Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc05g0009130 Simmondsia chinensis HOM05D000101 ORTHO05D019520 1.6e-135 486.1 244 100.0
Sc05g0009150 Simmondsia chinensis HOM05D000101 ORTHO05D000089 6.6e-118 427.6 241 87.1
Ah.09g234970 Amaranthus hybridus HOM05D000101 ORTHO05D019520 9.1e-67 257.7 221 59.3
EL10Ac8g20039 Beta vulgaris HOM05D000101 ORTHO05D019520 1.5e-37 160.6 209 42.1
EL10Ac8g20011 Beta vulgaris HOM05D000101 ORTHO05D019520 2.8e-23 113.2 225 35.1
AUR62021988 Chenopodium quinoa HOM05D000101 ORTHO05D019520 4.4e-21 105.9 229 35.4
AUR62012666 Chenopodium quinoa HOM05D000101 ORTHO05D019520 1.1e-19 101.3 223 34.5
RcHm_v2.0_Chr5g0006641 Rosa chinensis HOM05D000101 ORTHO05D000089 1.7e-12 77.4 164 31.1
TAR629G0266 Trochodendron aralioides HOM05D000101 ORTHO05D000089 7.8e-10 68.6 206 28.6
Prupe.4G038500 Prunus persica HOM05D000101 ORTHO05D019520 5.1e-09 65.9 133 36.1
Dinv00143 Davidia involucrata HOM05D000101 ORTHO05D000089 6.6e-09 65.5 126 35.7
Lj4g0017827 Lotus japonicus HOM05D000101 ORTHO05D003282 1.1e-08 64.7 126 31.0
RhsimUnG0074600 Rhododendron simsii HOM05D000101 ORTHO05D003282 1.1e-08 64.7 143 30.8
CSS0045387 Camellia sinensis var. sinensis HOM05D000101 ORTHO05D002559 1.5e-08 64.3 138 34.1
Oeu041297.1 Olea europaea HOM05D000101 ORTHO05D000089 3.3e-08 63.2 145 30.3
MBI02_g35907_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 4.3e-08 62.8 133 33.1
Cc00_g21080 Coffea canephora HOM05D000101 ORTHO05D000089 1.6e-07 60.8 158 29.1
MBI05_g44824_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 1.6e-07 60.8 156 32.1
Dinv02505 Davidia involucrata HOM05D000101 ORTHO05D000089 2.1e-07 60.5 131 32.8
Peaxi162Scf00485g00043 Petunia axillaris HOM05D000101 ORTHO05D000089 2.1e-07 60.5 152 30.3
MBI05_g36586_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 2.8e-07 60.1 156 32.1
Thecc.02G013800 Theobroma cacao HOM05D000101 ORTHO05D003282 4.7e-07 59.3 125 28.8
DCAR_014285 Daucus carota HOM05D000083 ORTHO05D001732 6.2e-07 58.9 147 32.7
Dinv19550 Davidia involucrata HOM05D000101 ORTHO05D000089 6.2e-07 58.9 166 29.5
Thecc.03G111000 Theobroma cacao HOM05D000101 ORTHO05D003282 6.2e-07 58.9 155 27.7
VMungo0331G1995 Vigna mungo HOM05D000092 ORTHO05D000042 1.1e-06 58.2 103 33.0
Actinidia38978 Actinidia chinensis HOM05D000512 ORTHO05D002559 1.4e-06 57.8 131 32.8
Actinidia38979 Actinidia chinensis HOM05D000101 ORTHO05D003282 1.4e-06 57.8 136 27.9
Lsat_1_v5_gn_9_121380 Lactuca sativa HOM05D000041 ORTHO05D000452 1.4e-06 57.8 124 32.3
Lj5A277G40 Lonicera japonica HOM05D000101 ORTHO05D002559 1.4e-06 57.8 188 27.1
Nitab4.5_0002703g0030 Nicotiana tabacum HOM05D000101 ORTHO05D000089 1.4e-06 57.8 155 28.4
Glyma.05G165600 Glycine max HOM05D000101 ORTHO05D003282 1.8e-06 57.4 128 31.2
MBI16_g26399_MAGBIO Magnolia biondii HOM05D000101 ORTHO05D000089 2.4e-06 57.0 162 29.0
Potri.019G014360 Populus trichocarpa HOM05D000101 ORTHO05D000089 2.4e-06 57.0 92 38.0
GSVIVG01023210001 Vitis vinifera HOM05D000101 ORTHO05D003282 2.4e-06 57.0 131 29.8
Cpa.g.c32363 Carica papaya HOM05D000092 ORTHO05D000042 3.1e-06 56.6 113 30.1
COL.COLO4_16254 Corchorus olitorius HOM05D000101 ORTHO05D000089 3.1e-06 56.6 124 34.7
Nitab4.5_0007732g0060 Nicotiana tabacum HOM05D000101 ORTHO05D000089 3.1e-06 56.6 155 28.4
Eucgr.L01865 Eucalyptus grandis HOM05D000101 ORTHO05D003282 4.0e-06 56.2 111 35.1
RhsimUnG0201700 Rhododendron simsii HOM05D000101 ORTHO05D003282 4.0e-06 56.2 99 33.3
GSVIVG01023203001 Vitis vinifera HOM05D000101 ORTHO05D003282 4.0e-06 56.2 134 30.6
Potri.019G014328 Populus trichocarpa HOM05D000101 ORTHO05D000089 5.2e-06 55.8 152 30.3
Dinv09053 Davidia involucrata HOM05D000101 ORTHO05D000089 6.8e-06 55.5 142 33.1
Potri.019G014334 Populus trichocarpa HOM05D000101 ORTHO05D000089 6.8e-06 55.5 113 38.9
Duzib213G0220 Durio zibethinus HOM05D000101 ORTHO05D000089 8.9e-06 55.1 153 28.1
Oeu010939.1 Olea europaea HOM05D000101 ORTHO05D000089 8.9e-06 55.1 154 26.0
VMungo0331G0510 Vigna mungo HOM05D000092 ORTHO05D000042 8.9e-06 55.1 102 31.4


User provided reference genes

Program Settings