Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc06g0000480 Simmondsia chinensis HOM05D000590 ORTHO05D009145 1.0e-162 576.6 280 100.0
AUR62031566 Chenopodium quinoa HOM05D000590 ORTHO05D009145 8.9e-50 201.4 298 43.6
AUR62012442 Chenopodium quinoa HOM05D000590 ORTHO05D009145 8.3e-48 194.9 298 43.3
EL10Ac2g04159 Beta vulgaris HOM05D000590 ORTHO05D009145 6.1e-43 178.7 290 41.0
GSVIVG01035925001 Vitis vinifera HOM05D000590 ORTHO05D009145 6.1e-43 178.7 305 38.7
Hund04451 Selenicereus undatus HOM05D000590 ORTHO05D009145 6.8e-42 175.3 293 40.3
CiPaw.07G226700 Carya illinoinensis HOM05D000590 ORTHO05D009145 3.4e-41 172.9 286 40.9
Cfa013108 Carpinus fangiana HOM05D000590 ORTHO05D009145 1.1e-39 167.9 259 42.9
QL02p020481 Quercus lobata HOM05D000590 ORTHO05D009145 9.2e-39 164.9 246 41.9
Duzib168G1510 Durio zibethinus HOM05D000590 ORTHO05D009145 2.7e-38 163.3 263 39.2
Haze_21466 Corylus avellana HOM05D000590 ORTHO05D009145 1.3e-37 161.0 261 40.6
Ah.10g035720 Amaranthus hybridus HOM05D000590 ORTHO05D009145 1.7e-37 160.6 304 39.1
Thecc.09G020000 Theobroma cacao HOM05D000590 ORTHO05D009145 8.6e-37 158.3 300 37.7
TWI32G0726 Tripterygium wilfordii HOM05D000590 ORTHO05D009145 8.6e-37 158.3 293 36.5
Atru.chr7.2494 Acer truncatum HOM05D000590 ORTHO05D009145 1.5e-36 157.5 307 37.5
TAR636G2375 Trochodendron aralioides HOM05D000590 ORTHO05D009145 7.3e-36 155.2 307 35.2
Ciclev10010345m.g Citrus clementina HOM05D000590 ORTHO05D009145 6.2e-35 152.1 266 38.7
Lj7A728T60 Lonicera japonica HOM05D000590 ORTHO05D009145 3.1e-34 149.8 275 38.2
Manes.03G012400 Manihot esculenta HOM05D000590 ORTHO05D009145 3.1e-34 149.8 306 37.3
vmacro11208 Vaccinium macrocarpon HOM05D000590 ORTHO05D009145 1.2e-33 147.9 290 37.6
CANSAT25G0126 Cannabis sativa HOM05D000590 ORTHO05D009145 1.7e-32 144.1 278 36.0
vmacro21896 Vaccinium macrocarpon HOM05D000590 ORTHO05D009145 6.4e-32 142.1 286 37.4
Dinv18162 Davidia involucrata HOM05D000590 ORTHO05D009145 3.2e-31 139.8 326 35.0
Potri.018G023000 Populus trichocarpa HOM05D000590 ORTHO05D009145 7.1e-31 138.7 303 35.0
arahy.Tifrunner.gnm1.ann1.Y6F8M2 Arachis hypogaea HOM05D000590 ORTHO05D009145 1.2e-30 137.9 251 34.3
Nn8g39696 Nelumbo nucifera HOM05D000590 ORTHO05D009145 1.2e-30 137.9 269 36.8
Dinv18158 Davidia involucrata HOM05D000590 ORTHO05D009145 1.6e-30 137.5 326 34.7
Prupe.1G485700 Prunus persica HOM05D000590 ORTHO05D009145 2.1e-30 137.1 295 35.3
HanXRQChr01g0030621 Helianthus annuus HOM05D000590 ORTHO05D009145 2.7e-30 136.7 290 33.8
ECA248G0426 Erigeron canadensis HOM05D000590 ORTHO05D009145 4.6e-30 136.0 264 35.6
COL.COLO4_18904 Corchorus olitorius HOM05D000590 ORTHO05D009145 1.3e-29 134.4 104 61.5
MD15G1130200 Malus domestica HOM05D000590 ORTHO05D009145 5.1e-29 132.5 296 36.1
Oeu010890.3 Olea europaea HOM05D000590 ORTHO05D009145 5.1e-29 132.5 279 34.4
CSS0004481 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D009145 6.6e-29 132.1 286 35.0
Cc08_g00250 Coffea canephora HOM05D000590 ORTHO05D009145 1.1e-28 131.3 266 35.3
Ca_13040_v3 Cicer arietinum L. HOM05D000590 ORTHO05D009145 3.3e-28 129.8 83 66.3
Ca_30354_v3 Cicer arietinum L. HOM05D000590 ORTHO05D009145 3.3e-28 129.8 83 66.3
Glyma.14G112700 Glycine max HOM05D000590 ORTHO05D009145 1.6e-27 127.5 254 34.6
Sabra18G0025500 Salix brachista HOM05D000590 ORTHO05D009145 1.6e-27 127.5 283 36.0
Glyma.17G215200 Glycine max HOM05D000590 ORTHO05D009145 6.2e-27 125.6 266 35.3
TPR.G38859 Trifolium pratense HOM05D000590 ORTHO05D009145 6.2e-27 125.6 83 66.3
Nitab4.5_0002992g0010 Nicotiana tabacum HOM05D028555 ORTHO05D009145 1.4e-26 124.4 297 32.7
Lj5g0010657 Lotus japonicus HOM05D000590 ORTHO05D009145 3.1e-26 123.2 77 74.0
Actinidia13216 Actinidia chinensis HOM05D000590 ORTHO05D009145 4.0e-26 122.9 81 66.7
Nitab4.5_0005958g0030 Nicotiana tabacum HOM05D000590 ORTHO05D009145 4.0e-26 122.9 277 33.6
Medtr1g012870 Medicago truncatula HOM05D000590 ORTHO05D009145 1.2e-25 121.3 81 67.9
Phvul.001G047700 Phaseolus vulgaris HOM05D000590 ORTHO05D009145 2.0e-25 120.6 255 34.9
RcHm_v2.0_Chr6g0297291 Rosa chinensis HOM05D000590 ORTHO05D009145 1.7e-24 117.5 76 69.7
FAN20G2931 Fragaria x ananassa HOM05D000590 ORTHO05D009145 3.7e-24 116.3 83 62.7
FvH4_2g28350 Fragaria vesca HOM05D000590 ORTHO05D009145 4.9e-24 115.9 83 62.7
FAN27G0748 Fragaria x ananassa HOM05D000590 ORTHO05D009145 4.9e-24 115.9 83 62.7
FAN24G2365 Fragaria x ananassa HOM05D000590 ORTHO05D009145 5.4e-23 112.5 83 61.4
VMungo0647G0757 Vigna mungo HOM05D000590 ORTHO05D009145 7.1e-23 112.1 75 68.0
SalBow4G1906 Salvia bowleyana HOM05D000590 ORTHO05D009145 4.6e-22 109.4 282 33.3
Lsat_1_v5_gn_1_43780 Lactuca sativa HOM05D000590 ORTHO05D009145 6.0e-22 109.0 253 35.2
ATR0767G168 Amborella trichopoda HOM05D000590 ORTHO05D009145 2.3e-21 107.1 260 30.4
Aqoxy7G03545 Aquilegia oxysepala HOM05D000590 ORTHO05D009145 3.0e-21 106.7 271 30.6
THA.LOC104815012 Tarenaya hassleriana HOM05D000590 ORTHO05D009145 8.6e-21 105.1 122 45.1
SGA_v2.0_scaffold64G21984 Striga asiatica HOM05D000590 ORTHO05D009145 1.1e-18 98.2 75 58.7
Mapoly0002s0198 Marchantia polymorpha HOM05D000590 ORTHO05D009145 9.3e-15 85.1 99 42.4
Pp3c1_28750 Physcomitrium patens HOM05D000590 ORTHO05D009145 9.3e-15 85.1 106 38.7
SEGI_06897 Sequoiadendron giganteum HOM05D000590 ORTHO05D009145 9.3e-15 85.1 271 27.7
Pp3c2_10000 Physcomitrium patens HOM05D000590 ORTHO05D009145 5.1e-13 79.3 94 42.6
Rhsim02G0205200 Rhododendron simsii HOM05D000590 ORTHO05D009145 1.5e-12 77.8 347 25.9
HPP92_000484 Vanilla planifolia HOM05D000590 ORTHO05D009145 7.3e-12 75.5 248 27.8
Pp3c14_19990 Physcomitrium patens HOM05D000590 ORTHO05D009145 2.8e-11 73.6 89 38.2
Zm00001eb104540 Zea mays HOM05D000590 ORTHO05D009145 2.6e-09 67.0 77 41.6
Duzib150G1205 Durio zibethinus HOM05D000590 ORTHO05D009145 1.1e-07 61.6 217 27.6
Sopen08g011870 Solanum pennellii HOM05D000590 ORTHO05D009145 1.4e-07 61.2 51 51.0


User provided reference genes

Program Settings