Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc06g0001810 Simmondsia chinensis HOM05D005940 ORTHO05D007027 5.7e-118 427.6 209 100.0
AUR62027909 Chenopodium quinoa HOM05D005940 ORTHO05D007027 8.9e-63 244.2 174 69.5
CiPaw.02G177100 Carya illinoinensis HOM05D005940 ORTHO05D007027 7.5e-62 241.1 171 67.3
ECA232G2986 Erigeron canadensis HOM05D005940 ORTHO05D007027 5.4e-60 235.0 175 69.1
GSVIVG01016348001 Vitis vinifera HOM05D005940 ORTHO05D007027 7.0e-60 234.6 172 65.7
Gorai.012G093100 Gossypium raimondii HOM05D005940 ORTHO05D007027 3.9e-58 228.8 171 66.1
QL08p056963 Quercus lobata HOM05D005940 ORTHO05D007027 5.1e-58 228.4 171 64.9
Cfa001588 Carpinus fangiana HOM05D005940 ORTHO05D007027 1.9e-57 226.5 171 63.7
TAR623G0325 Trochodendron aralioides HOM05D005940 ORTHO05D007027 4.3e-57 225.3 171 66.7
Duzib114G0016 Durio zibethinus HOM05D005940 ORTHO05D007027 5.6e-57 224.9 172 66.9
Lj1A925T62 Lonicera japonica HOM05D005940 ORTHO05D007027 9.5e-57 224.2 179 62.0
FAN03G1319 Fragaria x ananassa HOM05D005940 ORTHO05D007027 1.2e-56 223.8 171 63.2
Lj5g0027680 Lotus japonicus HOM05D005940 ORTHO05D007027 4.7e-56 221.9 174 58.6
Medtr1g103900 Medicago truncatula HOM05D005940 ORTHO05D007027 4.7e-56 221.9 171 63.7
FAN06G4195 Fragaria x ananassa HOM05D005940 ORTHO05D007027 1.4e-55 220.3 171 62.6
FAN01G1689 Fragaria x ananassa HOM05D005940 ORTHO05D007027 3.1e-55 219.2 171 63.2
FAN10G2498 Fragaria x ananassa HOM05D005940 ORTHO05D007027 6.8e-55 218.0 171 62.0
TWI38G0416 Tripterygium wilfordii HOM05D005940 ORTHO05D007027 2.6e-54 216.1 170 64.1
Atru.chr12.628 Acer truncatum HOM05D005940 ORTHO05D007027 3.4e-54 215.7 168 63.7
Medtr1g030720 Medicago truncatula HOM05D005940 ORTHO05D007027 3.4e-54 215.7 171 62.0
Prupe.2G219400 Prunus persica HOM05D005940 ORTHO05D007027 4.4e-54 215.3 168 64.3
THA.LOC104809986 Tarenaya hassleriana HOM05D005940 ORTHO05D007027 4.4e-54 215.3 172 62.8
Hma1.2p1_0192F.1_g083550 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 5.8e-54 214.9 179 60.9
Hma1.2p1_0192F.1_g083560 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 5.8e-54 214.9 179 60.9
RcHm_v2.0_Chr1g0364231 Rosa chinensis HOM05D005940 ORTHO05D007027 5.8e-54 214.9 171 61.4
Ciclev10033357m.g Citrus clementina HOM05D005940 ORTHO05D007027 7.5e-54 214.5 171 61.4
Eucgr.G02795 Eucalyptus grandis HOM05D005940 ORTHO05D007027 9.9e-54 214.2 172 63.4
HanXRQChr16g0510921 Helianthus annuus HOM05D005940 ORTHO05D007027 1.3e-53 213.8 175 62.9
Glyma.20G145700 Glycine max HOM05D005940 ORTHO05D007027 4.9e-53 211.8 172 59.3
MD01G1112500 Malus domestica HOM05D005940 ORTHO05D007027 4.9e-53 211.8 173 61.3
PGSC0003DMG400010575 Solanum tuberosum HOM05D005940 ORTHO05D007027 6.4e-53 211.5 177 58.2
Oeu055049.1 Olea europaea HOM05D005940 ORTHO05D007027 8.3e-53 211.1 178 57.9
Potri.010G216500 Populus trichocarpa HOM05D005940 ORTHO05D007027 8.3e-53 211.1 165 65.5
Sopen04g020430 Solanum pennellii HOM05D005940 ORTHO05D007027 8.3e-53 211.1 186 56.5
Prupe.2G216400 Prunus persica HOM05D005940 ORTHO05D007027 1.4e-52 210.3 167 63.5
Medtr1g103870 Medicago truncatula HOM05D005940 ORTHO05D007027 3.2e-52 209.1 172 58.1
TPR.G5540 Trifolium pratense HOM05D005940 ORTHO05D007027 3.2e-52 209.1 172 58.7
Gohir.D04G082400 Gossypium hirsutum HOM05D005940 ORTHO05D007027 4.1e-52 208.8 171 62.0
AUR62020800 Chenopodium quinoa HOM05D005940 ORTHO05D007027 5.4e-52 208.4 157 68.2
Cc09_g02600 Coffea canephora HOM05D005940 ORTHO05D007027 5.4e-52 208.4 176 59.1
Solyc04g049890.4 Solanum lycopersicum HOM05D005940 ORTHO05D007027 5.4e-52 208.4 175 58.3
Migut.F01794 Erythranthe guttata HOM05D005940 ORTHO05D007027 1.2e-51 207.2 179 57.0
Aqoxy7G03246 Aquilegia oxysepala HOM05D005940 ORTHO05D007027 1.6e-51 206.8 172 61.0
CANSAT25G0128 Cannabis sativa HOM05D005940 ORTHO05D007027 1.6e-51 206.8 175 60.0
Phvul.007G056900 Phaseolus vulgaris HOM05D005940 ORTHO05D007027 2.1e-51 206.5 171 56.7
BcaNung04648 Brassica carinata HOM05D005940 ORTHO05D007027 3.5e-51 205.7 171 59.6
FvH4_7g20280 Fragaria vesca HOM05D005940 ORTHO05D007027 4.6e-51 205.3 156 64.1
ClCG02G013840 Citrullus lanatus HOM05D005940 ORTHO05D007027 6.0e-51 204.9 171 59.1
Sed0018989 Sechium edule HOM05D005940 ORTHO05D007027 6.0e-51 204.9 170 60.0
CsaV3_5G006320 Cucumis sativus L. HOM05D005940 ORTHO05D007027 1.0e-50 204.1 171 60.2
BolC8t50626H Brassica oleracea HOM05D005940 ORTHO05D007027 1.3e-50 203.8 171 59.1
Lalb_Chr21g0304671 Lupinus albus HOM05D005940 ORTHO05D007027 1.7e-50 203.4 173 57.8
BcaB01g00141 Brassica carinata HOM05D005940 ORTHO05D007027 3.0e-50 202.6 173 60.1
COL.COLO4_23758 Corchorus olitorius HOM05D005940 ORTHO05D007027 3.0e-50 202.6 156 64.7
Carub.0005s2159 Capsella rubella HOM05D005940 ORTHO05D007027 5.1e-50 201.8 171 60.2
Thhalv10010491m.g Eutrema salsugineum HOM05D005940 ORTHO05D007027 5.1e-50 201.8 171 59.1
arahy.Tifrunner.gnm1.ann1.N3JKH2 Arachis hypogaea HOM05D005940 ORTHO05D007027 1.1e-49 200.7 169 56.2
Sp5g07450 Schrenkiella parvula HOM05D005940 ORTHO05D007027 1.1e-49 200.7 171 58.5
AL5G36080 Arabidopsis lyrata HOM05D005940 ORTHO05D007027 1.5e-49 200.3 171 60.8
Lsat_1_v5_gn_1_128021 Lactuca sativa HOM05D005940 ORTHO05D007027 1.9e-49 199.9 170 57.6
PGR102G2278 Punica granatum HOM05D005940 ORTHO05D007027 1.9e-49 199.9 170 57.6
Nn2g10645 Nelumbo nucifera HOM05D005940 ORTHO05D007027 2.5e-49 199.5 157 61.8
PSO357G0422 Papaver somniferum HOM05D005940 ORTHO05D007027 2.5e-49 199.5 171 57.3
DCAR_019137 Daucus carota HOM05D005940 ORTHO05D007027 3.3e-49 199.1 156 63.5
PSO170G0010 Papaver somniferum HOM05D005940 ORTHO05D007027 3.3e-49 199.1 171 57.9
CARHR164970 Cardamine hirsuta HOM05D005940 ORTHO05D007027 4.7e-48 195.3 171 58.5
Peaxi162Scf00208g00211 Petunia axillaris HOM05D005940 ORTHO05D007027 4.7e-48 195.3 171 55.6
arahy.Tifrunner.gnm1.ann1.3UA0UH Arachis hypogaea HOM05D005940 ORTHO05D007027 6.2e-48 194.9 169 55.0
BraA09t40251Z Brassica rapa HOM05D005940 ORTHO05D007027 5.2e-47 191.8 171 56.7
C08p30200 Brassica napus HOM05D005940 ORTHO05D007027 2.0e-46 189.9 157 60.5
Aa31sc33G20 Aethionema arabicum HOM05D005940 ORTHO05D007027 5.8e-46 188.3 170 55.9
Zm00001eb194920 Zea mays HOM05D005940 ORTHO05D007027 5.8e-46 188.3 170 53.5
EL10Ac2g03550 Beta vulgaris HOM05D005940 ORTHO05D007027 7.6e-46 188.0 147 65.3
Ca_10908_v3 Cicer arietinum L. HOM05D005940 ORTHO05D007027 7.6e-46 188.0 145 63.4
Psat6g207800 Pisum sativum HOM05D005940 ORTHO05D007027 1.7e-45 186.8 148 61.5
A09p47960 Brassica napus HOM05D005940 ORTHO05D007027 3.8e-45 185.7 157 59.2
Nitab4.5_0003582g0030 Nicotiana tabacum HOM05D005940 ORTHO05D007027 8.4e-45 184.5 158 58.2
Nitab4.5_0000061g0280 Nicotiana tabacum HOM05D005940 ORTHO05D007027 2.4e-44 183.0 158 57.6
Hund22470 Selenicereus undatus HOM05D005940 ORTHO05D007027 3.2e-44 182.6 146 65.1
VMungo0720G1649 Vigna mungo HOM05D005940 ORTHO05D007027 5.4e-44 181.8 144 61.8
HPP92_019787 Vanilla planifolia HOM05D005940 ORTHO05D007027 1.0e-42 177.6 171 52.0
CDE11G0619 Ceratophyllum demersum HOM05D005940 ORTHO05D007027 6.9e-39 164.9 145 55.2
CAN.G693.9 Capsicum annuum HOM05D005940 ORTHO05D007027 9.0e-39 164.5 150 56.7
BcaNung04643 Brassica carinata HOM05D005940 ORTHO05D007027 1.2e-38 164.1 174 52.9
SalBow3G3596 Salvia bowleyana HOM05D005940 ORTHO05D007027 2.9e-37 159.5 186 45.2
Thecc.10G067000 Theobroma cacao HOM05D005940 ORTHO05D007027 1.1e-36 157.5 111 70.3
Dinv31364 Davidia involucrata HOM05D005940 ORTHO05D007027 6.0e-35 151.8 114 66.7
ATR0594G026 Amborella trichopoda HOM05D005940 ORTHO05D007027 3.3e-33 146.0 125 61.6
AagrBONN_evm.TU.Sc2ySwM_344.1014 Anthoceros agrestis HOM05D005940 ORTHO05D007027 3.8e-29 132.5 132 50.8
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 3.8e-29 132.5 156 48.1
Mapoly0016s0023 Marchantia polymorpha HOM05D005940 ORTHO05D007027 6.0e-27 125.2 175 42.9
PGR142G2620 Punica granatum HOM05D005940 ORTHO05D007027 1.0e-26 124.4 127 56.7
Pp3c1_190 Physcomitrium patens HOM05D005940 ORTHO05D007027 1.3e-26 124.0 120 55.8
Gohir.A05G343900 Gossypium hirsutum HOM05D005940 ORTHO05D007027 2.3e-26 123.2 81 72.8
MELO3C011725.2 Cucumis melo HOM05D005940 ORTHO05D007027 6.7e-26 121.7 108 58.3
Cpa.g.sc1.266 Carica papaya HOM05D005940 ORTHO05D007027 3.3e-25 119.4 84 72.6
MBI14_g28170_MAGBIO Magnolia biondii HOM05D005940 ORTHO05D007027 9.6e-25 117.9 91 60.4
SMO329G0058 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 2.4e-23 113.2 124 46.0
SMO201G0153 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 3.1e-23 112.8 159 40.9
Rhsim09G0154600 Rhododendron simsii HOM05D005940 ORTHO05D007027 7.6e-22 108.2 84 64.3
Manes.10G041400 Manihot esculenta HOM05D005940 ORTHO05D007027 1.7e-21 107.1 96 57.3
Sabra10G0167600 Salix brachista HOM05D005940 ORTHO05D007027 1.1e-20 104.4 80 68.8
Sopen09g009530 Solanum pennellii HOM05D005940 ORTHO05D007027 1.1e-20 104.4 84 58.3
AT3G54970 Arabidopsis thaliana HOM05D005940 ORTHO05D007027 1.9e-20 103.6 80 66.2
Medtr1g030710 Medicago truncatula HOM05D005940 ORTHO05D007027 1.9e-20 103.6 81 64.2
ECA240G2370 Erigeron canadensis HOM05D005940 ORTHO05D007027 1.3e-18 97.4 74 63.5
Haze_16941 Corylus avellana HOM05D005940 ORTHO05D007027 1.4e-15 87.4 128 39.8
SEGI_30186 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 2.4e-15 86.7 91 46.2
CBR_g3301 Chara braunii HOM05D003248 ORTHO05D000301 4.0e-15 85.9 251 27.1
SHI28160 Sapria himalayana HOM05D000105 ORTHO05D000023 2.6e-14 83.2 69 62.3
unitig_46.g18613 Utricularia gibba HOM05D005940 ORTHO05D007027 1.7e-13 80.5 120 43.3
Haze_16942 Corylus avellana HOM05D005940 ORTHO05D007027 7.1e-12 75.1 40 82.5
CSS0028355 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 1.0e-10 71.2 55 65.5
MCO14G149 Micromonas commoda HOM05D005940 ORTHO05D007027 1.8e-10 70.5 129 36.4
PRCOL_00002155 Prasinoderma coloniale HOM05D005940 ORTHO05D007027 3.3e-09 66.2 192 30.7
TPR.G40057 Trifolium pratense HOM05D005940 ORTHO05D007027 3.3e-09 66.2 65 46.2
PRCOL_00002492 Prasinoderma coloniale HOM05D005940 ORTHO05D007027 6.3e-08 62.0 128 35.2
Os02g0252600 Oryza sativa ssp. japonica HOM05D005940 ORTHO05D007027 1.1e-07 61.2 40 65.0
Cre01.g033516 Chlamydomonas reinhardtii HOM05D005940 ORTHO05D007027 2.4e-07 60.1 149 29.5
CSS0026064 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 9.0e-07 58.2 50 60.0
SEGI_22112 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 2.0e-06 57.0 38 68.4


User provided reference genes

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