Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc06g0000580 Simmondsia chinensis HOM05D007351 ORTHO05D009386 1.5e-115 419.5 203 100.0
EL10Ac2g02569 Beta vulgaris HOM05D007351 ORTHO05D009386 6.3e-90 334.3 197 81.2
Hund03010 Selenicereus undatus HOM05D007351 ORTHO05D009386 1.8e-89 332.8 203 81.3
GSVIVG01035772001 Vitis vinifera HOM05D007351 ORTHO05D009386 2.9e-87 325.5 195 80.5
TWI34G1290 Tripterygium wilfordii HOM05D007351 ORTHO05D009386 1.1e-86 323.6 198 80.3
TAR625G1337 Trochodendron aralioides HOM05D007351 ORTHO05D009386 1.1e-86 323.6 190 81.6
Nn2g11909 Nelumbo nucifera HOM05D007351 ORTHO05D009386 1.9e-86 322.8 195 79.5
Potri.006G249000 Populus trichocarpa HOM05D007351 ORTHO05D009386 7.3e-86 320.9 197 79.2
AUR62032351 Chenopodium quinoa HOM05D007351 ORTHO05D009386 4.7e-85 318.2 205 77.1
Sabra06G0194800 Salix brachista HOM05D007351 ORTHO05D009386 1.0e-84 317.0 197 78.7
Prupe.1G471900 Prunus persica HOM05D007351 ORTHO05D009386 1.4e-84 316.6 197 77.7
CiPaw.08G014100 Carya illinoinensis HOM05D007351 ORTHO05D009386 5.2e-84 314.7 193 79.8
MD08G1141900 Malus domestica HOM05D007351 ORTHO05D009386 8.9e-84 313.9 178 83.7
RcHm_v2.0_Chr6g0298791 Rosa chinensis HOM05D007351 ORTHO05D009386 8.9e-84 313.9 197 77.7
Actinidia15698 Actinidia chinensis HOM05D007351 ORTHO05D009386 1.2e-83 313.5 198 77.8
FAN27G2935 Fragaria x ananassa HOM05D007351 ORTHO05D009386 2.6e-83 312.4 194 78.4
Eucgr.C01805 Eucalyptus grandis HOM05D007351 ORTHO05D009386 3.4e-83 312.0 170 87.1
FvH4_2g29770 Fragaria vesca HOM05D007351 ORTHO05D009386 3.4e-83 312.0 194 78.4
Hma1.2p1_0000F.1_g000940 Hydrangea macrophylla HOM05D007351 ORTHO05D009386 3.4e-83 312.0 191 79.1
FAN24G0983 Fragaria x ananassa HOM05D007351 ORTHO05D009386 4.4e-83 311.6 194 78.4
Gorai.004G110800 Gossypium raimondii HOM05D007351 ORTHO05D009386 5.8e-83 311.2 190 80.0
MBI04_g00950_MAGBIO Magnolia biondii HOM05D007351 ORTHO05D009386 7.5e-83 310.8 194 77.3
Manes.16G118400 Manihot esculenta HOM05D007351 ORTHO05D009386 1.3e-82 310.1 205 74.1
FAN15G3188 Fragaria x ananassa HOM05D007351 ORTHO05D009386 1.7e-82 309.7 194 77.8
CSS0046405 Camellia sinensis var. sinensis HOM05D007351 ORTHO05D009386 3.7e-82 308.5 198 75.3
COL.COLO4_24001 Corchorus olitorius HOM05D007351 ORTHO05D009386 4.9e-82 308.1 199 76.9
Lj8A616G46 Lonicera japonica HOM05D007351 ORTHO05D009386 6.4e-82 307.8 193 77.7
PSO017G1621 Papaver somniferum HOM05D007351 ORTHO05D009386 4.1e-81 305.1 176 79.5
Cpa.g.sc91.32 Carica papaya HOM05D007351 ORTHO05D009386 5.4e-81 304.7 202 75.7
AT2G25605 Arabidopsis thaliana HOM05D007351 ORTHO05D009386 9.2e-81 303.9 191 77.0
Lsat_1_v5_gn_6_21681 Lactuca sativa HOM05D007351 ORTHO05D009386 9.2e-81 303.9 196 74.5
Thecc.09G147600 Theobroma cacao HOM05D007351 ORTHO05D009386 9.2e-81 303.9 166 85.5
Gohir.A08G090000 Gossypium hirsutum HOM05D007351 ORTHO05D009386 1.6e-80 303.1 190 78.4
PSO170G0157 Papaver somniferum HOM05D007351 ORTHO05D009386 2.0e-80 302.8 213 70.0
CARHR115710 Cardamine hirsuta HOM05D007351 ORTHO05D009386 2.7e-80 302.4 198 75.8
HanXRQChr13g0402411 Helianthus annuus HOM05D007351 ORTHO05D009386 3.5e-80 302.0 197 74.1
Thhalv10000330m.g Eutrema salsugineum HOM05D007351 ORTHO05D009386 4.6e-80 301.6 198 75.3
BcaB06g28079 Brassica carinata HOM05D007351 ORTHO05D009386 7.8e-80 300.8 201 74.6
A04p19820 Brassica napus HOM05D007351 ORTHO05D009386 1.0e-79 300.4 204 73.5
Aa31sc586G10 Aethionema arabicum HOM05D007351 ORTHO05D009386 1.3e-79 300.1 201 73.1
Carub.0004s0533 Capsella rubella HOM05D007351 ORTHO05D009386 1.3e-79 300.1 191 75.9
BraA04t17570Z Brassica rapa HOM05D007351 ORTHO05D009386 2.3e-79 299.3 200 74.0
AL4G17070 Arabidopsis lyrata HOM05D007351 ORTHO05D009386 3.0e-79 298.9 191 75.4
MSTRG.11754 Avicennia marina HOM05D007351 ORTHO05D009386 3.0e-79 298.9 170 82.9
BcaC02g08337 Brassica carinata HOM05D007351 ORTHO05D009386 3.0e-79 298.9 200 74.0
C04p55560 Brassica napus HOM05D007351 ORTHO05D009386 3.0e-79 298.9 200 74.0
BolC4t27080H Brassica oleracea HOM05D007351 ORTHO05D009386 3.0e-79 298.9 200 74.0
Medtr3g107860 Medicago truncatula HOM05D007351 ORTHO05D009386 8.6e-79 297.4 173 76.9
Atru.chr7.2359 Acer truncatum HOM05D007351 ORTHO05D009386 1.1e-78 297.0 203 73.9
arahy.Tifrunner.gnm1.ann1.C4YKET Arachis hypogaea HOM05D007351 ORTHO05D009386 1.1e-78 297.0 191 71.7
Psat5g027160 Pisum sativum HOM05D007351 ORTHO05D009386 1.5e-78 296.6 173 77.5
Ciclev10009550m.g Citrus clementina HOM05D007351 ORTHO05D009386 1.9e-78 296.2 205 75.6
Ca_15711_v3 Cicer arietinum L. HOM05D007351 ORTHO05D009386 2.5e-78 295.8 202 69.3
THA.LOC104804500 Tarenaya hassleriana HOM05D007351 ORTHO05D009386 3.3e-78 295.4 167 82.6
CDE06G1133 Ceratophyllum demersum HOM05D007351 ORTHO05D009386 4.3e-78 295.0 196 74.5
Nitab4.5_0000508g0220 Nicotiana tabacum HOM05D007351 ORTHO05D009386 4.3e-78 295.0 190 74.7
Lalb_Chr23g0268831 Lupinus albus HOM05D007351 ORTHO05D009386 7.3e-78 294.3 171 78.9
Glyma.06G071600 Glycine max HOM05D007351 ORTHO05D009386 9.5e-78 293.9 173 76.3
Solyc08g067430.4 Solanum lycopersicum HOM05D007351 ORTHO05D009386 1.2e-77 293.5 191 74.3
Cc11_g01660 Coffea canephora HOM05D007351 ORTHO05D009386 1.6e-77 293.1 194 73.2
ECA233G0102 Erigeron canadensis HOM05D007351 ORTHO05D009386 2.1e-77 292.7 204 70.6
Migut.A00300 Erythranthe guttata HOM05D007351 ORTHO05D009386 3.6e-77 292.0 172 80.2
Peaxi162Scf00251g01128 Petunia axillaris HOM05D007351 ORTHO05D009386 3.6e-77 292.0 176 77.8
MELO3C003678.2 Cucumis melo HOM05D007351 ORTHO05D009386 4.7e-77 291.6 197 70.6
Sed0005695 Sechium edule HOM05D007351 ORTHO05D009386 1.1e-76 290.4 175 75.4
PGSC0003DMG400007382 Solanum tuberosum HOM05D007351 ORTHO05D009386 1.1e-76 290.4 191 73.3
Aqoxy7G02003 Aquilegia oxysepala HOM05D007351 ORTHO05D009386 1.4e-76 290.0 192 73.4
Phvul.009G096100 Phaseolus vulgaris HOM05D007351 ORTHO05D009386 1.4e-76 290.0 171 76.0
Lj1g0014043 Lotus japonicus HOM05D007351 ORTHO05D009386 1.8e-76 289.7 172 77.3
Glyma.04G069700 Glycine max HOM05D007351 ORTHO05D009386 2.3e-76 289.3 173 75.7
Os05g0574700 Oryza sativa ssp. japonica HOM05D007351 ORTHO05D009386 3.4e-75 285.4 175 77.1
arahy.Tifrunner.gnm1.ann1.8MNE4Q Arachis hypogaea HOM05D007351 ORTHO05D009386 4.4e-75 285.0 212 65.1
TPR.G27335 Trifolium pratense HOM05D007351 ORTHO05D009386 4.4e-75 285.0 171 76.0
Rhsim07G0150700 Rhododendron simsii HOM05D007351 ORTHO05D009386 5.8e-75 284.6 210 68.1
unitig_32.g11667 Utricularia gibba HOM05D007351 ORTHO05D009386 9.8e-75 283.9 195 71.8
SGA_v2.0_scaffold448G51771 Striga asiatica HOM05D007351 ORTHO05D009386 2.2e-74 282.7 176 77.8
Nitab4.5_0002339g0070 Nicotiana tabacum HOM05D007351 ORTHO05D009386 4.9e-74 281.6 193 72.0
Sopen08g021360 Solanum pennellii HOM05D007351 ORTHO05D009386 6.4e-74 281.2 191 72.3
ATR0680G179 Amborella trichopoda HOM05D007351 ORTHO05D009386 1.4e-73 280.0 169 78.7
AUR62041846 Chenopodium quinoa HOM05D007351 ORTHO05D009386 4.6e-72 275.0 164 81.1
vmacro05202 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 7.8e-72 274.2 153 82.4
VMungo1309G2796 Vigna mungo HOM05D007351 ORTHO05D009386 3.3e-70 268.9 182 70.9
SEGI_27006 Sequoiadendron giganteum HOM05D007351 ORTHO05D009386 8.9e-68 260.8 167 71.9
Gohir.D08G102800 Gossypium hirsutum HOM05D007351 ORTHO05D009386 2.6e-67 259.2 165 78.8
Sp4g05090 Schrenkiella parvula HOM05D007351 ORTHO05D009386 4.9e-66 255.0 137 86.9
QL12p031742 Quercus lobata HOM05D007351 ORTHO05D009386 1.4e-65 253.4 174 74.1
CsaV3_3G046600 Cucumis sativus L. HOM05D007351 ORTHO05D009386 1.9e-65 253.1 141 80.9
Duzib150G1343 Durio zibethinus HOM05D007351 ORTHO05D009386 6.0e-64 248.1 162 77.2
PGR031G1798 Punica granatum HOM05D007351 ORTHO05D009386 1.7e-63 246.5 182 69.2
DCAR_003046 Daucus carota HOM05D007351 ORTHO05D009386 3.9e-63 245.4 142 81.0
Mapoly0036s0071 Marchantia polymorpha HOM05D007351 ORTHO05D009386 4.3e-62 241.9 163 66.9
Zm00001eb344390 Zea mays HOM05D007351 ORTHO05D009386 4.7e-61 238.4 137 79.6
CANSAT11G2455 Cannabis sativa HOM05D007351 ORTHO05D009386 1.5e-59 233.4 194 61.9
Pp3c17_16830 Physcomitrium patens HOM05D007351 ORTHO05D009386 3.4e-59 232.3 166 65.7
SMO269G0024 Selaginella moellendorffii HOM05D007351 ORTHO05D009386 4.9e-58 228.4 163 64.4
AagrBONN_evm.TU.Sc2ySwM_228.1243 Anthoceros agrestis HOM05D007351 ORTHO05D009386 4.2e-57 225.3 152 69.1
Oeu045191.1 Olea europaea HOM05D007351 ORTHO05D009386 1.3e-53 213.8 153 70.6
Haze_21592 Corylus avellana HOM05D007351 ORTHO05D009386 4.0e-52 208.8 111 85.6
CBR_g40414 Chara braunii HOM05D007351 ORTHO05D009386 1.4e-49 200.3 170 56.5
CANSAT54G2502 Cannabis sativa HOM05D007351 ORTHO05D009386 7.6e-43 177.9 165 58.2
Cre17.g746897 Chlamydomonas reinhardtii HOM05D007351 ORTHO05D009386 5.7e-30 135.2 139 45.3
vmacro05206 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 4.3e-14 82.4 165 34.5
Lsat_1_v5_gn_4_127141 Lactuca sativa HOM05D007351 ORTHO05D009386 2.5e-09 66.6 37 75.7
Pp3c16_22900 Physcomitrium patens HOM05D033550 ORTHO05D017832 2.5e-09 66.6 133 35.3
Cre16.g683300 Chlamydomonas reinhardtii HOM05D027270 ORTHO05D017832 2.3e-07 60.1 132 33.3
Mapoly0006s0206 Marchantia polymorpha HOM05D017363 ORTHO05D018319 2.6e-06 56.6 172 25.0


User provided reference genes

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