Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc05g0008270 Simmondsia chinensis HOM05D000007 ORTHO05D388012 1.5e-59 232.6 118 100.0
Sc05g0008260 Simmondsia chinensis HOM05D000007 ORTHO05D000017 2.7e-24 115.5 89 66.3
Sc05g0008370 Simmondsia chinensis HOM05D000007 ORTHO05D000017 6.4e-10 67.8 67 49.3
EL10As6g23636 Beta vulgaris HOM05D000007 ORTHO05D000017 2.1e-08 62.8 64 46.9
MSTRG.13115 Avicennia marina HOM05D000007 ORTHO05D000017 6.0e-08 61.2 69 47.8
CiPaw.09G103100 Carya illinoinensis HOM05D000007 ORTHO05D000017 1.0e-07 60.5 57 47.4
Manes.09G077400 Manihot esculenta HOM05D000007 ORTHO05D000017 1.0e-07 60.5 84 42.9
Cfa000091 Carpinus fangiana HOM05D000007 ORTHO05D000017 1.8e-07 59.7 81 42.0
CiPaw.10G078600 Carya illinoinensis HOM05D000007 ORTHO05D000017 1.8e-07 59.7 56 50.0
Peaxi162Scf00231g00027 Petunia axillaris HOM05D000007 ORTHO05D000017 2.3e-07 59.3 66 43.9
Sc05g0008340 Simmondsia chinensis HOM05D000007 ORTHO05D000017 2.3e-07 59.3 63 46.0
Gohir.A06G153400 Gossypium hirsutum HOM05D000007 ORTHO05D000017 5.1e-07 58.2 67 44.8
Duzib168G0318 Durio zibethinus HOM05D000007 ORTHO05D000017 8.7e-07 57.4 68 44.1
Gohir.D06G160200 Gossypium hirsutum HOM05D000007 ORTHO05D000017 8.7e-07 57.4 73 41.1
MD05G1358500 Malus domestica HOM05D000007 ORTHO05D000017 8.7e-07 57.4 72 41.7
Manes.09G077457 Manihot esculenta HOM05D000007 ORTHO05D000017 8.7e-07 57.4 65 41.5
Prupe.4G009600 Prunus persica HOM05D000007 ORTHO05D000017 8.7e-07 57.4 61 44.3
CiPaw.09G103200 Carya illinoinensis HOM05D000007 ORTHO05D000017 1.1e-06 57.0 57 43.9
Haze_06943 Corylus avellana HOM05D000007 ORTHO05D000017 1.1e-06 57.0 58 50.0
Gorai.010G186900 Gossypium raimondii HOM05D000007 ORTHO05D000017 1.5e-06 56.6 67 43.3
QL05p069347 Quercus lobata HOM05D000007 ORTHO05D000017 1.5e-06 56.6 57 47.4
QL05p069384 Quercus lobata HOM05D000007 ORTHO05D000017 1.5e-06 56.6 57 45.6
Haze_06950 Corylus avellana HOM05D000007 ORTHO05D000017 1.9e-06 56.2 56 46.4
AUR62012551 Chenopodium quinoa HOM05D000007 ORTHO05D000017 2.5e-06 55.8 57 43.9
PGSC0003DMG400017998 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.5e-06 55.8 66 42.4
MD10G1332600 Malus domestica HOM05D000007 ORTHO05D000017 4.3e-06 55.1 61 42.6
Thecc.06G234400 Theobroma cacao HOM05D000007 ORTHO05D000017 4.3e-06 55.1 56 48.2
Sopen01g004180 Solanum pennellii HOM05D000007 ORTHO05D000017 5.6e-06 54.7 67 37.3
CSS0000759 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D033922 7.4e-06 54.3 56 46.4
Actinidia07901 Actinidia chinensis HOM05D000007 ORTHO05D000017 9.6e-06 53.9 59 40.7


User provided reference genes

Program Settings