Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc06g0001700 Simmondsia chinensis HOM05D004638 ORTHO05D005443 1.3e-170 603.2 371 100.0
Ah.16g102130 Amaranthus hybridus HOM05D004638 ORTHO05D005443 1.7e-77 293.9 383 51.4
Duzib052G1194 Durio zibethinus HOM05D004638 ORTHO05D005443 8.6e-77 291.6 346 51.4
Gohir.A09G230500 Gossypium hirsutum HOM05D004638 ORTHO05D005443 8.1e-75 285.0 346 55.8
EL10Ac2g04652 Beta vulgaris HOM05D004638 ORTHO05D005443 1.8e-74 283.9 375 51.5
Cfa014805 Carpinus fangiana HOM05D004638 ORTHO05D005443 2.3e-74 283.5 373 46.9
Gohir.D09G231600 Gossypium hirsutum HOM05D004638 ORTHO05D005443 2.0e-73 280.4 344 53.5
Gorai.006G254300 Gossypium raimondii HOM05D004638 ORTHO05D005443 2.0e-73 280.4 344 53.5
Haze_11486 Corylus avellana HOM05D004638 ORTHO05D005443 3.4e-73 279.6 373 50.9
QL06p021792 Quercus lobata HOM05D004638 ORTHO05D005443 1.7e-72 277.3 355 47.6
TWI53G1292 Tripterygium wilfordii HOM05D004638 ORTHO05D005443 2.9e-72 276.6 342 49.1
COL.COLO4_15993 Corchorus olitorius HOM05D004638 ORTHO05D005443 1.1e-71 274.6 346 50.0
Thecc.04G268000 Theobroma cacao HOM05D004638 ORTHO05D005443 2.4e-71 273.5 342 50.0
ClCG06G018050 Citrullus lanatus HOM05D004638 ORTHO05D005443 5.4e-71 272.3 373 47.7
Duzib212G0972 Durio zibethinus HOM05D004638 ORTHO05D005443 5.4e-71 272.3 346 49.7
Cpa.g.c29962.1 Carica papaya HOM05D004638 ORTHO05D005443 1.2e-70 271.2 346 52.9
Hma1.2p1_0751F.1_g212710 Hydrangea macrophylla HOM05D004638 ORTHO05D005443 4.6e-70 269.2 378 50.8
Aa31LG11G6060 Aethionema arabicum HOM05D004638 ORTHO05D005443 7.8e-70 268.5 352 47.2
CiPaw.01G176300 Carya illinoinensis HOM05D004638 ORTHO05D005443 3.0e-69 266.5 351 48.1
CsaV3_1G000420 Cucumis sativus L. HOM05D004638 ORTHO05D005443 3.0e-69 266.5 352 48.6
C03p02590 Brassica napus HOM05D004638 ORTHO05D005443 8.6e-69 265.0 351 48.1
Thhalv10013953m.g Eutrema salsugineum HOM05D004638 ORTHO05D005443 8.6e-69 265.0 356 47.2
BcaB01g05944 Brassica carinata HOM05D004638 ORTHO05D005443 1.5e-68 264.2 348 48.6
THA.LOC104800549 Tarenaya hassleriana HOM05D004638 ORTHO05D005443 2.5e-68 263.5 356 48.0
Sp6g37620 Schrenkiella parvula HOM05D004638 ORTHO05D005443 4.3e-68 262.7 356 47.2
Glyma.19G074500 Glycine max HOM05D004638 ORTHO05D005443 7.3e-68 261.9 375 45.9
MELO3C023050.2 Cucumis melo HOM05D004638 ORTHO05D005443 9.6e-68 261.5 375 47.5
MELO3C026193.2 Cucumis melo HOM05D004638 ORTHO05D005443 9.6e-68 261.5 373 46.6
BolC3t12811H Brassica oleracea HOM05D004638 ORTHO05D005443 1.2e-67 261.2 348 48.0
CsaV3_2G012340 Cucumis sativus L. HOM05D004638 ORTHO05D005443 2.1e-67 260.4 374 47.3
Haze_15400 Corylus avellana HOM05D004638 ORTHO05D005443 2.8e-67 260.0 373 45.3
Haze_15402 Corylus avellana HOM05D004638 ORTHO05D005443 2.8e-67 260.0 373 45.3
BcaB01g05717 Brassica carinata HOM05D004638 ORTHO05D005443 8.1e-67 258.5 347 47.8
CANSAT01G0932 Cannabis sativa HOM05D004638 ORTHO05D005443 8.1e-67 258.5 374 50.3
CANSAT01G3035 Cannabis sativa HOM05D004638 ORTHO05D005443 8.1e-67 258.5 374 50.3
PGR142G1578 Punica granatum HOM05D004638 ORTHO05D005443 8.1e-67 258.5 378 45.2
BcaB05g21727 Brassica carinata HOM05D004638 ORTHO05D005443 1.4e-66 257.7 345 47.2
Ciclev10025979m.g Citrus clementina HOM05D004638 ORTHO05D005443 3.1e-66 256.5 355 47.0
BraA02t04837Z Brassica rapa HOM05D004638 ORTHO05D005443 1.5e-65 254.2 344 49.1
Atru.chr4.1922 Acer truncatum HOM05D004638 ORTHO05D005443 2.0e-65 253.8 353 44.8
A03p02250 Brassica napus HOM05D004638 ORTHO05D005443 2.6e-65 253.4 349 47.0
BraA03t09589Z Brassica rapa HOM05D004638 ORTHO05D005443 2.6e-65 253.4 349 47.0
DCAR_007662 Daucus carota HOM05D004638 ORTHO05D005443 3.4e-65 253.1 372 45.2
Eucgr.H01383 Eucalyptus grandis HOM05D004638 ORTHO05D005443 4.4e-65 252.7 371 48.5
ClCG06G007330 Citrullus lanatus HOM05D004638 ORTHO05D005443 5.8e-65 252.3 345 47.0
Phvul.003G100800 Phaseolus vulgaris HOM05D004638 ORTHO05D005443 5.8e-65 252.3 348 47.7
Sed0011634 Sechium edule HOM05D004638 ORTHO05D005443 5.8e-65 252.3 374 44.7
TAR623G0129 Trochodendron aralioides HOM05D004638 ORTHO05D005443 5.8e-65 252.3 344 46.8
AL6G15050 Arabidopsis lyrata HOM05D004638 ORTHO05D005443 7.6e-65 251.9 367 45.8
TWI73G0168 Tripterygium wilfordii HOM05D004638 ORTHO05D005443 1.3e-64 251.1 351 48.7
Carub.0006s0414 Capsella rubella HOM05D004638 ORTHO05D005443 2.9e-64 250.0 375 45.3
BcaC03g13151 Brassica carinata HOM05D004638 ORTHO05D005443 1.1e-63 248.1 343 47.8
BolC2t06190H Brassica oleracea HOM05D004638 ORTHO05D005443 1.1e-63 248.1 343 47.8
VMungo1215G0894 Vigna mungo HOM05D004638 ORTHO05D005443 1.4e-63 247.7 371 45.6
FAN24G1523 Fragaria x ananassa HOM05D004638 ORTHO05D005443 2.4e-63 246.9 355 43.9
Manes.15G046900 Manihot esculenta HOM05D004638 ORTHO05D005443 2.4e-63 246.9 344 45.6
MD16G1229100 Malus domestica HOM05D004638 ORTHO05D005443 3.2e-63 246.5 359 46.2
C02p02210 Brassica napus HOM05D004638 ORTHO05D005443 4.2e-63 246.1 343 48.1
FvH4_2g18960 Fragaria vesca HOM05D004638 ORTHO05D005443 7.1e-63 245.4 353 44.5
Lj2C17T3 Lonicera japonica HOM05D004638 ORTHO05D005443 9.3e-63 245.0 339 47.8
CARHR208030 Cardamine hirsuta HOM05D004638 ORTHO05D005443 1.2e-62 244.6 340 46.8
FAN17G1367 Fragaria x ananassa HOM05D004638 ORTHO05D005443 1.6e-62 244.2 355 43.7
GSVIVG01027946001 Vitis vinifera HOM05D004638 ORTHO05D005443 1.6e-62 244.2 351 45.3
Glyma.05G075900 Glycine max HOM05D004638 ORTHO05D005443 3.9e-61 239.6 347 49.6
Prupe.1G051000 Prunus persica HOM05D004638 ORTHO05D005443 1.9e-60 237.3 372 44.9
Potri.010G064100 Populus trichocarpa HOM05D004638 ORTHO05D005443 3.3e-60 236.5 345 45.2
Rhsim09G0102800 Rhododendron simsii HOM05D003876 ORTHO05D005443 4.3e-60 236.1 382 49.2
arahy.Tifrunner.gnm1.ann1.L9DXTM Arachis hypogaea HOM05D004638 ORTHO05D005443 5.6e-60 235.7 370 49.2
Psat2g177000 Pisum sativum HOM05D004638 ORTHO05D005443 7.3e-60 235.3 353 43.9
FAN15G0747 Fragaria x ananassa HOM05D004638 ORTHO05D005443 9.6e-60 235.0 355 43.4
FvH4_4g05060 Fragaria vesca HOM05D004638 ORTHO05D005443 1.6e-59 234.2 355 42.5
FAN12G0885 Fragaria x ananassa HOM05D004638 ORTHO05D005443 1.6e-59 234.2 355 42.5
FAN22G0870 Fragaria x ananassa HOM05D004638 ORTHO05D005443 1.6e-59 234.2 349 45.0
AT5G05210 Arabidopsis thaliana HOM05D004638 ORTHO05D005443 2.1e-59 233.8 376 43.4
CiPaw.02G105500 Carya illinoinensis HOM05D004638 ORTHO05D005443 6.2e-59 232.3 350 46.3
Atru.chr2.74 Acer truncatum HOM05D004638 ORTHO05D005443 8.1e-59 231.9 346 41.9
Potri.008G173300 Populus trichocarpa HOM05D004638 ORTHO05D005443 1.2e-57 228.0 347 48.4
RcHm_v2.0_Chr4g0395981 Rosa chinensis HOM05D004638 ORTHO05D005443 1.2e-57 228.0 354 42.1
Medtr5g012820 Medicago truncatula HOM05D004638 ORTHO05D005443 2.0e-57 227.3 354 43.2
SGA_v2.0_scaffold21G09643 Striga asiatica HOM05D004638 ORTHO05D005443 9.9e-57 224.9 370 41.4
HPP92_027401 Vanilla planifolia HOM05D004638 ORTHO05D005443 9.9e-57 224.9 353 44.8
Dinv31214 Davidia involucrata HOM05D001005 ORTHO05D000836 1.7e-56 224.2 365 43.6
Lalb_Chr11g0063191 Lupinus albus HOM05D004638 ORTHO05D005443 4.9e-56 222.6 351 43.6
ATR0051G063 Amborella trichopoda HOM05D004638 ORTHO05D005443 8.4e-56 221.9 346 44.8
Sabra10G0042900 Salix brachista HOM05D004638 ORTHO05D005443 8.4e-56 221.9 352 46.3
Oeu017919.1 Olea europaea HOM05D004638 ORTHO05D005443 4.2e-55 219.5 356 45.5
Nitab4.5_0001815g0110 Nicotiana tabacum HOM05D004638 ORTHO05D005443 9.3e-55 218.4 352 45.5
TPR.G7963 Trifolium pratense HOM05D004638 ORTHO05D005443 1.2e-54 218.0 350 41.4
PGSC0003DMG400013656 Solanum tuberosum HOM05D004638 ORTHO05D005443 2.1e-54 217.2 341 44.0
Solyc02g082130.2 Solanum lycopersicum HOM05D004638 ORTHO05D005443 1.8e-53 214.2 374 42.2
Sopen02g026790 Solanum pennellii HOM05D004638 ORTHO05D005443 2.3e-53 213.8 374 42.2
Lj4g0009002 Lotus japonicus HOM05D004638 ORTHO05D005443 3.0e-53 213.4 378 46.8
CDE06G2325 Ceratophyllum demersum HOM05D004638 ORTHO05D005443 1.1e-52 211.5 302 46.7
HanXRQChr11g0320631 Helianthus annuus HOM05D004638 ORTHO05D005443 3.3e-52 209.9 368 42.1
Nitab4.5_0000614g0010 Nicotiana tabacum HOM05D004638 ORTHO05D005443 2.1e-51 207.2 347 45.2
HanXRQChr14g0438771 Helianthus annuus HOM05D004638 ORTHO05D005443 3.6e-51 206.5 368 42.4
Lsat_1_v5_gn_9_30280 Lactuca sativa HOM05D004638 ORTHO05D005443 6.2e-51 205.7 340 42.4
Lalb_Chr08g0244981 Lupinus albus HOM05D004638 ORTHO05D005443 6.2e-51 205.7 375 41.1
Ca_03509_v3 Cicer arietinum L. HOM05D004638 ORTHO05D005443 1.4e-50 204.5 376 41.8
SalBow5G3921 Salvia bowleyana HOM05D004638 ORTHO05D005443 9.0e-50 201.8 344 41.6
TPR.G18128 Trifolium pratense HOM05D004638 ORTHO05D005443 1.5e-49 201.1 380 39.2
SGA_v2.0_scaffold41G15829 Striga asiatica HOM05D004638 ORTHO05D005443 3.4e-49 199.9 347 43.5
Peaxi162Scf00048g00171 Petunia axillaris HOM05D004638 ORTHO05D005443 5.8e-49 199.1 343 42.9
CAN.G809.17 Capsicum annuum HOM05D004638 ORTHO05D005443 9.9e-49 198.4 376 44.4
ECA246G4403 Erigeron canadensis HOM05D004638 ORTHO05D005443 3.2e-47 193.4 366 38.5
MSTRG.26536 Avicennia marina HOM05D004638 ORTHO05D005443 9.3e-47 191.8 353 42.2
MSTRG.13923 Avicennia marina HOM05D004638 ORTHO05D005443 3.5e-46 189.9 351 42.2
COL.COLO4_32263 Corchorus olitorius HOM05D004638 ORTHO05D005443 1.1e-44 184.9 345 41.7
Aqoxy5G00949 Aquilegia oxysepala HOM05D004638 ORTHO05D005443 3.3e-44 183.3 368 39.9
MD13G1224300 Malus domestica HOM05D004638 ORTHO05D005443 8.1e-43 178.7 282 44.7
AUR62014564 Chenopodium quinoa HOM05D004638 ORTHO05D005443 1.8e-42 177.6 379 42.0
Zm00001eb248040 Zea mays HOM05D004638 ORTHO05D005443 6.9e-42 175.6 399 40.4
Migut.L01893 Erythranthe guttata HOM05D004638 ORTHO05D005443 1.7e-40 171.0 356 37.6
Actinidia06751 Actinidia chinensis HOM05D004638 ORTHO05D005443 2.2e-40 170.6 290 49.0
Mapoly0122s0042 Marchantia polymorpha HOM05D004638 ORTHO05D005443 6.5e-40 169.1 366 37.2
Carub.0004s0850 Capsella rubella HOM05D004638 ORTHO05D005443 7.1e-39 165.6 332 39.2
CSS0022021 Camellia sinensis var. sinensis HOM05D004638 ORTHO05D005443 3.5e-38 163.3 282 45.4
CDE07G1349 Ceratophyllum demersum HOM05D002308 ORTHO05D005297 2.3e-37 160.6 312 38.8
Medtr2g079000 Medicago truncatula HOM05D004638 ORTHO05D005443 1.5e-36 157.9 302 39.1
Cc04_g09510 Coffea canephora HOM05D004638 ORTHO05D005443 4.3e-36 156.4 379 41.4
SEGI_31736 Sequoiadendron giganteum HOM05D004638 ORTHO05D005443 1.6e-35 154.5 360 38.9
Os05g0372200 Oryza sativa ssp. japonica HOM05D004638 ORTHO05D005443 4.8e-35 152.9 362 42.8
AL4G22550 Arabidopsis lyrata HOM05D004638 ORTHO05D005443 1.4e-34 151.4 294 37.4
SMO119G0466 Selaginella moellendorffii HOM05D004638 ORTHO05D005443 4.5e-33 146.4 348 37.1
Nn4g24624 Nelumbo nucifera HOM05D004638 ORTHO05D005443 5.9e-33 146.0 209 46.4
Pp3c8_4010 Physcomitrium patens HOM05D004638 ORTHO05D005443 5.0e-32 142.9 362 37.0
HanXRQChr11g0320651 Helianthus annuus HOM05D004638 ORTHO05D005443 5.1e-29 132.9 175 48.6
arahy.Tifrunner.gnm1.ann1.XHZZ6B Arachis hypogaea HOM05D004638 ORTHO05D005443 8.7e-29 132.1 324 38.3
AagrBONN_evm.TU.Sc2ySwM_368.887 Anthoceros agrestis HOM05D004638 ORTHO05D005443 4.8e-27 126.3 306 32.0
Oeu016931.1 Olea europaea HOM05D004638 ORTHO05D005443 1.1e-23 115.2 277 45.5
Actinidia22435 Actinidia chinensis HOM05D004638 ORTHO05D005443 2.7e-22 110.5 136 51.5
AUR62039396 Chenopodium quinoa HOM05D004638 ORTHO05D005443 5.1e-21 106.3 110 59.1
Lj3g0004611 Lotus japonicus HOM05D004638 ORTHO05D005443 3.3e-20 103.6 306 33.0
CBR_g30748 Chara braunii HOM05D003542 ORTHO05D004799 8.2e-19 99.0 426 30.0
Atru.chr4.1888 Acer truncatum HOM05D004638 ORTHO05D005443 1.4e-18 98.2 307 27.0
AUR62039395 Chenopodium quinoa HOM05D004638 ORTHO05D005443 2.4e-18 97.4 135 45.2
AT2G27750 Arabidopsis thaliana HOM05D004638 ORTHO05D005443 3.8e-16 90.1 145 38.6
unitig_22.g5966 Utricularia gibba HOM05D004638 ORTHO05D005443 5.0e-16 89.7 177 38.4
arahy.Tifrunner.gnm1.ann1.EFW0VL Arachis hypogaea HOM05D004638 ORTHO05D005443 2.1e-14 84.3 180 38.3
Actinidia16422 Actinidia chinensis HOM05D004638 ORTHO05D005443 6.1e-14 82.8 116 52.6
Manes.12G121700 Manihot esculenta HOM05D004638 ORTHO05D005443 1.1e-12 78.6 208 39.4
unitig_22.g5967 Utricularia gibba HOM05D004638 ORTHO05D005443 1.3e-11 75.1 102 45.1
MCO04G484 Micromonas commoda HOM05D004638 ORTHO05D005443 4.1e-10 70.1 342 33.3
Sabra08G0132300 Salix brachista HOM05D004638 ORTHO05D005443 3.5e-09 67.0 70 50.0
Nitab4.5_0000047g0240 Nicotiana tabacum HOM05D004638 ORTHO05D005443 1.5e-07 61.6 79 48.1
Lj3g0021975 Lotus japonicus HOM05D004638 ORTHO05D005443 7.2e-07 59.3 133 39.1
RcHm_v2.0_Chr3g0493171 Rosa chinensis HOM05D004638 ORTHO05D005443 1.2e-06 58.5 43 53.5
Medtr2g079040 Medicago truncatula HOM05D004638 ORTHO05D005443 4.7e-06 56.6 47 63.8
RcHm_v2.0_Chr5g0061161 Rosa chinensis HOM05D004638 ORTHO05D005443 4.7e-06 56.6 43 51.2


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