Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc06g0002460 Simmondsia chinensis HOM05D007167 ORTHO05D001679 5.4e-46 187.2 87 100.0
Sc14g0003700 Simmondsia chinensis HOM05D007167 ORTHO05D013628 3.5e-21 104.8 76 75.0
Sc14g0004320 Simmondsia chinensis HOM05D007167 ORTHO05D013628 3.5e-21 104.8 76 75.0
ScUNg0001050 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.5e-21 104.8 76 75.0
Sc12g0000010 Simmondsia chinensis HOM05D007167 ORTHO05D001679 6.0e-21 104.0 64 84.4
Sc14g0004040 Simmondsia chinensis HOM05D007167 ORTHO05D001679 6.0e-21 104.0 64 84.4
Sc14g0004080 Simmondsia chinensis HOM05D007167 ORTHO05D001679 6.0e-21 104.0 64 84.4
Sc14g0004280 Simmondsia chinensis HOM05D007167 ORTHO05D001679 6.0e-21 104.0 64 84.4
Sc14g0004310 Simmondsia chinensis HOM05D007167 ORTHO05D001679 6.0e-21 104.0 64 84.4
ScUNg0000500 Simmondsia chinensis HOM05D013320 ORTHO05D001679 7.8e-21 103.6 64 84.4
Sc18g0006340 Simmondsia chinensis HOM05D007167 ORTHO05D000922 3.0e-20 101.7 75 73.3
Atru.chr10.38 Acer truncatum HOM05D007167 ORTHO05D001679 6.6e-20 100.5 60 83.3
arahy.Tifrunner.gnm1.ann1.ET488V Arachis hypogaea HOM05D007167 ORTHO05D001679 8.6e-20 100.1 71 71.8
Sc14g0003770 Simmondsia chinensis HOM05D007167 ORTHO05D001070 1.5e-19 99.4 57 87.7
Rhsim05G0123600 Rhododendron simsii HOM05D016882 ORTHO05D001745 1.9e-19 99.0 59 84.7
Sc14g0003870 Simmondsia chinensis HOM05D007167 ORTHO05D013628 1.9e-19 99.0 69 75.4
Sc14g0004250 Simmondsia chinensis HOM05D007167 ORTHO05D013628 1.9e-19 99.0 69 75.4
ScUNg0000050 Simmondsia chinensis HOM05D007167 ORTHO05D000922 1.9e-19 99.0 69 75.4
ScUNg0000170 Simmondsia chinensis HOM05D007167 ORTHO05D000922 1.9e-19 99.0 69 75.4
ScUNg0000250 Simmondsia chinensis HOM05D007167 ORTHO05D013628 1.9e-19 99.0 69 75.4
ScUNg0000790 Simmondsia chinensis HOM05D007167 ORTHO05D013628 1.9e-19 99.0 69 75.4
ScUNg0001330 Simmondsia chinensis HOM05D007167 ORTHO05D013628 1.9e-19 99.0 69 75.4
EL10Ac5g11394 Beta vulgaris HOM05D007167 ORTHO05D000922 3.3e-19 98.2 62 80.6
Sc14g0004350 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.3e-19 98.2 57 86.0
ScUNg0000310 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.3e-19 98.2 57 86.0
ScUNg0000660 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.3e-19 98.2 57 86.0
ScUNg0000690 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.3e-19 98.2 57 86.0
ScUNg0000730 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.3e-19 98.2 57 86.0
ScUNg0000780 Simmondsia chinensis HOM05D007167 ORTHO05D013628 3.3e-19 98.2 69 75.4
ScUNg0000880 Simmondsia chinensis HOM05D007167 ORTHO05D000922 3.3e-19 98.2 57 86.0
ScUNg0000980 Simmondsia chinensis HOM05D007167 ORTHO05D000922 3.3e-19 98.2 57 86.0
ScUNg0001240 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.3e-19 98.2 57 86.0
ScUNg0001280 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.3e-19 98.2 57 86.0
ScUNg0001370 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.3e-19 98.2 57 86.0
ScUNg0001420 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.3e-19 98.2 57 86.0
ScUNg0001460 Simmondsia chinensis HOM05D007167 ORTHO05D000922 3.3e-19 98.2 57 86.0
unitig_145.g32368 Utricularia gibba HOM05D007167 ORTHO05D001679 3.3e-19 98.2 60 81.7
Lj5g0012521 Lotus japonicus HOM05D007167 ORTHO05D001679 4.3e-19 97.8 60 81.7
Lj5g0016692 Lotus japonicus HOM05D007167 ORTHO05D001679 4.3e-19 97.8 60 81.7
Lj6g0017867 Lotus japonicus HOM05D007167 ORTHO05D001679 4.3e-19 97.8 60 81.7
LjContig00006g0001730 Lotus japonicus HOM05D007167 ORTHO05D001679 4.3e-19 97.8 60 81.7
ScUNg0000440 Simmondsia chinensis HOM05D013320 ORTHO05D000922 4.3e-19 97.8 57 86.0
Medtr0021s0120 Medicago truncatula HOM05D007167 ORTHO05D010211 5.6e-19 97.4 63 77.8
unitig_668.g29633 Utricularia gibba HOM05D007167 ORTHO05D001679 5.6e-19 97.4 59 83.1
Psat0s8399g0040 Pisum sativum HOM05D007167 ORTHO05D001679 1.6e-18 95.9 60 80.0
EL10Ac2g03014 Beta vulgaris HOM05D007167 ORTHO05D001679 1.4e-17 92.8 59 81.4
Sc02g0009430 Simmondsia chinensis HOM05D007167 ORTHO05D001679 1.8e-17 92.4 75 66.7
CsaV3_UNG240550 Cucumis sativus L. HOM05D007167 ORTHO05D001679 3.1e-17 91.7 52 86.5
LjContig00547g0012562 Lotus japonicus HOM05D007167 ORTHO05D001679 5.2e-17 90.9 55 81.8
arahy.Tifrunner.gnm1.ann1.XTZD9Y Arachis hypogaea HOM05D007167 ORTHO05D001679 4.9e-15 84.3 47 87.2
unitig_245.g35372 Utricularia gibba HOM05D007167 ORTHO05D001679 6.4e-15 84.0 49 83.7
Mapoly4038s0001 Marchantia polymorpha HOM05D007167 ORTHO05D001679 8.4e-15 83.6 59 72.9
EL10As19g24181 Beta vulgaris HOM05D007167 ORTHO05D001679 6.0e-13 77.4 42 88.1
Sed0028154 Sechium edule HOM05D007167 ORTHO05D001679 7.8e-13 77.0 41 90.2
SHI35535 Sapria himalayana HOM05D015261 ORTHO05D001679 2.3e-12 75.5 48 75.0
SHI35536 Sapria himalayana HOM05D015261 ORTHO05D000626 2.3e-12 75.5 48 75.0
SHI35538 Sapria himalayana HOM05D015261 ORTHO05D001679 2.3e-12 75.5 48 75.0
SHI39806 Sapria himalayana HOM05D015261 ORTHO05D001679 2.3e-12 75.5 48 75.0
SHI39841 Sapria himalayana HOM05D015261 ORTHO05D001679 2.3e-12 75.5 48 75.0
QL93p0473_0011 Quercus lobata HOM05D016732 ORTHO05D001679 1.5e-08 62.8 41 73.2
QL93p0473_0019 Quercus lobata HOM05D016732 ORTHO05D001679 1.5e-08 62.8 41 73.2
QL93p0473_0029 Quercus lobata HOM05D016732 ORTHO05D001679 1.5e-08 62.8 41 73.2
QL93p0539_0002 Quercus lobata HOM05D016732 ORTHO05D001679 1.5e-08 62.8 41 73.2
QL93p0853_0005 Quercus lobata HOM05D016732 ORTHO05D001679 1.5e-08 62.8 41 73.2
Sc07g0005250 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.4e-08 61.6 57 64.9
TAR408G0001 Trochodendron aralioides HOM05D007167 ORTHO05D001679 7.6e-08 60.5 41 70.7
PGSC0003DMG400019038 Solanum tuberosum HOM05D001319 ORTHO05D000922 1.3e-07 59.7 67 50.7
MCO14G190 Micromonas commoda HOM05D007167 ORTHO05D001679 1.7e-07 59.3 32 84.4
MCO14G191 Micromonas commoda HOM05D007167 ORTHO05D001679 1.7e-07 59.3 32 84.4
MCO14G192 Micromonas commoda HOM05D007167 ORTHO05D001679 1.7e-07 59.3 32 84.4
QL93p0943_0001 Quercus lobata HOM05D016732 ORTHO05D001679 4.9e-07 57.8 40 70.0
CBR_g28706 Chara braunii HOM05D010018 ORTHO05D003704 8.4e-07 57.0 33 78.8
Thecc.07G180900 Theobroma cacao HOM05D007167 ORTHO05D001679 1.1e-06 56.6 50 64.0


User provided reference genes

Program Settings