Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc05g0007190 Simmondsia chinensis HOM05D000566 ORTHO05D008456 4.0e-105 384.8 197 100.0
Atru.chr10.1700 Acer truncatum HOM05D000566 ORTHO05D008456 6.2e-66 254.6 196 70.4
COL.COLO4_31322 Corchorus olitorius HOM05D000566 ORTHO05D000686 2.6e-64 249.2 153 82.4
TWI38G1860 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 3.4e-64 248.8 202 67.8
Hund23960 Selenicereus undatus HOM05D000566 ORTHO05D008456 5.8e-64 248.1 201 67.2
Prupe.4G059300 Prunus persica HOM05D000566 ORTHO05D008456 2.2e-63 246.1 183 69.9
Ciclev10016472m.g Citrus clementina HOM05D000566 ORTHO05D008456 2.9e-63 245.7 199 70.9
Gohir.A06G134006 Gossypium hirsutum HOM05D000566 ORTHO05D008456 1.1e-62 243.8 153 80.4
MELO3C007220.2 Cucumis melo HOM05D000566 ORTHO05D008456 1.4e-62 243.4 194 68.6
Duzib192G0190 Durio zibethinus HOM05D000566 ORTHO05D008456 1.9e-62 243.0 153 81.0
Lalb_Chr16g0384251 Lupinus albus HOM05D000566 ORTHO05D008456 2.4e-62 242.7 180 71.1
CANSAT35G0195 Cannabis sativa HOM05D000566 ORTHO05D008456 4.2e-62 241.9 192 67.7
Gohir.D06G136400 Gossypium hirsutum HOM05D000566 ORTHO05D008456 4.2e-62 241.9 153 79.7
Gorai.010G158600 Gossypium raimondii HOM05D000566 ORTHO05D008456 1.2e-61 240.4 153 79.1
Manes.16G037200 Manihot esculenta HOM05D000566 ORTHO05D008456 1.2e-61 240.4 166 77.7
ClCG01G023650 Citrullus lanatus HOM05D000566 ORTHO05D008456 2.1e-61 239.6 195 67.2
Dinv04627 Davidia involucrata HOM05D000566 ORTHO05D008456 2.1e-61 239.6 170 76.5
Sed0006380 Sechium edule HOM05D000566 ORTHO05D008456 2.7e-61 239.2 171 74.3
Hma1.2p1_0437F.1_g152980 Hydrangea macrophylla HOM05D000566 ORTHO05D008456 3.5e-61 238.8 171 76.0
QL05p046292 Quercus lobata HOM05D000566 ORTHO05D008456 3.5e-61 238.8 123 93.5
Thecc.06G173200 Theobroma cacao HOM05D000566 ORTHO05D008456 3.5e-61 238.8 170 73.5
RcHm_v2.0_Chr5g0010321 Rosa chinensis HOM05D000566 ORTHO05D008456 7.8e-61 237.7 184 71.7
AUR62036584 Chenopodium quinoa HOM05D000566 ORTHO05D008456 1.0e-60 237.3 120 96.7
Rhsim13G0191700 Rhododendron simsii HOM05D000566 ORTHO05D000686 1.0e-60 237.3 172 73.8
CiPaw.09G068300 Carya illinoinensis HOM05D000566 ORTHO05D008456 1.7e-60 236.5 164 76.8
FAN21G0306 Fragaria x ananassa HOM05D000566 ORTHO05D008456 1.7e-60 236.5 192 68.8
TAR626G0526 Trochodendron aralioides HOM05D000566 ORTHO05D008456 1.7e-60 236.5 198 67.2
Ah.09g233690 Amaranthus hybridus HOM05D000566 ORTHO05D008456 2.3e-60 236.1 175 74.3
Haze_06259 Corylus avellana HOM05D000566 ORTHO05D008456 3.9e-60 235.3 199 64.3
FAN25G1525 Fragaria x ananassa HOM05D000566 ORTHO05D000686 3.9e-60 235.3 153 80.4
Phvul.003G058300 Phaseolus vulgaris HOM05D000566 ORTHO05D008456 3.9e-60 235.3 162 74.1
vmacro03936 Vaccinium macrocarpon HOM05D000566 ORTHO05D008456 5.1e-60 235.0 172 75.0
FvH4_3g07991 Fragaria vesca HOM05D000566 ORTHO05D008456 6.6e-60 234.6 183 69.9
Lj4g0018718 Lotus japonicus HOM05D000566 ORTHO05D008456 1.1e-59 233.8 168 72.6
Cfa000591 Carpinus fangiana HOM05D000566 ORTHO05D008456 1.9e-59 233.0 191 66.0
Eucgr.E02712 Eucalyptus grandis HOM05D000566 ORTHO05D008456 1.9e-59 233.0 199 66.8
Glyma.13G171000 Glycine max HOM05D000566 ORTHO05D008456 1.9e-59 233.0 142 83.8
THA.LOC104814247 Tarenaya hassleriana HOM05D000566 ORTHO05D008456 1.9e-59 233.0 143 82.5
FAN11G2813 Fragaria x ananassa HOM05D000566 ORTHO05D008456 2.5e-59 232.6 183 69.4
Potri.011G064600 Populus trichocarpa HOM05D000566 ORTHO05D008456 2.5e-59 232.6 167 74.3
Actinidia16807 Actinidia chinensis HOM05D000566 ORTHO05D008456 5.6e-59 231.5 122 92.6
Ca_26053_v3 Cicer arietinum L. HOM05D000566 ORTHO05D008456 5.6e-59 231.5 123 91.9
GSVIVG01021190001 Vitis vinifera HOM05D000566 ORTHO05D008456 5.6e-59 231.5 122 93.4
MSTRG.7396 Avicennia marina HOM05D000566 ORTHO05D008456 9.6e-59 230.7 162 74.1
EL10Ac8g20507 Beta vulgaris HOM05D000566 ORTHO05D008456 9.6e-59 230.7 223 60.5
Cc02_g14640 Coffea canephora HOM05D000566 ORTHO05D008456 1.6e-58 229.9 122 91.8
PGR042G3563 Punica granatum HOM05D000566 ORTHO05D008456 1.6e-58 229.9 198 63.6
VMungo0251G1655 Vigna mungo HOM05D000566 ORTHO05D008456 1.6e-58 229.9 164 73.2
Aqoxy1G03201 Aquilegia oxysepala HOM05D000566 ORTHO05D008456 2.1e-58 229.6 126 86.5
Lalb_Chr05g0218771 Lupinus albus HOM05D000566 ORTHO05D008456 2.1e-58 229.6 159 75.5
Medtr4g087750 Medicago truncatula HOM05D000566 ORTHO05D008456 2.8e-58 229.2 165 74.5
MD10G1282600 Malus domestica HOM05D000566 ORTHO05D008456 4.8e-58 228.4 142 81.0
Psat7g118880 Pisum sativum HOM05D000566 ORTHO05D008456 4.8e-58 228.4 123 91.1
Sp1g24970 Schrenkiella parvula HOM05D000566 ORTHO05D008456 4.8e-58 228.4 165 70.9
Oeu039926.1 Olea europaea HOM05D000566 ORTHO05D008456 6.2e-58 228.0 138 82.6
PSO675G8854 Papaver somniferum HOM05D000566 ORTHO05D008456 6.2e-58 228.0 154 75.3
HanXRQChr07g0186931 Helianthus annuus HOM05D000566 ORTHO05D008456 1.4e-57 226.9 185 65.9
ECA234G0195 Erigeron canadensis HOM05D000566 ORTHO05D000686 1.8e-57 226.5 147 78.2
CAN.G337.143 Capsicum annuum HOM05D000566 ORTHO05D008456 3.1e-57 225.7 122 89.3
SGA_v2.0_scaffold1G00030 Striga asiatica HOM05D000566 ORTHO05D008456 3.1e-57 225.7 176 68.2
Lsat_1_v5_gn_4_50020 Lactuca sativa HOM05D000566 ORTHO05D008456 4.0e-57 225.3 153 77.1
TPR.G16280 Trifolium pratense HOM05D000566 ORTHO05D008456 9.0e-57 224.2 199 66.3
Migut.M01050 Erythranthe guttata HOM05D000566 ORTHO05D008456 1.2e-56 223.8 146 78.1
PGSC0003DMG401022314 Solanum tuberosum HOM05D000566 ORTHO05D008456 1.2e-56 223.8 122 89.3
CDE02G2902 Ceratophyllum demersum HOM05D000566 ORTHO05D008456 1.5e-56 223.4 122 90.2
unitig_699.g19342 Utricularia gibba HOM05D000566 ORTHO05D008456 1.5e-56 223.4 154 76.0
DCAR_004017 Daucus carota HOM05D000566 ORTHO05D008456 2.0e-56 223.0 152 75.0
Peaxi162Scf01479g00012 Petunia axillaris HOM05D000566 ORTHO05D008456 2.0e-56 223.0 143 79.7
MBI06_g25985_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 2.6e-56 222.6 150 76.0
PSO541G3700 Papaver somniferum HOM05D000566 ORTHO05D008456 2.6e-56 222.6 192 63.0
Sabra11G0046400 Salix brachista HOM05D000566 ORTHO05D008456 7.6e-56 221.1 169 69.8
Sopen07g032890 Solanum pennellii HOM05D000566 ORTHO05D008456 7.6e-56 221.1 122 88.5
Solyc07g064690.1 Solanum lycopersicum HOM05D000566 ORTHO05D008456 9.9e-56 220.7 122 88.5
Carub.0001s2723 Capsella rubella HOM05D000566 ORTHO05D008456 2.9e-55 219.2 141 77.3
Medtr4g087740 Medicago truncatula HOM05D000566 ORTHO05D008456 2.9e-55 219.2 135 81.5
BcaB03g13911 Brassica carinata HOM05D000566 ORTHO05D008456 3.8e-55 218.8 176 67.6
Thhalv10009067m.g Eutrema salsugineum HOM05D000566 ORTHO05D008456 8.4e-55 217.6 122 86.1
AT1G29040 Arabidopsis thaliana HOM05D000566 ORTHO05D008456 1.1e-54 217.2 175 68.0
SalBow8G0706 Salvia bowleyana HOM05D000566 ORTHO05D008456 1.1e-54 217.2 167 70.7
BcaC06g35392 Brassica carinata HOM05D000566 ORTHO05D008456 1.4e-54 216.9 143 74.8
CARHR028250 Cardamine hirsuta HOM05D000566 ORTHO05D008456 1.4e-54 216.9 169 68.6
Zm00001eb162000 Zea mays HOM05D000566 ORTHO05D008456 1.9e-54 216.5 155 71.6
A07p11000 Brassica napus HOM05D000566 ORTHO05D008456 3.2e-54 215.7 184 65.8
BraA07t28892Z Brassica rapa HOM05D000566 ORTHO05D008456 3.2e-54 215.7 184 65.8
C07p16640 Brassica napus HOM05D000566 ORTHO05D008456 5.4e-54 214.9 143 73.4
BolC7t42164H Brassica oleracea HOM05D000566 ORTHO05D008456 7.1e-54 214.5 143 74.1
Os01g0613300 Oryza sativa ssp. japonica HOM05D000566 ORTHO05D008456 9.3e-54 214.2 146 74.7
HPP92_024140 Vanilla planifolia HOM05D000566 ORTHO05D008456 1.2e-53 213.8 122 85.2
AL1G42750 Arabidopsis lyrata HOM05D000566 ORTHO05D008456 2.1e-53 213.0 122 83.6
Pp3c23_18520 Physcomitrium patens HOM05D000566 ORTHO05D008456 3.5e-53 212.2 135 75.6
Lj2A297T108 Lonicera japonica HOM05D000566 ORTHO05D008456 5.1e-52 208.4 184 63.6
Pp3c24_14610 Physcomitrium patens HOM05D000566 ORTHO05D008456 8.7e-52 207.6 122 78.7
Nitab4.5_0000206g0050 Nicotiana tabacum HOM05D000566 ORTHO05D008456 1.5e-51 206.8 156 71.2
Peaxi162Scf01070g00226 Petunia axillaris HOM05D000566 ORTHO05D008456 3.1e-49 199.1 194 58.8
Aa31LG6G11510 Aethionema arabicum HOM05D000566 ORTHO05D008456 5.3e-49 198.4 153 69.3
ATR0602G168 Amborella trichopoda HOM05D000566 ORTHO05D008456 1.5e-48 196.8 148 69.6
AUR62031167 Chenopodium quinoa HOM05D000566 ORTHO05D008456 2.0e-48 196.4 99 98.0
Glyma.13G170900 Glycine max HOM05D000566 ORTHO05D008456 7.6e-48 194.5 122 77.0
VMungo0251G1536 Vigna mungo HOM05D000566 ORTHO05D008456 9.3e-46 187.6 122 72.1
SEGI_28108 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 1.8e-44 183.3 123 69.1
Glyma.04G136400 Glycine max HOM05D000566 ORTHO05D008456 3.9e-44 182.2 122 72.1
arahy.Tifrunner.gnm1.ann1.AZL87G Arachis hypogaea HOM05D000566 ORTHO05D008456 3.7e-42 175.6 122 68.9
arahy.Tifrunner.gnm1.ann1.441UHN Arachis hypogaea HOM05D000566 ORTHO05D008456 8.2e-42 174.5 122 68.0
AagrBONN_evm.TU.Sc2ySwM_344.3192 Anthoceros agrestis HOM05D000566 ORTHO05D008456 3.4e-40 169.1 106 75.5
CsaV3_6G050800 Cucumis sativus L. HOM05D000566 ORTHO05D008456 1.6e-37 160.2 151 60.3
Cpa.g.sc7.62 Carica papaya HOM05D000566 ORTHO05D008456 1.9e-35 153.3 161 60.2
Nn1g04373 Nelumbo nucifera HOM05D000566 ORTHO05D008456 1.1e-33 147.5 141 61.7
FAN16G3553 Fragaria x ananassa HOM05D000566 ORTHO05D008456 7.7e-32 141.4 133 61.7
Nitab4.5_0010317g0010 Nicotiana tabacum HOM05D000566 ORTHO05D008456 1.0e-31 141.0 199 46.7
MCO02G300 Micromonas commoda HOM05D000566 ORTHO05D008456 6.7e-28 128.3 121 54.5
TWI38G1453 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 1.5e-24 117.1 67 86.6
PRCOL_00004523 Prasinoderma coloniale HOM05D000566 ORTHO05D008456 5.5e-22 108.6 121 48.8
TWI38G2220 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 3.6e-21 105.9 138 49.3
Glyma.04G136500 Glycine max HOM05D000566 ORTHO05D008456 1.7e-18 97.1 71 67.6
CSS0020746 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 3.8e-15 85.9 93 59.1
CSS0029795 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 3.8e-15 85.9 93 59.1
CSS0045665 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 5.0e-15 85.5 45 88.9
SEGI_06418 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 5.0e-15 85.5 96 52.1
SEGI_18524 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 1.1e-14 84.3 42 92.9
Sed0003601 Sechium edule HOM05D000566 ORTHO05D008456 2.1e-13 80.1 114 45.6
Cpa.g.sc7.61 Carica papaya HOM05D000566 ORTHO05D008456 6.7e-12 75.1 37 91.9
MBI06_g25984_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 7.7e-08 61.6 52 61.5
SEGI_34869 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 1.7e-07 60.5 42 64.3
CSS0020550 Camellia sinensis var. sinensis HOM05D052588 ORTHO05D113259 5.5e-06 55.5 29 89.7
CSS0036447 Camellia sinensis var. sinensis HOM05D052588 ORTHO05D111075 5.5e-06 55.5 29 89.7


User provided reference genes

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