Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc06g0003070 Simmondsia chinensis HOM05D006811 ORTHO05D008419 1.2e-239 832.8 412 100.0
Hund22201 Selenicereus undatus HOM05D006811 ORTHO05D008419 1.3e-166 590.1 406 70.9
EL10Ac4g08932 Beta vulgaris HOM05D006811 ORTHO05D008419 1.3e-153 547.0 418 63.4
Dinv28246 Davidia involucrata HOM05D006811 ORTHO05D008419 2.2e-150 536.2 415 64.8
MD17G1286700 Malus domestica HOM05D006811 ORTHO05D008419 1.6e-148 530.0 413 63.7
Peaxi162Scf00713g00019 Petunia axillaris HOM05D006811 ORTHO05D008419 3.6e-148 528.9 399 64.2
TAR622G1242 Trochodendron aralioides HOM05D006811 ORTHO05D008419 7.9e-148 527.7 413 63.7
CSS0033706 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 1.8e-147 526.6 414 64.5
Rhsim10G0185300 Rhododendron simsii HOM05D006811 ORTHO05D008419 2.3e-147 526.2 409 62.8
Potri.017G139400 Populus trichocarpa HOM05D006811 ORTHO05D008419 5.1e-147 525.0 387 66.1
Sabra17G0117500 Salix brachista HOM05D006811 ORTHO05D008419 9.7e-146 520.8 398 65.1
Hma1.2p1_0158F.1_g069620 Hydrangea macrophylla HOM05D006811 ORTHO05D008419 1.7e-145 520.0 409 63.1
Gorai.008G054100 Gossypium raimondii HOM05D006811 ORTHO05D008419 2.2e-145 519.6 414 61.4
GSVIVG01035212001 Vitis vinifera HOM05D006811 ORTHO05D008419 4.8e-145 518.5 380 64.7
Nn4g24731 Nelumbo nucifera HOM05D006811 ORTHO05D008419 2.4e-144 516.2 384 63.5
Actinidia40414 Actinidia chinensis HOM05D006811 ORTHO05D008419 3.1e-144 515.8 386 64.2
Gohir.A12G052300 Gossypium hirsutum HOM05D006811 ORTHO05D008419 3.1e-144 515.8 414 60.9
Cfa007746 Carpinus fangiana HOM05D006811 ORTHO05D008419 1.2e-143 513.8 387 64.9
MSTRG.15636 Avicennia marina HOM05D006811 ORTHO05D008419 2.6e-143 512.7 399 60.9
Migut.K00747 Erythranthe guttata HOM05D006811 ORTHO05D008419 5.9e-143 511.5 378 62.7
PGSC0003DMG400016719 Solanum tuberosum HOM05D006811 ORTHO05D008419 1.0e-142 510.8 411 61.1
Sopen02g025910 Solanum pennellii HOM05D006811 ORTHO05D008419 1.7e-142 510.0 396 63.1
RcHm_v2.0_Chr3g0488721 Rosa chinensis HOM05D006811 ORTHO05D008419 2.5e-141 506.1 402 61.4
Aqoxy3G04154 Aquilegia oxysepala HOM05D006811 ORTHO05D008419 3.2e-141 505.8 420 60.5
CsaV3_4G000630 Cucumis sativus L. HOM05D006811 ORTHO05D008419 5.5e-141 505.0 381 62.7
FAN23G2849 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.6e-140 503.4 424 57.5
ClCG10G010680 Citrullus lanatus HOM05D006811 ORTHO05D008419 3.6e-140 502.3 383 62.4
Cc07_g12750 Coffea canephora HOM05D006811 ORTHO05D008419 6.1e-140 501.5 411 59.6
FvH4_1g27290 Fragaria vesca HOM05D006811 ORTHO05D008419 8.0e-140 501.1 397 61.0
Lalb_Chr15g0085211 Lupinus albus HOM05D006811 ORTHO05D008419 1.0e-139 500.7 407 60.0
Nitab4.5_0000483g0290 Nicotiana tabacum HOM05D006811 ORTHO05D008419 1.0e-139 500.7 382 63.6
DCAR_020444 Daucus carota HOM05D006811 ORTHO05D008419 1.4e-139 500.4 387 62.5
CiPaw.03G075800 Carya illinoinensis HOM05D006811 ORTHO05D008419 2.3e-139 499.6 373 64.6
Eucgr.F02911 Eucalyptus grandis HOM05D006811 ORTHO05D008419 8.8e-139 497.7 413 60.0
SalBow5G0387 Salvia bowleyana HOM05D006811 ORTHO05D008419 8.8e-139 497.7 384 62.5
arahy.Tifrunner.gnm1.ann1.A3RENN Arachis hypogaea HOM05D006811 ORTHO05D008419 2.6e-138 496.1 403 60.0
Lj6g0026577 Lotus japonicus HOM05D006811 ORTHO05D008419 4.4e-138 495.4 401 60.6
SalBow5G5201 Salvia bowleyana HOM05D006811 ORTHO05D008419 5.7e-138 495.0 384 62.0
AUR62003402 Chenopodium quinoa HOM05D006811 ORTHO05D008419 1.3e-137 493.8 430 59.1
CANSAT54G1721 Cannabis sativa HOM05D006811 ORTHO05D008419 2.8e-137 492.7 411 60.6
AUR62004775 Chenopodium quinoa HOM05D006811 ORTHO05D008419 4.8e-137 491.9 383 63.2
Thecc.04G060000 Theobroma cacao HOM05D006811 ORTHO05D008419 1.1e-136 490.7 406 60.8
Aa31LG2G2700 Aethionema arabicum HOM05D006811 ORTHO05D008419 1.8e-136 490.0 373 61.7
HanXRQChr14g0443391 Helianthus annuus HOM05D006811 ORTHO05D008419 4.1e-136 488.8 412 60.0
Lsat_1_v5_gn_2_71780 Lactuca sativa HOM05D006811 ORTHO05D008419 2.6e-135 486.1 410 59.3
Glyma.11G212500 Glycine max HOM05D006811 ORTHO05D008419 1.7e-134 483.4 401 59.6
Ca_17071_v3 Cicer arietinum L. HOM05D006811 ORTHO05D008419 2.9e-134 482.6 372 62.6
Glyma.18G043800 Glycine max HOM05D006811 ORTHO05D008419 2.9e-134 482.6 401 59.9
Nitab4.5_0008137g0060 Nicotiana tabacum HOM05D006811 ORTHO05D008419 1.1e-133 480.7 444 56.3
AT1G65900 Arabidopsis thaliana HOM05D006811 ORTHO05D008419 1.5e-133 480.3 379 62.3
AL2G23270 Arabidopsis lyrata HOM05D006811 ORTHO05D008419 2.5e-133 479.6 412 59.0
Ciclev10013413m.g Citrus clementina HOM05D006811 ORTHO05D008419 2.1e-132 476.5 397 60.5
TPR.G26689 Trifolium pratense HOM05D006811 ORTHO05D008419 4.7e-132 475.3 400 59.8
Carub.0002s1184 Capsella rubella HOM05D006811 ORTHO05D008419 6.1e-132 474.9 412 58.3
PGR004G2199 Punica granatum HOM05D006811 ORTHO05D008419 8.0e-132 474.6 421 58.7
Medtr3g064600 Medicago truncatula HOM05D006811 ORTHO05D008419 2.3e-131 473.0 400 59.8
Psat5g142440 Pisum sativum HOM05D006811 ORTHO05D008419 2.3e-131 473.0 399 60.2
VMungo0540G2025 Vigna mungo HOM05D006811 ORTHO05D008419 6.8e-131 471.5 378 59.8
CARHR057790 Cardamine hirsuta HOM05D006811 ORTHO05D008419 1.2e-130 470.7 389 59.9
Sp5g20950 Schrenkiella parvula HOM05D006811 ORTHO05D008419 1.5e-130 470.3 375 60.8
THA.LOC104825578 Tarenaya hassleriana HOM05D006811 ORTHO05D008419 2.0e-130 469.9 383 59.8
PSO063G4300 Papaver somniferum HOM05D006811 ORTHO05D008419 3.7e-129 465.7 388 58.2
Thhalv10018647m.g Eutrema salsugineum HOM05D006811 ORTHO05D008419 6.3e-129 464.9 400 58.5
TWI53G0648 Tripterygium wilfordii HOM05D006811 ORTHO05D008419 2.9e-126 456.1 338 65.1
HanXRQChr12g0365711 Helianthus annuus HOM05D006811 ORTHO05D008419 6.5e-126 454.9 412 56.1
BcaB03g15309 Brassica carinata HOM05D006811 ORTHO05D008419 4.2e-125 452.2 378 59.8
QL02p064229 Quercus lobata HOM05D006811 ORTHO05D008419 2.1e-124 449.9 457 52.5
CDE05G3344 Ceratophyllum demersum HOM05D006811 ORTHO05D008419 3.0e-123 446.0 381 56.4
unitig_0.g2638 Utricularia gibba HOM05D006811 ORTHO05D008419 5.2e-123 445.3 383 56.7
ATR0807G007 Amborella trichopoda HOM05D006811 ORTHO05D008419 2.6e-122 443.0 373 58.7
C06p39240 Brassica napus HOM05D006811 ORTHO05D008419 3.4e-122 442.6 400 56.8
A07p33010 Brassica napus HOM05D006811 ORTHO05D008419 7.5e-122 441.4 400 56.8
BraA07t30929Z Brassica rapa HOM05D006811 ORTHO05D008419 7.5e-122 441.4 400 56.8
BcaC08g46096 Brassica carinata HOM05D006811 ORTHO05D008419 1.7e-121 440.3 387 57.9
vmacro20465 Vaccinium macrocarpon HOM05D006811 ORTHO05D008419 5.4e-120 435.3 377 58.6
FAN26G0959 Fragaria x ananassa HOM05D006811 ORTHO05D008419 7.0e-120 434.9 412 53.2
Lj4A251G58 Lonicera japonica HOM05D006811 ORTHO05D008419 1.2e-119 434.1 447 51.2
Manes.02G081300 Manihot esculenta HOM05D006811 ORTHO05D008419 2.3e-118 429.9 298 67.1
Duzib138G1484 Durio zibethinus HOM05D006811 ORTHO05D008419 2.9e-118 429.5 410 54.4
BolC6t39018H Brassica oleracea HOM05D006811 ORTHO05D008419 6.6e-118 428.3 437 51.9
FAN28G2567 Fragaria x ananassa HOM05D006811 ORTHO05D008419 7.0e-112 408.3 295 64.1
Atru.chr1.2130 Acer truncatum HOM05D006811 ORTHO05D008419 3.0e-110 402.9 288 65.6
SGA_v2.0_scaffold115G32048 Striga asiatica HOM05D006811 ORTHO05D008419 1.2e-106 391.0 286 61.5
Sed0027023 Sechium edule HOM05D006811 ORTHO05D008419 2.2e-105 386.7 296 60.5
ECA238G0794 Erigeron canadensis HOM05D006811 ORTHO05D008419 9.2e-104 381.3 395 49.6
Phvul.006G087200 Phaseolus vulgaris HOM05D006811 ORTHO05D008419 3.9e-102 375.9 296 59.5
Ah.06g191630 Amaranthus hybridus HOM05D006811 ORTHO05D008419 1.2e-95 354.4 392 49.2
HPP92_014601 Vanilla planifolia HOM05D006811 ORTHO05D008419 8.1e-92 341.7 296 53.0
Prupe.3G014300 Prunus persica HOM05D006811 ORTHO05D008419 1.4e-88 330.9 231 66.7
Haze_14327 Corylus avellana HOM05D006811 ORTHO05D008419 8.6e-86 321.6 266 59.8
Gohir.D12G050800 Gossypium hirsutum HOM05D006811 ORTHO05D008419 1.6e-79 300.8 260 57.3
Zm00001eb001500 Zea mays HOM05D006811 ORTHO05D008419 6.6e-78 295.4 276 52.2
Cpa.g.sc178.33 Carica papaya HOM05D006811 ORTHO05D008419 2.8e-76 290.0 284 52.1
MELO3C017973.2 Cucumis melo HOM05D006811 ORTHO05D008419 1.4e-75 287.7 256 55.9
DCAR_017976 Daucus carota HOM05D006811 ORTHO05D008419 4.4e-74 282.7 215 60.9
AagrBONN_evm.TU.Sc2ySwM_368.3231 Anthoceros agrestis HOM05D006811 ORTHO05D008419 7.4e-61 238.8 380 37.6
PSO782G1785 Papaver somniferum HOM05D006811 ORTHO05D008419 1.8e-59 234.2 204 55.9
CSS0020523 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 1.6e-52 211.1 157 64.3
arahy.Tifrunner.gnm1.ann1.JYBV0C Arachis hypogaea HOM05D006811 ORTHO05D008419 1.2e-50 204.9 182 58.8
CSS0043986 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 3.4e-42 176.8 147 60.5
FAN19G2462 Fragaria x ananassa HOM05D006811 ORTHO05D008419 5.0e-41 172.9 159 52.8
CBR_g31433 Chara braunii HOM05D006811 ORTHO05D008419 1.1e-40 171.8 395 31.9
HPP92_014605 Vanilla planifolia HOM05D006811 ORTHO05D008419 1.1e-35 155.2 133 52.6
PRCOL_00004838 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 1.2e-26 125.2 378 29.6
Cre02.g081050 Chlamydomonas reinhardtii HOM05D006811 ORTHO05D008419 1.5e-24 118.2 393 27.7
FAN28G1678 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.9e-24 117.9 119 51.3
Medtr3g073800 Medicago truncatula HOM05D006811 ORTHO05D008419 1.2e-23 115.2 101 59.4
PRCOL_00005605 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 8.0e-23 112.5 359 27.3
Os03g0120000 Oryza sativa ssp. japonica HOM05D006811 ORTHO05D008419 5.2e-22 109.8 94 59.6
MCO05G199 Micromonas commoda HOM05D006811 ORTHO05D008419 2.7e-18 97.4 409 28.1
FAN28G2576 Fragaria x ananassa HOM05D006811 ORTHO05D008419 3.5e-18 97.1 68 60.3
Aa31LG2G2690 Aethionema arabicum HOM05D000356 ORTHO05D000265 4.2e-16 90.1 83 49.4
A02p12460 Brassica napus HOM05D006811 ORTHO05D008419 4.7e-15 86.7 77 53.2
COL.COLO4_03698 Corchorus olitorius HOM05D006811 ORTHO05D008419 4.1e-11 73.6 67 52.2
SEGI_18554 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 1.6e-10 71.6 73 45.2
SEGI_23786 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 7.7e-10 69.3 111 35.1
Oeu032292.1 Olea europaea HOM05D006811 ORTHO05D008419 4.2e-08 63.5 80 52.5
arahy.Tifrunner.gnm1.ann1.XFK461 Arachis hypogaea HOM05D006811 ORTHO05D008419 3.6e-07 60.5 67 52.2


User provided reference genes

Program Settings