Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc06g0003370 Simmondsia chinensis HOM05D006048 ORTHO05D007642 0.0e+00 1772.7 903 100.0
Hund07062 Selenicereus undatus HOM05D006048 ORTHO05D007642 1.7e-139 501.1 951 36.2
AUR62000837 Chenopodium quinoa HOM05D006048 ORTHO05D007642 6.4e-134 482.6 580 46.4
Ah.06g189270 Amaranthus hybridus HOM05D006048 ORTHO05D007642 5.1e-131 473.0 935 37.0
AUR62005136 Chenopodium quinoa HOM05D006048 ORTHO05D007642 8.7e-131 472.2 590 44.1
Haze_04204 Corylus avellana HOM05D006048 ORTHO05D007642 5.6e-130 469.5 1039 34.4
Cfa006579 Carpinus fangiana HOM05D006048 ORTHO05D007642 5.3e-128 463.0 1041 34.8
CSS0040601 Camellia sinensis var. sinensis HOM05D006048 ORTHO05D007642 3.4e-127 460.3 665 44.4
Actinidia05707 Actinidia chinensis HOM05D006048 ORTHO05D007642 3.3e-122 443.7 968 35.4
QL03p006882 Quercus lobata HOM05D006048 ORTHO05D007642 3.7e-121 440.3 1019 33.0
EL10Ac4g09343 Beta vulgaris HOM05D006048 ORTHO05D007642 3.4e-119 433.7 994 33.4
Actinidia23630 Actinidia chinensis HOM05D006048 ORTHO05D007642 4.5e-119 433.3 988 34.3
TAR636G0181 Trochodendron aralioides HOM05D006048 ORTHO05D007642 2.7e-116 424.1 924 35.0
GSVIVG01000040001 Vitis vinifera HOM05D006048 ORTHO05D007642 3.3e-114 417.2 559 44.9
Potri.005G034100 Populus trichocarpa HOM05D006048 ORTHO05D007642 1.3e-110 405.2 1005 32.3
Rhsim07G0182400 Rhododendron simsii HOM05D006048 ORTHO05D007642 1.0e-107 395.6 836 36.4
TWI12G1173 Tripterygium wilfordii HOM05D006048 ORTHO05D007642 3.7e-105 387.1 1030 31.4
TWI56G0330 Tripterygium wilfordii HOM05D006048 ORTHO05D007642 8.2e-105 386.0 1070 30.8
Ciclev10000202m.g Citrus clementina HOM05D006048 ORTHO05D007642 4.5e-103 380.2 981 32.6
Hma1.2p1_0928F.1_g237870 Hydrangea macrophylla HOM05D006048 ORTHO05D007642 1.0e-102 379.0 936 32.4
Sabra05G0036000 Salix brachista HOM05D006048 ORTHO05D007642 2.9e-102 377.5 1014 32.2
Glyma.10G155100 Glycine max HOM05D006048 ORTHO05D007642 8.5e-102 375.9 982 31.9
Sabra13G0025400 Salix brachista HOM05D006048 ORTHO05D007642 1.1e-101 375.6 1028 30.9
Potri.013G023600 Populus trichocarpa HOM05D006048 ORTHO05D007642 1.4e-99 368.6 1030 31.7
Lalb_Chr21g0310721 Lupinus albus HOM05D006048 ORTHO05D007642 1.1e-98 365.5 980 31.3
Oeu017488.1 Olea europaea HOM05D006048 ORTHO05D007642 1.5e-98 365.2 583 39.1
Manes.09G166100 Manihot esculenta HOM05D006048 ORTHO05D007642 7.4e-98 362.8 1002 29.5
Ca_10107_v3 Cicer arietinum L. HOM05D006048 ORTHO05D007642 1.7e-97 361.7 983 30.6
Nitab4.5_0005388g0020 Nicotiana tabacum HOM05D006048 ORTHO05D007642 2.2e-97 361.3 993 31.4
Duzib128G0698 Durio zibethinus HOM05D006048 ORTHO05D007642 2.8e-97 360.9 993 31.5
Glyma.20G233200 Glycine max HOM05D006048 ORTHO05D007642 1.4e-96 358.6 978 31.9
Nn4g26237 Nelumbo nucifera HOM05D006048 ORTHO05D007642 1.8e-96 358.2 771 34.2
Thecc.05G304700 Theobroma cacao HOM05D006048 ORTHO05D007642 6.9e-96 356.3 970 32.6
TPR.G6104 Trifolium pratense HOM05D006048 ORTHO05D007642 3.4e-95 354.0 987 30.9
Prupe.6G327100 Prunus persica HOM05D006048 ORTHO05D007642 4.5e-95 353.6 1081 30.5
Sopen01g042410 Solanum pennellii HOM05D006048 ORTHO05D007642 7.7e-95 352.8 1107 30.3
Dinv23949 Davidia involucrata HOM05D006048 ORTHO05D007642 3.8e-94 350.5 599 38.7
RcHm_v2.0_Chr3g0454571 Rosa chinensis HOM05D006048 ORTHO05D007642 1.1e-93 349.0 894 33.6
COL.COLO4_13482 Corchorus olitorius HOM05D006048 ORTHO05D007642 5.5e-93 346.7 459 44.0
MD12G1220300 Malus domestica HOM05D006048 ORTHO05D007642 2.1e-92 344.7 793 35.1
Gohir.A11G264200 Gossypium hirsutum HOM05D006048 ORTHO05D007642 7.9e-92 342.8 921 33.0
Cc02_g33600 Coffea canephora HOM05D006048 ORTHO05D007642 1.0e-91 342.4 843 33.2
Medtr1g082840 Medicago truncatula HOM05D006048 ORTHO05D007642 1.0e-91 342.4 991 30.1
Nitab4.5_0008677g0020 Nicotiana tabacum HOM05D006048 ORTHO05D007642 1.4e-91 342.0 1079 30.6
Gohir.D11G274400 Gossypium hirsutum HOM05D006048 ORTHO05D007642 1.8e-91 341.7 900 33.1
Phvul.007G180600 Phaseolus vulgaris HOM05D006048 ORTHO05D007642 3.0e-91 340.9 956 30.3
FvH4_6g05680 Fragaria vesca HOM05D006048 ORTHO05D007642 6.7e-91 339.7 885 32.3
Gorai.007G296200 Gossypium raimondii HOM05D006048 ORTHO05D007642 2.0e-90 338.2 906 33.3
CsaV3_2G005180 Cucumis sativus L. HOM05D006048 ORTHO05D007642 2.6e-90 337.8 1007 32.2
CAN.G1077.18 Capsicum annuum HOM05D006048 ORTHO05D007642 3.3e-90 337.4 1059 29.9
Lj5g0003009 Lotus japonicus HOM05D006048 ORTHO05D007642 4.4e-90 337.0 969 30.8
ECA238G0871 Erigeron canadensis HOM05D006048 ORTHO05D007642 7.4e-90 336.3 916 31.6
MD04G1206500 Malus domestica HOM05D006048 ORTHO05D007642 7.4e-90 336.3 772 34.7
PGSC0003DMG401028588 Solanum tuberosum HOM05D006048 ORTHO05D007642 9.7e-90 335.9 1080 30.8
FAN14G2991 Fragaria x ananassa HOM05D006048 ORTHO05D007642 1.3e-89 335.5 903 32.1
FAN14G2795 Fragaria x ananassa HOM05D006048 ORTHO05D007642 3.7e-89 334.0 906 32.3
SalBow8G1366 Salvia bowleyana HOM05D006048 ORTHO05D007642 6.3e-89 333.2 951 31.8
Peaxi162Scf00037g00236 Petunia axillaris HOM05D006048 ORTHO05D007642 2.4e-88 331.3 1035 31.0
MSTRG.20430 Avicennia marina HOM05D006048 ORTHO05D007642 7.0e-88 329.7 584 37.3
FAN02G2040 Fragaria x ananassa HOM05D006048 ORTHO05D007642 2.0e-87 328.2 883 31.8
Nn1g02208 Nelumbo nucifera HOM05D006048 ORTHO05D007642 4.5e-87 327.0 992 30.6
Solyc01g098870.3 Solanum lycopersicum HOM05D006048 ORTHO05D007642 5.9e-87 326.6 885 31.4
Aqoxy2G03311 Aquilegia oxysepala HOM05D006048 ORTHO05D007642 2.2e-86 324.7 671 35.5
Migut.B01039 Erythranthe guttata HOM05D006048 ORTHO05D007642 6.5e-86 323.2 943 30.2
HanXRQChr15g0463081 Helianthus annuus HOM05D006048 ORTHO05D007642 8.5e-86 322.8 941 30.6
ClCG02G015880 Citrullus lanatus HOM05D006048 ORTHO05D007642 1.1e-85 322.4 1005 30.9
Lalb_Chr06g0167761 Lupinus albus HOM05D006048 ORTHO05D007642 4.2e-85 320.5 937 30.7
VMungo0720G0675 Vigna mungo HOM05D006048 ORTHO05D007642 2.7e-84 317.8 978 29.1
FAN05G1530 Fragaria x ananassa HOM05D006048 ORTHO05D007642 1.8e-83 315.1 1011 30.1
MELO3C004275.2 Cucumis melo HOM05D006048 ORTHO05D007642 3.3e-82 310.8 997 31.2
FAN09G2502 Fragaria x ananassa HOM05D006048 ORTHO05D007642 2.8e-81 307.8 1020 29.2
Eucgr.H04481 Eucalyptus grandis HOM05D006048 ORTHO05D007642 2.4e-80 304.7 986 29.0
Sed0020620 Sechium edule HOM05D006048 ORTHO05D007642 1.2e-79 302.4 973 29.8
Cpa.g.sc48.39 Carica papaya HOM05D006048 ORTHO05D007642 1.6e-79 302.0 945 29.6
MBI19_g16658_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 5.9e-79 300.1 507 36.3
PGR031G0290 Punica granatum HOM05D006048 ORTHO05D007642 8.5e-78 296.2 1048 29.3
FAN05G2734 Fragaria x ananassa HOM05D006048 ORTHO05D007642 1.2e-76 292.4 866 31.1
SGA_v2.0_scaffold172G38965 Striga asiatica HOM05D006048 ORTHO05D007642 1.6e-76 292.0 693 32.3
Psat6g149640 Pisum sativum HOM05D006048 ORTHO05D007642 6.8e-75 286.6 949 28.7
THA.LOC104820894 Tarenaya hassleriana HOM05D006048 ORTHO05D007642 9.1e-72 276.2 990 29.6
vmacro05021 Vaccinium macrocarpon HOM05D006048 ORTHO05D007642 3.5e-71 274.2 1065 28.5
THA.LOC104805873 Tarenaya hassleriana HOM05D006048 ORTHO05D007642 4.5e-71 273.9 953 28.4
PSO170G0056 Papaver somniferum HOM05D006048 ORTHO05D007642 3.4e-66 257.7 394 37.6
PSO302G0271 Papaver somniferum HOM05D006048 ORTHO05D007642 1.1e-64 252.7 393 35.4
Aa31LG2G11800 Aethionema arabicum HOM05D006048 ORTHO05D007642 1.8e-64 251.9 978 28.1
Lsat_1_v5_gn_2_64861 Lactuca sativa HOM05D006048 ORTHO05D007642 1.5e-61 242.3 994 27.7
Carub.0002s0845 Capsella rubella HOM05D006048 ORTHO05D007642 3.3e-61 241.1 697 30.0
A09p19290 Brassica napus HOM05D006048 ORTHO05D007642 7.2e-61 240.0 526 32.1
CARHR284550 Cardamine hirsuta HOM05D006048 ORTHO05D007642 1.6e-60 238.8 538 32.9
BcaC04g22032 Brassica carinata HOM05D006048 ORTHO05D007642 3.6e-60 237.7 620 30.0
C09p24290 Brassica napus HOM05D006048 ORTHO05D007642 2.3e-59 235.0 620 30.0
BolC9t55346H Brassica oleracea HOM05D006048 ORTHO05D007642 9.8e-58 229.6 630 29.7
AL1G65400 Arabidopsis lyrata HOM05D006048 ORTHO05D007642 3.7e-57 227.6 945 26.7
ATR0626G180 Amborella trichopoda HOM05D006048 ORTHO05D007642 1.1e-56 226.1 367 36.2
BcaB07g31106 Brassica carinata HOM05D006048 ORTHO05D007642 2.4e-56 224.9 951 26.1
BraA09t37546Z Brassica rapa HOM05D006048 ORTHO05D007642 2.0e-55 221.9 790 27.0
AT1G54920 Arabidopsis thaliana HOM05D006048 ORTHO05D007642 5.9e-55 220.3 932 26.9
CDE05G2441 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 8.0e-52 209.9 369 35.0
SEGI_14627 Sequoiadendron giganteum HOM05D006048 ORTHO05D007642 2.9e-49 201.4 548 29.9
Os11g0148400 Oryza sativa ssp. japonica HOM05D006048 ORTHO05D007642 6.4e-49 200.3 327 34.6
CiPaw.07G016800 Carya illinoinensis HOM05D006048 ORTHO05D007642 6.6e-46 190.3 821 27.9
Atru.chr2.428 Acer truncatum HOM05D006048 ORTHO05D007642 8.6e-46 189.9 182 48.9
Psat7g077840 Pisum sativum HOM05D006048 ORTHO05D007642 1.9e-37 162.2 177 44.6
HPP92_011281 Vanilla planifolia HOM05D006048 ORTHO05D007642 2.8e-36 158.3 383 30.0
HPP92_011303 Vanilla planifolia HOM05D006048 ORTHO05D007642 4.7e-36 157.5 379 30.3
Atru.chr2.429 Acer truncatum HOM05D006048 ORTHO05D007642 9.2e-32 143.3 223 39.5
Manes.08G121600 Manihot esculenta HOM05D006048 ORTHO05D007642 3.9e-30 137.9 667 26.4
CDE05G0200 Ceratophyllum demersum HOM05D006048 ORTHO05D007642 1.1e-29 136.3 235 34.0
Mapoly0011s0030 Marchantia polymorpha HOM05D006048 ORTHO05D007642 1.9e-29 135.6 254 30.3
Lj9A29T9 Lonicera japonica HOM05D006048 ORTHO05D007642 8.1e-28 130.2 293 35.8
AagrBONN_evm.TU.Sc2ySwM_344.3982 Anthoceros agrestis HOM05D006048 ORTHO05D007642 6.8e-27 127.1 255 31.8
Lj9A18T10 Lonicera japonica HOM05D006048 ORTHO05D007642 5.8e-26 124.0 365 32.3
MBI19_g40207_MAGBIO Magnolia biondii HOM05D006048 ORTHO05D007642 1.7e-22 112.5 269 29.7
SMO203G0156 Selaginella moellendorffii HOM05D006048 ORTHO05D007642 1.3e-14 86.3 186 29.6
CiPaw.08G165500 Carya illinoinensis HOM05D006048 ORTHO05D007642 7.4e-13 80.5 89 39.3
Actinidia01443 Actinidia chinensis HOM05D006048 ORTHO05D007642 9.0e-11 73.6 97 42.3
CiPaw.08G165600 Carya illinoinensis HOM05D006048 ORTHO05D007642 3.9e-06 58.2 555 26.1


User provided reference genes

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