Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc05g0007220 Simmondsia chinensis HOM05D007489 ORTHO05D008037 0.0e+00 1579.7 856 100.0
EL10Ac8g20488 Beta vulgaris HOM05D007489 ORTHO05D008037 1.2e-86 325.5 870 34.6
AUR62036546 Chenopodium quinoa HOM05D007489 ORTHO05D008037 1.2e-73 282.3 861 33.1
CSS0034374 Camellia sinensis var. sinensis HOM05D007489 ORTHO05D008037 9.6e-71 272.7 877 31.8
Prupe.4G057700 Prunus persica HOM05D007489 ORTHO05D008037 3.4e-68 264.2 873 33.4
TAR627G1016 Trochodendron aralioides HOM05D007489 ORTHO05D008037 1.7e-67 261.9 876 31.3
MD10G1283800 Malus domestica HOM05D007489 ORTHO05D008037 1.6e-65 255.4 875 32.8
Manes.16G035700 Manihot esculenta HOM05D007489 ORTHO05D008037 1.6e-65 255.4 982 31.4
Dinv40650 Davidia involucrata HOM05D007489 ORTHO05D008037 6.9e-61 240.0 870 30.9
Haze_06275 Corylus avellana HOM05D007489 ORTHO05D008037 5.8e-60 236.9 895 30.7
Hma1.2p1_0155F.1_g068400 Hydrangea macrophylla HOM05D007489 ORTHO05D008037 1.7e-59 235.3 861 31.2
Nn1g09012 Nelumbo nucifera HOM05D007489 ORTHO05D008037 8.4e-59 233.0 868 30.5
Duzib235G0638 Durio zibethinus HOM05D007489 ORTHO05D008037 2.7e-57 228.0 880 30.8
Rhsim02G0140400 Rhododendron simsii HOM05D007489 ORTHO05D008037 2.3e-56 224.9 920 28.9
Sabra11G0045300 Salix brachista HOM05D007489 ORTHO05D008037 3.0e-56 224.6 908 30.4
TPR.G16271 Trifolium pratense HOM05D007489 ORTHO05D008037 1.5e-55 222.2 896 30.6
Glyma.07G204500 Glycine max HOM05D007489 ORTHO05D008037 1.3e-54 219.2 843 30.8
Medtr4g087875 Medicago truncatula HOM05D007489 ORTHO05D008037 1.3e-54 219.2 879 31.9
Duzib192G0524 Durio zibethinus HOM05D007489 ORTHO05D008037 1.5e-52 212.2 874 31.6
Thecc.06G175600 Theobroma cacao HOM05D007489 ORTHO05D008037 3.4e-52 211.1 848 30.7
Phvul.003G057800 Phaseolus vulgaris HOM05D007489 ORTHO05D008037 7.6e-52 209.9 867 30.0
Gohir.D10G031400 Gossypium hirsutum HOM05D007489 ORTHO05D008037 9.9e-52 209.5 880 29.9
RcHm_v2.0_Chr7g0216741 Rosa chinensis HOM05D007489 ORTHO05D008037 1.7e-51 208.8 892 30.6
Hund23951 Selenicereus undatus HOM05D007489 ORTHO05D008037 3.8e-51 207.6 594 35.0
Lj1A1196T41 Lonicera japonica HOM05D007489 ORTHO05D008037 1.4e-50 205.7 813 30.0
Potri.011G063500 Populus trichocarpa HOM05D007489 ORTHO05D008037 4.2e-50 204.1 843 29.9
Aqoxy5G02160 Aquilegia oxysepala HOM05D007489 ORTHO05D008037 9.3e-50 203.0 866 29.0
RcHm_v2.0_Chr7g0215591 Rosa chinensis HOM05D007489 ORTHO05D008037 2.1e-49 201.8 887 29.1
arahy.Tifrunner.gnm1.ann1.S0ULK2 Arachis hypogaea HOM05D007489 ORTHO05D008037 1.8e-48 198.7 854 29.9
Gorai.011G033000 Gossypium raimondii HOM05D007489 ORTHO05D008037 2.5e-47 194.9 860 30.0
FAN08G0692 Fragaria x ananassa HOM05D007489 ORTHO05D008037 4.3e-47 194.1 922 29.3
ClCG01G023550 Citrullus lanatus HOM05D007489 ORTHO05D008037 1.3e-46 192.6 879 28.6
FvH4_5g26040 Fragaria vesca HOM05D007489 ORTHO05D008037 3.7e-46 191.0 895 29.5
MELO3C007230.2 Cucumis melo HOM05D007489 ORTHO05D008037 1.1e-45 189.5 854 27.9
ECA234G3308 Erigeron canadensis HOM05D007489 ORTHO05D008037 2.0e-44 185.3 876 29.8
PGR004G0633 Punica granatum HOM05D007489 ORTHO05D008037 2.0e-44 185.3 882 27.9
Lj4g0021888 Lotus japonicus HOM05D007489 ORTHO05D008037 3.4e-44 184.5 859 28.3
FAN04G2784 Fragaria x ananassa HOM05D007489 ORTHO05D008037 1.7e-43 182.2 917 28.5
FAN18G0613 Fragaria x ananassa HOM05D007489 ORTHO05D008037 2.2e-43 181.8 913 28.1
PSO063G1126 Papaver somniferum HOM05D007489 ORTHO05D008037 1.9e-42 178.7 955 27.7
Ca_26049_v3 Cicer arietinum L. HOM05D007489 ORTHO05D008037 1.2e-41 176.0 863 27.5
HanXRQChr11g0327141 Helianthus annuus HOM05D007489 ORTHO05D008037 2.7e-41 174.9 880 28.9
CAN.G79.55 Capsicum annuum HOM05D007489 ORTHO05D008037 6.0e-41 173.7 904 27.8
CANSAT54G0123 Cannabis sativa HOM05D007489 ORTHO05D008037 7.9e-41 173.3 920 27.3
Sed0003654 Sechium edule HOM05D007489 ORTHO05D008037 3.9e-40 171.0 864 26.9
Thhalv10024499m.g Eutrema salsugineum HOM05D010718 ORTHO05D008037 5.1e-40 170.6 859 27.9
AUR62031141 Chenopodium quinoa HOM05D007489 ORTHO05D008037 1.1e-39 169.5 804 28.2
Atru.chr10.1727 Acer truncatum HOM05D007489 ORTHO05D008037 2.8e-38 164.9 265 46.4
Gohir.A10G030500 Gossypium hirsutum HOM05D007489 ORTHO05D008037 2.4e-37 161.8 842 28.0
CiPaw.10G057000 Carya illinoinensis HOM05D007489 ORTHO05D008037 9.0e-37 159.8 288 42.4
Oeu041109.2 Olea europaea HOM05D007489 ORTHO05D008037 3.4e-36 157.9 924 26.8
AL7G35790 Arabidopsis lyrata HOM05D010718 ORTHO05D008037 1.7e-35 155.6 871 28.1
arahy.Tifrunner.gnm1.ann1.X1E7Z2 Arachis hypogaea HOM05D007489 ORTHO05D008037 5.0e-35 154.1 817 28.2
Lsat_1_v5_gn_4_50401 Lactuca sativa HOM05D007489 ORTHO05D008037 1.9e-34 152.1 879 28.0
QL05p044409 Quercus lobata HOM05D007489 ORTHO05D008037 3.0e-32 144.8 249 44.2
Sopen02g022090 Solanum pennellii HOM05D007489 ORTHO05D008037 8.8e-32 143.3 883 26.0
CsaV3_6G050690 Cucumis sativus L. HOM05D007489 ORTHO05D008037 1.5e-31 142.5 927 24.4
Lalb_Chr16g0384211 Lupinus albus HOM05D007489 ORTHO05D008037 2.5e-31 141.7 339 34.8
AT4G18490 Arabidopsis thaliana HOM05D010718 ORTHO05D008037 3.3e-31 141.4 873 28.1
Aa31LG6G1240 Aethionema arabicum HOM05D010718 ORTHO05D008037 7.4e-31 140.2 848 27.0
A03p51330 Brassica napus HOM05D010718 ORTHO05D008037 1.4e-29 136.0 899 28.4
Sp7g15530 Schrenkiella parvula HOM05D010718 ORTHO05D008037 3.1e-29 134.8 884 27.0
Nitab4.5_0001928g0060 Nicotiana tabacum HOM05D007489 ORTHO05D008037 2.0e-28 132.1 888 26.1
PGR004G2208 Punica granatum HOM05D007489 ORTHO05D008037 7.7e-28 130.2 183 47.5
CARHR225330 Cardamine hirsuta HOM05D010718 ORTHO05D008037 2.2e-27 128.6 881 27.0
BcaC06g30581 Brassica carinata HOM05D010718 ORTHO05D008037 2.9e-27 128.3 889 27.9
GSVIVG01021171001 Vitis vinifera HOM05D007489 ORTHO05D008037 8.5e-27 126.7 229 40.2
Os01g0755100 Oryza sativa ssp. japonica HOM05D007489 ORTHO05D008037 3.2e-26 124.8 867 26.6
C01p12440 Brassica napus HOM05D010718 ORTHO05D008037 7.2e-26 123.6 912 25.4
COL.COLO4_31347 Corchorus olitorius HOM05D007489 ORTHO05D008037 9.4e-26 123.2 939 24.3
SalBow6G3268 Salvia bowleyana HOM05D007489 ORTHO05D008037 1.6e-25 122.5 918 26.7
VMungo0251G2273 Vigna mungo HOM05D007489 ORTHO05D008037 2.1e-25 122.1 256 36.3
BraA01t00996Z Brassica rapa HOM05D010718 ORTHO05D008037 2.7e-25 121.7 902 25.6
Carub.0007s2274 Capsella rubella HOM05D010718 ORTHO05D008037 2.7e-25 121.7 863 26.9
DCAR_004024 Daucus carota HOM05D007489 ORTHO05D008037 2.7e-25 121.7 286 35.7
A01p10500 Brassica napus HOM05D010718 ORTHO05D008037 4.7e-25 120.9 921 26.7
SalBow6G6000 Salvia bowleyana HOM05D007489 ORTHO05D008037 6.1e-25 120.6 911 26.0
Migut.J01535 Erythranthe guttata HOM05D007489 ORTHO05D008037 5.1e-24 117.5 821 24.6
Ciclev10017982m.g Citrus clementina HOM05D007489 ORTHO05D008037 2.0e-23 115.5 90 63.3
BraA03t14214Z Brassica rapa HOM05D010718 ORTHO05D008037 9.7e-23 113.2 880 26.4
ATR0602G208 Amborella trichopoda HOM05D007489 ORTHO05D008037 6.3e-22 110.5 833 25.5
MD05G1304700 Malus domestica HOM05D007489 ORTHO05D008037 6.3e-22 110.5 68 79.4
BcaNung02709 Brassica carinata HOM05D010718 ORTHO05D008037 8.2e-22 110.2 863 26.9
MBI06_g31401_MAGBIO Magnolia biondii HOM05D007489 ORTHO05D008037 9.1e-21 106.7 106 52.8
DCAR_007972 Daucus carota HOM05D007489 ORTHO05D008037 2.6e-20 105.1 103 56.3
Glyma.13G171550 Glycine max HOM05D007489 ORTHO05D008037 1.0e-19 103.2 164 42.1
C07p49740 Brassica napus HOM05D010718 ORTHO05D008037 1.3e-19 102.8 873 26.3
MBI06_g31402_MAGBIO Magnolia biondii HOM05D007489 ORTHO05D008037 2.2e-19 102.1 599 28.4
Zm00001eb152860 Zea mays HOM05D007489 ORTHO05D008037 5.0e-19 100.9 230 39.1
unitig_0.g132 Utricularia gibba HOM05D007489 ORTHO05D008037 6.5e-19 100.5 168 38.1
Solyc02g077210.1 Solanum lycopersicum HOM05D007489 ORTHO05D008037 1.9e-18 99.0 226 38.5
Peaxi162Scf00223g01419 Petunia axillaris HOM05D007489 ORTHO05D008037 4.2e-18 97.8 201 37.3
SEGI_30603 Sequoiadendron giganteum HOM05D007489 ORTHO05D008037 2.3e-16 92.0 126 44.4
PSO782G2467 Papaver somniferum HOM05D007489 ORTHO05D008037 6.7e-16 90.5 125 48.0
BolC1t01218H Brassica oleracea HOM05D010718 ORTHO05D008037 1.1e-15 89.7 909 25.4
SGA_v2.0_scaffold66G22379 Striga asiatica HOM05D007489 ORTHO05D008037 1.5e-15 89.4 894 23.0
Peaxi162Scf00223g01422 Petunia axillaris HOM05D007489 ORTHO05D008037 4.4e-15 87.8 92 54.3
Aqoxy534s001 Aquilegia oxysepala HOM05D007489 ORTHO05D008037 3.7e-14 84.7 116 47.4
Glyma.13G171600 Glycine max HOM05D007489 ORTHO05D008037 3.7e-14 84.7 231 34.2
SalBow2G2687 Salvia bowleyana HOM05D007489 ORTHO05D008037 2.4e-13 82.0 67 55.2
Cpa.g.sc7.37 Carica papaya HOM05D007489 ORTHO05D008037 9.1e-13 80.1 315 28.3
Nitab4.5_0000376g0220 Nicotiana tabacum HOM05D007489 ORTHO05D008037 1.2e-12 79.7 424 28.1
MD05G1304800 Malus domestica HOM05D007489 ORTHO05D008037 2.6e-12 78.6 230 32.2
SalBow1G4805 Salvia bowleyana HOM05D007489 ORTHO05D008037 2.6e-12 78.6 67 53.7
arahy.Tifrunner.gnm1.ann1.8IS92U Arachis hypogaea HOM05D007489 ORTHO05D008037 7.7e-12 77.0 65 63.1
FAN13G1982 Fragaria x ananassa HOM05D007489 ORTHO05D008037 1.0e-11 76.6 913 23.8
HPP92_007965 Vanilla planifolia HOM05D007489 ORTHO05D008037 4.2e-10 71.2 174 33.3
Ah.10g026690 Amaranthus hybridus HOM05D008762 ORTHO05D011252 5.5e-10 70.9 209 34.9
HPP92_008016 Vanilla planifolia HOM05D007489 ORTHO05D008037 1.2e-09 69.7 858 23.3
SMO340G0226 Selaginella moellendorffii HOM05D029666 ORTHO05D008037 2.3e-08 65.5 54 53.7
SMO356G0683 Selaginella moellendorffii HOM05D029666 ORTHO05D008037 3.0e-08 65.1 54 53.7
Eucgr.D00548 Eucalyptus grandis HOM05D007489 ORTHO05D008037 2.8e-06 58.5 34 79.4


User provided reference genes

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