Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc06g0003310 Simmondsia chinensis HOM05D006315 ORTHO05D008052 7.1e-201 703.7 362 100.0
AUR62000828 Chenopodium quinoa HOM05D006315 ORTHO05D008052 5.6e-129 464.9 358 69.8
Nn6g32180 Nelumbo nucifera HOM05D006315 ORTHO05D008052 2.1e-128 463.0 353 70.0
Manes.09G167100 Manihot esculenta HOM05D006315 ORTHO05D008052 2.3e-127 459.5 352 71.3
Actinidia05703 Actinidia chinensis HOM05D006315 ORTHO05D008052 1.5e-126 456.8 302 77.5
RhsimUnG0225800 Rhododendron simsii HOM05D006315 ORTHO05D008052 5.7e-126 454.9 313 74.8
GSVIVG01000051001 Vitis vinifera HOM05D006315 ORTHO05D008052 1.3e-125 453.8 339 72.9
CSS0039769 Camellia sinensis var. sinensis HOM05D006315 ORTHO05D008052 2.9e-125 452.6 361 67.9
AUR62005146 Chenopodium quinoa HOM05D006315 ORTHO05D008052 6.4e-125 451.4 393 64.1
Prupe.6G325900 Prunus persica HOM05D006315 ORTHO05D008052 1.4e-124 450.3 354 69.2
Eucgr.B01969 Eucalyptus grandis HOM05D006315 ORTHO05D008052 2.4e-124 449.5 356 69.7
Dinv40287 Davidia involucrata HOM05D006315 ORTHO05D008052 5.4e-124 448.4 304 75.3
PGR083G2010 Punica granatum HOM05D006315 ORTHO05D008052 5.4e-124 448.4 362 67.4
TAR381G0108 Trochodendron aralioides HOM05D006315 ORTHO05D008052 5.4e-124 448.4 311 73.6
Ah.06g189370 Amaranthus hybridus HOM05D006315 ORTHO05D008052 7.0e-124 448.0 345 69.6
Thecc.05G303200 Theobroma cacao HOM05D006315 ORTHO05D008052 9.2e-124 447.6 340 69.7
COL.COLO4_13471 Corchorus olitorius HOM05D006315 ORTHO05D008052 2.7e-123 446.0 296 76.4
QL03p006996 Quercus lobata HOM05D006315 ORTHO05D008052 2.7e-123 446.0 356 66.9
Potri.013G020800 Populus trichocarpa HOM05D006315 ORTHO05D008052 3.5e-123 445.7 333 70.6
Cfa006589 Carpinus fangiana HOM05D006315 ORTHO05D008052 1.7e-122 443.4 356 68.3
MD12G1219300 Malus domestica HOM05D006315 ORTHO05D008052 1.7e-122 443.4 357 68.3
Ciclev10001688m.g Citrus clementina HOM05D006315 ORTHO05D008052 2.3e-122 443.0 354 67.8
Aqoxy6G00442 Aquilegia oxysepala HOM05D006315 ORTHO05D008052 3.0e-122 442.6 360 66.1
FAN02G1008 Fragaria x ananassa HOM05D006315 ORTHO05D008052 1.1e-121 440.7 352 67.0
Gohir.D11G275200 Gossypium hirsutum HOM05D006315 ORTHO05D008052 1.1e-121 440.7 355 65.6
Gorai.007G297000 Gossypium raimondii HOM05D006315 ORTHO05D008052 1.1e-121 440.7 355 65.6
RcHm_v2.0_Chr3g0454751 Rosa chinensis HOM05D006315 ORTHO05D008052 1.1e-121 440.7 352 66.5
Hund07070 Selenicereus undatus HOM05D006315 ORTHO05D008052 4.3e-121 438.7 353 68.3
Cpa.g.sc48.53 Carica papaya HOM05D006315 ORTHO05D008052 5.6e-121 438.3 358 67.6
CiPaw.07G017800 Carya illinoinensis HOM05D006315 ORTHO05D008052 5.6e-121 438.3 352 68.2
Cc02_g33440 Coffea canephora HOM05D006315 ORTHO05D008052 9.5e-121 437.6 357 67.5
Oeu020852.1 Olea europaea HOM05D006315 ORTHO05D008052 1.6e-120 436.8 351 68.1
Duzib128G1131 Durio zibethinus HOM05D006315 ORTHO05D008052 2.8e-120 436.0 340 67.4
Sabra13G0023200 Salix brachista HOM05D006315 ORTHO05D008052 6.2e-120 434.9 357 65.3
vmacro05019 Vaccinium macrocarpon HOM05D006315 ORTHO05D008052 1.0e-119 434.1 254 83.1
Nitab4.5_0004395g0040 Nicotiana tabacum HOM05D006315 ORTHO05D008052 2.3e-119 433.0 357 67.5
TWI36G1375 Tripterygium wilfordii HOM05D006315 ORTHO05D008052 4.0e-119 432.2 343 67.3
FvH4_6g05840 Fragaria vesca HOM05D006315 ORTHO05D008052 5.2e-119 431.8 363 65.0
FAN09G2245 Fragaria x ananassa HOM05D006315 ORTHO05D008052 5.2e-119 431.8 353 66.6
Sopen01g042560 Solanum pennellii HOM05D006315 ORTHO05D008052 5.2e-119 431.8 300 72.7
THA.LOC104818698 Tarenaya hassleriana HOM05D006315 ORTHO05D008052 5.2e-119 431.8 355 67.3
arahy.Tifrunner.gnm1.ann1.9IE074 Arachis hypogaea HOM05D006315 ORTHO05D008052 1.2e-118 430.6 351 66.4
PGSC0003DMG400018995 Solanum tuberosum HOM05D006315 ORTHO05D008052 1.5e-118 430.3 352 65.1
FAN05G4943 Fragaria x ananassa HOM05D006315 ORTHO05D008052 3.4e-118 429.1 352 66.5
CAN.G1034.11 Capsicum annuum HOM05D006315 ORTHO05D008052 5.8e-118 428.3 353 64.6
ClCG02G015800 Citrullus lanatus HOM05D006315 ORTHO05D008052 9.8e-118 427.6 343 66.2
Peaxi162Scf00037g00325 Petunia axillaris HOM05D006315 ORTHO05D008052 2.9e-117 426.0 346 66.2
Lsat_1_v5_gn_9_86000 Lactuca sativa HOM05D006315 ORTHO05D008052 3.7e-117 425.6 353 64.9
FAN14G1304 Fragaria x ananassa HOM05D006315 ORTHO05D008052 6.4e-117 424.9 370 63.8
Aa31LG11G9300 Aethionema arabicum HOM05D006315 ORTHO05D008052 1.1e-116 424.1 342 66.4
FAN14G3373 Fragaria x ananassa HOM05D006315 ORTHO05D008052 2.4e-116 422.9 360 65.6
Thhalv10004542m.g Eutrema salsugineum HOM05D006315 ORTHO05D008052 3.2e-116 422.5 299 70.6
CsaV3_2G005300 Cucumis sativus L. HOM05D006315 ORTHO05D008052 5.4e-116 421.8 340 65.6
Carub.0006s2500 Capsella rubella HOM05D006315 ORTHO05D008052 7.0e-116 421.4 295 71.5
ECA236G1566 Erigeron canadensis HOM05D006315 ORTHO05D008052 7.0e-116 421.4 262 77.1
Sp2g20750 Schrenkiella parvula HOM05D006315 ORTHO05D008052 7.0e-116 421.4 300 70.7
Lalb_Chr02g0148251 Lupinus albus HOM05D006315 ORTHO05D008052 1.2e-115 420.6 325 67.1
AL6G39450 Arabidopsis lyrata HOM05D006315 ORTHO05D008052 3.5e-115 419.1 296 70.9
CARHR186120 Cardamine hirsuta HOM05D006315 ORTHO05D008052 3.5e-115 419.1 296 71.3
PSO675G8687 Papaver somniferum HOM05D006315 ORTHO05D008052 1.3e-114 417.2 338 66.3
MBI01_g44539_MAGBIO Magnolia biondii HOM05D006315 ORTHO05D008052 1.7e-114 416.8 253 81.8
HanXRQChr02g0046151 Helianthus annuus HOM05D006315 ORTHO05D008052 8.6e-114 414.5 294 69.7
C09p05830 Brassica napus HOM05D006315 ORTHO05D008052 1.1e-113 414.1 343 63.8
BolC9t53510H Brassica oleracea HOM05D006315 ORTHO05D008052 1.1e-113 414.1 343 63.8
FAN05G5779 Fragaria x ananassa HOM05D006315 ORTHO05D008052 2.5e-113 412.9 372 62.4
A09p05350 Brassica napus HOM05D006315 ORTHO05D008052 3.3e-113 412.5 343 64.4
BraA09t36173Z Brassica rapa HOM05D006315 ORTHO05D008052 3.3e-113 412.5 343 64.4
ATR1120G073 Amborella trichopoda HOM05D006315 ORTHO05D008052 1.6e-112 410.2 258 78.7
DCAR_022164 Daucus carota HOM05D006315 ORTHO05D008052 2.1e-112 409.8 299 68.6
SalBow8G0023 Salvia bowleyana HOM05D006315 ORTHO05D008052 1.8e-111 406.8 359 62.1
AT5G27560 Arabidopsis thaliana HOM05D006315 ORTHO05D008052 5.2e-111 405.2 297 68.4
MSTRG.16964 Avicennia marina HOM05D006315 ORTHO05D008052 2.0e-110 403.3 352 62.5
Ca_10111_v3 Cicer arietinum L. HOM05D006315 ORTHO05D008052 2.0e-110 403.3 296 69.3
Migut.B01035 Erythranthe guttata HOM05D006315 ORTHO05D008052 2.6e-110 402.9 332 65.4
CDE06G2073 Ceratophyllum demersum HOM05D006315 ORTHO05D008052 3.4e-110 402.5 352 61.4
Phvul.007G180000 Phaseolus vulgaris HOM05D006315 ORTHO05D008052 5.8e-110 401.7 332 64.5
VMungo0720G2927 Vigna mungo HOM05D006315 ORTHO05D008052 1.3e-109 400.6 336 64.0
Glyma.20G234000 Glycine max HOM05D006315 ORTHO05D008052 2.9e-109 399.4 300 69.0
Glyma.10G154300 Glycine max HOM05D006315 ORTHO05D008052 3.7e-109 399.1 300 68.0
TPR.G6112 Trifolium pratense HOM05D006315 ORTHO05D008052 3.7e-109 399.1 332 64.2
unitig_37.g12631 Utricularia gibba HOM05D006315 ORTHO05D008052 1.9e-108 396.7 294 69.7
MELO3C004257.2 Cucumis melo HOM05D006315 ORTHO05D008052 7.1e-108 394.8 306 67.0
PSO541G4223 Papaver somniferum HOM05D006315 ORTHO05D008052 9.2e-108 394.4 326 66.6
Psat6g151200 Pisum sativum HOM05D006315 ORTHO05D008052 2.7e-107 392.9 341 62.2
Lj5g0002172 Lotus japonicus HOM05D006315 ORTHO05D008052 4.6e-107 392.1 330 61.5
Medtr1g082900 Medicago truncatula HOM05D006315 ORTHO05D008052 7.8e-107 391.3 324 64.2
Sed0013855 Sechium edule HOM05D006315 ORTHO05D008052 2.3e-106 389.8 302 66.9
Gohir.A11G265000 Gossypium hirsutum HOM05D006315 ORTHO05D008052 2.5e-105 386.3 229 80.3
SGA_v2.0_scaffold13G06358 Striga asiatica HOM05D006315 ORTHO05D008052 2.1e-104 383.3 276 72.5
Solyc01g098990.4 Solanum lycopersicum HOM05D006315 ORTHO05D008052 7.6e-102 374.8 300 65.3
Atru.chr2.406 Acer truncatum HOM05D006315 ORTHO05D008052 3.3e-97 359.4 359 58.2
EL10Ac4g09351 Beta vulgaris HOM05D006315 ORTHO05D008052 1.8e-95 353.6 310 64.8
Haze_04196 Corylus avellana HOM05D006315 ORTHO05D008052 6.9e-95 351.7 302 64.2
SEGI_29864 Sequoiadendron giganteum HOM05D006315 ORTHO05D008052 9.3e-92 341.3 337 53.4
arahy.Tifrunner.gnm1.ann1.SMKB8G Arachis hypogaea HOM05D006315 ORTHO05D008052 9.0e-87 324.7 358 55.0
AagrBONN_evm.TU.Sc2ySwM_368.1535 Anthoceros agrestis HOM05D006315 ORTHO05D008052 2.9e-77 293.1 265 55.8
Zm00001eb377150 Zea mays HOM05D006315 ORTHO05D008052 1.2e-75 287.7 367 46.3
Lj5A533G15 Lonicera japonica HOM05D006315 ORTHO05D008052 3.5e-75 286.2 163 83.4
Mapoly0046s0092 Marchantia polymorpha HOM05D006315 ORTHO05D008052 1.9e-73 280.4 319 48.3
Nitab4.5_0000137g0320 Nicotiana tabacum HOM05D006315 ORTHO05D008052 3.7e-72 276.2 173 77.5
Eucgr.B01970 Eucalyptus grandis HOM05D006315 ORTHO05D008052 5.1e-66 255.8 187 67.9
Pp3c1_23410 Physcomitrium patens HOM05D006315 ORTHO05D008052 3.7e-64 249.6 360 42.2
Eucgr.B01875 Eucalyptus grandis HOM05D006315 ORTHO05D008052 1.9e-60 237.3 144 79.2
SMO116G0320 Selaginella moellendorffii HOM05D006315 ORTHO05D008052 9.3e-60 235.0 224 48.7
Actinidia23634 Actinidia chinensis HOM05D006315 ORTHO05D008052 7.7e-54 215.3 132 81.8
Lj5C470G0 Lonicera japonica HOM05D006315 ORTHO05D008052 1.9e-52 210.7 126 80.2
Lj5C532G5 Lonicera japonica HOM05D006315 ORTHO05D008052 1.9e-52 210.7 126 80.2
HPP92_002820 Vanilla planifolia HOM05D006315 ORTHO05D008052 2.7e-51 206.8 202 57.9
HPP92_002878 Vanilla planifolia HOM05D006315 ORTHO05D008052 8.8e-50 201.8 132 75.0
Cre17.g739550 Chlamydomonas reinhardtii HOM05D006315 ORTHO05D008052 1.9e-44 184.1 283 37.5
MCO15G525 Micromonas commoda HOM05D006315 ORTHO05D008052 7.0e-39 165.6 311 34.4
EL10As4g23462 Beta vulgaris HOM05D006315 ORTHO05D008052 4.4e-33 146.4 107 73.8
PRCOL_00006277 Prasinoderma coloniale HOM05D006315 ORTHO05D008052 1.3e-32 144.8 249 36.1
Hma1.2p1_0928F.1_g237790 Hydrangea macrophylla HOM05D006315 ORTHO05D008052 2.4e-31 140.6 111 68.5
Lj5P531T4 Lonicera japonica HOM05D006315 ORTHO05D008052 1.6e-22 111.3 83 67.5
Lj5A532G12 Lonicera japonica HOM05D006315 ORTHO05D008052 3.5e-22 110.2 201 39.8
Lj5P469T8 Lonicera japonica HOM05D006315 ORTHO05D008052 7.2e-20 102.4 53 88.7
Aa31LG11G9280 Aethionema arabicum HOM05D006315 ORTHO05D059511 1.6e-19 101.3 92 57.6
arahy.Tifrunner.gnm1.ann1.T3AGRQ Arachis hypogaea HOM05D006315 ORTHO05D008052 4.5e-14 83.2 61 62.3
Lj5A470G9 Lonicera japonica HOM05D006315 ORTHO05D008052 1.9e-12 77.8 129 41.1
Lj5A532G11 Lonicera japonica HOM05D006315 ORTHO05D008052 4.7e-11 73.2 129 39.5
EL10Ac4g09000 Beta vulgaris HOM05D006315 ORTHO05D008052 3.0e-10 70.5 38 84.2
BolC7t42010H Brassica oleracea HOM05D004896 ORTHO05D028223 8.9e-10 68.9 136 38.2
C09p41080 Brassica napus HOM05D004896 ORTHO05D028223 5.4e-07 59.7 39 71.8
BolC9t56987H Brassica oleracea HOM05D004896 ORTHO05D028223 5.4e-07 59.7 39 71.8
HPP92_002889 Vanilla planifolia HOM05D006315 ORTHO05D008052 5.4e-07 59.7 50 56.0


User provided reference genes

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