 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.7e-29 134.0 245 32.7
Sc16g0005360 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.3e-28 131.7 378 31.7
Sc03g0007270 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.6e-26 124.8 163 44.2
Sc10g0006460 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.7e-26 123.2 106 54.7
Sc23g0003820 Simmondsia chinensis HOM05D006933 ORTHO05D009629 8.0e-26 122.5 93 59.1
Sc05g0005650 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.8e-25 121.3 89 62.9
Sc09g0005800 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.0e-25 120.2 81 66.7
Sc26g0003190 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.0e-25 120.2 113 52.2
Sc03g0007280 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.2e-24 118.6 95 60.0
Sc16g0006020 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.2e-24 118.6 344 29.7
Sc20g0003530 Simmondsia chinensis HOM05D006933 ORTHO05D009629 8.3e-23 112.5 171 39.8
Sc09g0006390 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.9e-20 104.0 99 53.5
Sc20g0002870 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.0e-20 103.2 107 51.4
Sc04g0003670 Simmondsia chinensis HOM05D006933 ORTHO05D009629 9.5e-19 99.0 81 59.3
Sc18g0005120 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.8e-18 97.4 82 54.9
Sc04g0003750 Simmondsia chinensis HOM05D006933 ORTHO05D009629 6.8e-17 92.8 74 60.8
Lj3g0019996 Lotus japonicus HOM05D008220 ORTHO05D010358 3.4e-16 90.5 297 27.3
Ah.13g066110 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.2e-15 87.8 331 24.8
Sc13g0006290 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.2e-15 87.8 59 64.4
Sc06g0006000 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.9e-15 87.4 88 47.7
Sc11g0005100 Simmondsia chinensis HOM05D006933 ORTHO05D009629 6.3e-15 86.3 99 49.5
Actinidia12169 Actinidia chinensis HOM05D012898 ORTHO05D009356 8.3e-15 85.9 299 25.1
Sc11g0005990 Simmondsia chinensis HOM05D006933 ORTHO05D009629 8.3e-15 85.9 104 47.1
Sc23g0004620 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.4e-14 85.1 76 59.2
Sc02g0003510 Simmondsia chinensis HOM05D009348 ORTHO05D010856 1.8e-14 84.7 298 24.2
Ah.01g013230 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.4e-14 84.3 341 24.9
Sc12g0009480 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.7e-13 80.9 66 62.1
Ah.02g118210 Amaranthus hybridus HOM05D008762 ORTHO05D011252 3.5e-13 80.5 319 24.1
Sc22g0003620 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.5e-13 80.5 73 60.3
Sc01g0002780 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.6e-13 80.1 91 45.1
LjContig00583g0009142 Lotus japonicus HOM05D008220 ORTHO05D010358 1.0e-12 79.0 307 24.1
Sc12g0008830 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.3e-12 78.6 87 49.4
Sc09g0007560 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.3e-12 77.8 132 37.9
Lj1g0011765 Lotus japonicus HOM05D008220 ORTHO05D010358 3.9e-12 77.0 313 22.4
Lj5g0003699 Lotus japonicus HOM05D008220 ORTHO05D010358 8.6e-12 75.9 288 21.5
Sc02g0006620 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.3e-11 73.9 60 58.3
Sc21g0001740 Simmondsia chinensis HOM05D011136 ORTHO05D010856 3.3e-11 73.9 305 23.9
Lj3g0021978 Lotus japonicus HOM05D002777 ORTHO05D001516 7.3e-11 72.8 308 21.4
Lj6g0019563 Lotus japonicus HOM05D008220 ORTHO05D010358 7.3e-11 72.8 276 25.7
vmacro21928 Vaccinium macrocarpon HOM05D000086 ORTHO05D000431 3.6e-10 70.5 287 21.3
Rhsim13G0125400 Rhododendron simsii HOM05D008219 ORTHO05D009356 6.2e-10 69.7 359 21.2
Phvul.008G144313 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.3e-09 67.8 260 23.5
Lj1g0024049 Lotus japonicus HOM05D008220 ORTHO05D010358 3.1e-09 67.4 290 22.4
Lj4g0014288 Lotus japonicus HOM05D008220 ORTHO05D010358 4.0e-09 67.0 303 21.8
Sc12g0005980 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.0e-09 67.0 62 51.6
Lj3g0023441 Lotus japonicus HOM05D008220 ORTHO05D010358 5.2e-09 66.6 268 21.6
vmacro21908 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 6.8e-09 66.2 282 23.0
vmacro01896 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 8.9e-09 65.9 257 25.3
CSS0042161 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 1.2e-08 65.5 153 28.8
COL.COLO4_25415 Corchorus olitorius HOM05D009258 ORTHO05D009583 1.2e-08 65.5 293 21.8
Sc14g0002620 Simmondsia chinensis HOM05D009209 ORTHO05D011705 1.2e-08 65.5 235 23.4
Gohir.A10G205900 Gossypium hirsutum HOM05D000003 ORTHO05D000006 2.0e-08 64.7 321 20.2
COL.COLO4_27331 Corchorus olitorius HOM05D009258 ORTHO05D009583 2.6e-08 64.3 150 24.7
DCAR_024191 Daucus carota HOM05D004122 ORTHO05D004468 7.5e-08 62.8 303 23.1
vmacro21269 Vaccinium macrocarpon HOM05D005003 ORTHO05D006220 7.5e-08 62.8 199 20.1
Lj1g0010280 Lotus japonicus HOM05D008220 ORTHO05D010358 9.8e-08 62.4 280 23.2
Phvul.009G011500 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.3e-07 62.0 281 20.6
CSS0000615 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 1.7e-07 61.6 146 28.1
CSS0025340 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 1.7e-07 61.6 146 28.1
Medtr2g103400 Medicago truncatula HOM05D002777 ORTHO05D001516 1.7e-07 61.6 294 21.8
Rhsim05G0113800 Rhododendron simsii HOM05D010265 ORTHO05D009356 1.7e-07 61.6 181 28.7
Actinidia34556 Actinidia chinensis HOM05D008219 ORTHO05D009356 2.2e-07 61.2 350 20.3
Lj4g0023448 Lotus japonicus HOM05D002777 ORTHO05D001516 2.9e-07 60.8 182 25.8
Phvul.008G101400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 3.7e-07 60.5 274 21.2
CSS0024781 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 4.9e-07 60.1 265 24.2
DCAR_004018 Daucus carota HOM05D004122 ORTHO05D004468 4.9e-07 60.1 284 22.5
MBI16_g20730_MAGBIO Magnolia biondii HOM05D000910 ORTHO05D000852 6.4e-07 59.7 223 24.2
Sc10g0009390 Simmondsia chinensis HOM05D011136 ORTHO05D010856 6.4e-07 59.7 179 23.5
Sc03g0004550 Simmondsia chinensis HOM05D009209 ORTHO05D011705 8.3e-07 59.3 89 29.2
DCAR_007691 Daucus carota HOM05D004122 ORTHO05D004468 1.1e-06 58.9 254 22.8
Lj2g0019090 Lotus japonicus HOM05D008220 ORTHO05D010358 1.4e-06 58.5 281 23.5
Ah.07g196620 Amaranthus hybridus HOM05D008762 ORTHO05D031041 1.9e-06 58.2 137 27.7
Phvul.L001950 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.4e-06 57.8 262 21.4
Sc11g0007570 Simmondsia chinensis HOM05D000027 ORTHO05D000500 2.4e-06 57.8 77 39.0
Lj2g0005575 Lotus japonicus HOM05D002777 ORTHO05D001516 3.2e-06 57.4 315 22.5
Lj3g0010325 Lotus japonicus HOM05D008220 ORTHO05D010358 3.2e-06 57.4 312 21.8
Sc15g0003580 Simmondsia chinensis HOM05D009209 ORTHO05D011705 3.2e-06 57.4 89 28.1
Actinidia26692 Actinidia chinensis HOM05D008219 ORTHO05D009356 4.1e-06 57.0 231 26.4
CSS0004424 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 4.1e-06 57.0 114 28.9
Lj1g0017334 Lotus japonicus HOM05D008220 ORTHO05D010358 4.1e-06 57.0 280 21.8
Rhsim11G0150800 Rhododendron simsii HOM05D012808 ORTHO05D009356 4.1e-06 57.0 69 31.9
Sc19g0004470 Simmondsia chinensis HOM05D011136 ORTHO05D010856 5.4e-06 56.6 88 38.6
Ah.10g026690 Amaranthus hybridus HOM05D008762 ORTHO05D011252 7.0e-06 56.2 113 26.5
DCAR_028573 Daucus carota HOM05D004122 ORTHO05D004468 7.0e-06 56.2 144 25.0
Lj5g0019505 Lotus japonicus HOM05D002777 ORTHO05D001516 7.0e-06 56.2 142 25.4
COL.COLO4_03775 Corchorus olitorius HOM05D009258 ORTHO05D009583 9.2e-06 55.8 106 28.3
Duzib170G0053 Durio zibethinus HOM05D037386 ORTHO05D035091 9.2e-06 55.8 182 25.8
Lsat_1_v5_gn_2_125141 Lactuca sativa HOM05D008939 ORTHO05D001516 9.2e-06 55.8 121 25.6
Medtr5g065250 Medicago truncatula HOM05D002777 ORTHO05D001516 9.2e-06 55.8 308 21.4
Rhsim07G0230400 Rhododendron simsii HOM05D008219 ORTHO05D009356 9.2e-06 55.8 335 24.2
Sc03g0004450 Simmondsia chinensis HOM05D009209 ORTHO05D011705 9.2e-06 55.8 133 22.6
vmacro12106 Vaccinium macrocarpon HOM05D000081 ORTHO05D009356 9.2e-06 55.8 134 27.6


User provided reference genes

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