Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc05g0006880 Simmondsia chinensis HOM05D004173 ORTHO05D004885 2.5e-127 458.8 223 100.0
Oeu025786.2 Olea europaea HOM05D004173 ORTHO05D004885 1.4e-29 134.0 175 40.6
Cc10_g16360 Coffea canephora HOM05D004173 ORTHO05D004885 6.9e-29 131.7 187 36.9
HPP92_012755 Vanilla planifolia HOM05D004173 ORTHO05D004885 5.8e-28 128.6 172 41.3
MBI18_g38876_MAGBIO Magnolia biondii HOM05D004173 ORTHO05D004885 2.2e-27 126.7 152 44.1
Ah.14g087000 Amaranthus hybridus HOM05D004173 ORTHO05D004885 4.9e-27 125.6 230 35.7
TAR365G1150 Trochodendron aralioides HOM05D004173 ORTHO05D004885 4.9e-27 125.6 162 42.6
TAR365G0355 Trochodendron aralioides HOM05D004173 ORTHO05D004885 1.1e-26 124.4 149 43.6
MSTRG.18054 Avicennia marina HOM05D004173 ORTHO05D004885 1.6e-25 120.6 182 36.3
CSS0041127 Camellia sinensis var. sinensis HOM05D004173 ORTHO05D004885 2.1e-25 120.2 200 36.0
CSS0049649 Camellia sinensis var. sinensis HOM05D004173 ORTHO05D004885 2.1e-25 120.2 200 36.0
PGSC0003DMG400016638 Solanum tuberosum HOM05D004173 ORTHO05D004885 5.1e-24 115.5 171 43.3
Zm00001eb215400 Zea mays HOM05D004173 ORTHO05D004885 5.1e-24 115.5 146 42.5
Aqoxy5G02899 Aquilegia oxysepala HOM05D004173 ORTHO05D004885 1.1e-23 114.4 150 40.0
PSO421G0661 Papaver somniferum HOM05D004173 ORTHO05D004885 1.9e-23 113.6 174 40.2
PSO675G3687 Papaver somniferum HOM05D004173 ORTHO05D004885 4.3e-23 112.5 172 38.4
PSO104G0082 Papaver somniferum HOM05D004173 ORTHO05D004885 1.3e-22 110.9 186 36.0
Os03g0736900 Oryza sativa ssp. japonica HOM05D004173 ORTHO05D004885 2.1e-22 110.2 151 39.7
VMungo1309G0457 Vigna mungo HOM05D004173 ORTHO05D004885 2.8e-22 109.8 209 38.3
Zm00001eb056440 Zea mays HOM05D004173 ORTHO05D004885 2.8e-22 109.8 144 42.4
Nn2g10306 Nelumbo nucifera HOM05D004173 ORTHO05D004885 6.2e-22 108.6 161 39.8
PSO063G2850 Papaver somniferum HOM05D004173 ORTHO05D004885 1.1e-21 107.8 161 39.8
Nn5g26849 Nelumbo nucifera HOM05D004173 ORTHO05D004885 1.4e-21 107.5 137 44.5
Dinv34482 Davidia involucrata HOM05D004173 ORTHO05D004885 1.8e-21 107.1 143 43.4
Phvul.009G044100 Phaseolus vulgaris HOM05D004173 ORTHO05D004885 1.8e-21 107.1 210 36.2
Solyc06g049020.1 Solanum lycopersicum HOM05D004173 ORTHO05D004885 1.8e-21 107.1 146 42.5
PSO266G0063 Papaver somniferum HOM05D004173 ORTHO05D004885 3.1e-21 106.3 153 39.9
Sopen06g015380 Solanum pennellii HOM05D004173 ORTHO05D004885 3.1e-21 106.3 146 42.5
CAN.G24.14 Capsicum annuum HOM05D004173 ORTHO05D004885 4.0e-21 105.9 145 41.4
Glyma.04G222500 Glycine max HOM05D004173 ORTHO05D004885 5.3e-21 105.5 212 35.4
Oeu063983.1 Olea europaea HOM05D004173 ORTHO05D004885 5.3e-21 105.5 161 40.4
Hma1.2p1_0264F.1_g106180 Hydrangea macrophylla HOM05D004173 ORTHO05D004885 6.9e-21 105.1 143 42.7
Lalb_Chr23g0272221 Lupinus albus HOM05D004173 ORTHO05D004885 6.9e-21 105.1 173 40.5
PSO478G3294 Papaver somniferum HOM05D004173 ORTHO05D004885 6.9e-21 105.1 158 40.5
Rhsim09G0185800 Rhododendron simsii HOM05D004173 ORTHO05D004885 1.2e-20 104.4 128 46.9
Nitab4.5_0000171g0010 Nicotiana tabacum HOM05D004173 ORTHO05D004885 3.4e-20 102.8 143 40.6
vmacro09960 Vaccinium macrocarpon HOM05D004173 ORTHO05D004885 9.9e-20 101.3 132 43.9
Glyma.06G142900 Glycine max HOM05D004173 ORTHO05D004885 1.3e-19 100.9 136 44.1
Gohir.A05G278500 Gossypium hirsutum HOM05D004173 ORTHO05D004885 1.3e-19 100.9 159 37.7
Gohir.D05G280200 Gossypium hirsutum HOM05D004173 ORTHO05D004885 1.3e-19 100.9 159 38.4
Peaxi162Scf00739g00035 Petunia axillaris HOM05D004173 ORTHO05D004885 1.3e-19 100.9 165 37.6
TPR.G1732 Trifolium pratense HOM05D004173 ORTHO05D004885 1.3e-19 100.9 192 36.5
Migut.F00606 Erythranthe guttata HOM05D004173 ORTHO05D004885 1.7e-19 100.5 160 38.1
Medtr3g093970 Medicago truncatula HOM05D004173 ORTHO05D004885 1.7e-19 100.5 163 40.5
Gorai.009G293700 Gossypium raimondii HOM05D004173 ORTHO05D004885 2.2e-19 100.1 159 37.7
CSS0045557 Camellia sinensis var. sinensis HOM05D004173 ORTHO05D004885 4.9e-19 99.0 148 41.9
MD01G1167600 Malus domestica HOM05D004173 ORTHO05D004885 4.9e-19 99.0 163 39.3
Manes.10G001300 Manihot esculenta HOM05D004173 ORTHO05D004885 6.4e-19 98.6 171 36.8
Psat5g068840 Pisum sativum HOM05D004173 ORTHO05D004885 8.4e-19 98.2 210 33.3
A10p30940 Brassica napus HOM05D004173 ORTHO05D004885 1.1e-18 97.8 186 38.2
C09p71450 Brassica napus HOM05D004173 ORTHO05D004885 1.1e-18 97.8 186 38.7
BolC9t59908H Brassica oleracea HOM05D004173 ORTHO05D004885 1.1e-18 97.8 186 38.7
BraA10t45139Z Brassica rapa HOM05D004173 ORTHO05D004885 1.1e-18 97.8 186 38.2
Manes.07G141000 Manihot esculenta HOM05D004173 ORTHO05D004885 1.4e-18 97.4 189 35.4
Thecc.10G181100 Theobroma cacao HOM05D004173 ORTHO05D004885 1.4e-18 97.4 164 37.2
Actinidia00999 Actinidia chinensis HOM05D004173 ORTHO05D004885 3.2e-18 96.3 141 41.1
Aa31LG10G11250 Aethionema arabicum HOM05D004173 ORTHO05D004885 3.2e-18 96.3 235 31.1
arahy.Tifrunner.gnm1.ann1.7F477P Arachis hypogaea HOM05D004173 ORTHO05D004885 3.2e-18 96.3 235 32.3
Ca_16866_v3 Cicer arietinum L. HOM05D004173 ORTHO05D004885 3.2e-18 96.3 225 32.4
Ca_29953_v3 Cicer arietinum L. HOM05D004173 ORTHO05D004885 3.2e-18 96.3 225 32.4
SalBow3G3840 Salvia bowleyana HOM05D004173 ORTHO05D004885 3.2e-18 96.3 155 39.4
Duzib114G0418 Durio zibethinus HOM05D004173 ORTHO05D004885 5.5e-18 95.5 162 37.7
Atru.chr12.182 Acer truncatum HOM05D004173 ORTHO05D004885 7.1e-18 95.1 224 33.5
CAN.G100.76 Capsicum annuum HOM05D004173 ORTHO05D004885 7.1e-18 95.1 165 39.4
Nitab4.5_0002279g0040 Nicotiana tabacum HOM05D004173 ORTHO05D004885 9.3e-18 94.7 156 37.2
Lalb_Chr23g0272201 Lupinus albus HOM05D004173 ORTHO05D004885 1.2e-17 94.4 193 36.8
CARHR207980 Cardamine hirsuta HOM05D004173 ORTHO05D004885 1.6e-17 94.0 150 40.7
QL08p064831 Quercus lobata HOM05D004173 ORTHO05D004885 1.6e-17 94.0 149 39.6
Manes.07G143600 Manihot esculenta HOM05D004173 ORTHO05D004885 2.1e-17 93.6 189 34.9
Peaxi162Scf00739g00036 Petunia axillaris HOM05D004173 ORTHO05D004885 2.1e-17 93.6 137 40.1
Eucgr.J00114 Eucalyptus grandis HOM05D004173 ORTHO05D004885 3.5e-17 92.8 135 41.5
Dinv21845 Davidia involucrata HOM05D004173 ORTHO05D004885 4.6e-17 92.4 130 37.7
AT5G05250 Arabidopsis thaliana HOM05D004173 ORTHO05D004885 6.0e-17 92.0 197 35.5
BcaC06g32235 Brassica carinata HOM05D004173 ORTHO05D004885 6.0e-17 92.0 178 37.1
MD07G1233600 Malus domestica HOM05D004173 ORTHO05D004885 6.0e-17 92.0 227 33.9
SGA_v2.0_scaffold60G20889 Striga asiatica HOM05D004173 ORTHO05D004885 6.0e-17 92.0 165 34.5
Ciclev10032642m.g Citrus clementina HOM05D004173 ORTHO05D004885 7.9e-17 91.7 164 36.0
Thhalv10014558m.g Eutrema salsugineum HOM05D004173 ORTHO05D004885 7.9e-17 91.7 190 34.7
Lj1g0005357 Lotus japonicus HOM05D004173 ORTHO05D004885 7.9e-17 91.7 135 40.7
AL6G15090 Arabidopsis lyrata HOM05D004173 ORTHO05D004885 1.0e-16 91.3 155 39.4
Carub.0006s0418 Capsella rubella HOM05D004173 ORTHO05D004885 1.0e-16 91.3 184 34.8
Duzib128G1795 Durio zibethinus HOM05D004173 ORTHO05D004885 1.3e-16 90.9 144 36.8
Potri.019G058000 Populus trichocarpa HOM05D004173 ORTHO05D004885 1.8e-16 90.5 150 37.3
PGSC0003DMG400011642 Solanum tuberosum HOM05D004173 ORTHO05D004885 1.8e-16 90.5 165 34.5
CARHR166510 Cardamine hirsuta HOM05D004173 ORTHO05D004885 3.0e-16 89.7 226 31.4
Sp6g37580 Schrenkiella parvula HOM05D004173 ORTHO05D004885 3.0e-16 89.7 188 35.6
CsaV3_6G002310 Cucumis sativus L. HOM05D004173 ORTHO05D004885 5.1e-16 89.0 140 36.4
RcHm_v2.0_Chr1g0372231 Rosa chinensis HOM05D004173 ORTHO05D004885 5.1e-16 89.0 196 35.2
SEGI_33270 Sequoiadendron giganteum HOM05D004173 ORTHO05D004885 5.1e-16 89.0 160 35.0
Thhalv10006215m.g Eutrema salsugineum HOM05D004173 ORTHO05D004885 6.7e-16 88.6 181 33.7
Sc10g0002990 Simmondsia chinensis HOM05D004173 ORTHO05D004885 8.7e-16 88.2 138 37.0
Cfa001210 Carpinus fangiana HOM05D004173 ORTHO05D004885 1.1e-15 87.8 139 40.3
THA.LOC104803208 Tarenaya hassleriana HOM05D004173 ORTHO05D004885 1.1e-15 87.8 216 33.3
Sed0028126 Sechium edule HOM05D004173 ORTHO05D004885 1.5e-15 87.4 162 34.0
THA.LOC104813511 Tarenaya hassleriana HOM05D004173 ORTHO05D004885 1.5e-15 87.4 174 35.1
ClCG11G005670 Citrullus lanatus HOM05D004173 ORTHO05D004885 1.9e-15 87.0 142 37.3
unitig_37.g11910 Utricularia gibba HOM05D004173 ORTHO05D004885 1.9e-15 87.0 156 35.9
Cpa.g.sc19.59 Carica papaya HOM05D004173 ORTHO05D004885 2.5e-15 86.7 213 33.3
AUR62024933 Chenopodium quinoa HOM05D004173 ORTHO05D004885 2.5e-15 86.7 157 36.9
THA.LOC104826832 Tarenaya hassleriana HOM05D004173 ORTHO05D004885 3.3e-15 86.3 169 36.1
SEGI_03811 Sequoiadendron giganteum HOM05D004173 ORTHO05D004885 4.3e-15 85.9 167 33.5
AT3G56360 Arabidopsis thaliana HOM05D004173 ORTHO05D004885 5.6e-15 85.5 223 30.9
CDE02G3998 Ceratophyllum demersum HOM05D004173 ORTHO05D004885 5.6e-15 85.5 168 33.3
AUR62030611 Chenopodium quinoa HOM05D004173 ORTHO05D004885 5.6e-15 85.5 154 37.0
THA.LOC104824365 Tarenaya hassleriana HOM05D004173 ORTHO05D004885 5.6e-15 85.5 201 32.3
AL5G37690 Arabidopsis lyrata HOM05D004173 ORTHO05D004885 7.4e-15 85.1 224 32.1
MELO3C020007.2 Cucumis melo HOM05D004173 ORTHO05D004885 7.4e-15 85.1 170 31.8
Prupe.2G264000 Prunus persica HOM05D004173 ORTHO05D004885 7.4e-15 85.1 215 34.9
A09p49310 Brassica napus HOM05D004173 ORTHO05D004885 9.6e-15 84.7 150 37.3
BraA09t40385Z Brassica rapa HOM05D004173 ORTHO05D004885 9.6e-15 84.7 150 37.3
Aa31LG11G6110 Aethionema arabicum HOM05D004173 ORTHO05D004885 1.3e-14 84.3 161 35.4
BolC8t50789H Brassica oleracea HOM05D004173 ORTHO05D004885 1.3e-14 84.3 149 36.9
Rhsim10G0215400 Rhododendron simsii HOM05D000820 ORTHO05D016785 1.6e-14 84.0 80 53.8
ATR0124G034 Amborella trichopoda HOM05D004173 ORTHO05D004885 2.1e-14 83.6 146 36.3
CDE04G1376 Ceratophyllum demersum HOM05D004173 ORTHO05D004885 2.1e-14 83.6 133 36.1
CiPaw.01G306500 Carya illinoinensis HOM05D004173 ORTHO05D004885 2.8e-14 83.2 130 39.2
Peaxi162Scf00167g01213 Petunia axillaris HOM05D004173 ORTHO05D004885 2.8e-14 83.2 138 37.7
CAN.G203.54 Capsicum annuum HOM05D004173 ORTHO05D004885 3.7e-14 82.8 171 28.7
Haze_17356 Corylus avellana HOM05D004173 ORTHO05D004885 3.7e-14 82.8 134 37.3
BcaC07g39948 Brassica carinata HOM05D004173 ORTHO05D004885 4.8e-14 82.4 148 37.8
C08p31680 Brassica napus HOM05D004173 ORTHO05D004885 4.8e-14 82.4 148 37.8
Carub.0005s2314 Capsella rubella HOM05D004173 ORTHO05D004885 4.8e-14 82.4 235 30.6
Sp5g06150 Schrenkiella parvula HOM05D004173 ORTHO05D004885 4.8e-14 82.4 171 33.9
FvH4_7g25910 Fragaria vesca HOM05D004173 ORTHO05D004885 6.2e-14 82.0 159 34.6
FAN06G1323 Fragaria x ananassa HOM05D004173 ORTHO05D004885 6.2e-14 82.0 159 34.6
Ah.12g064380 Amaranthus hybridus HOM05D004173 ORTHO05D004885 8.1e-14 81.6 158 36.1
ATR0776G079 Amborella trichopoda HOM05D004173 ORTHO05D004885 8.1e-14 81.6 146 37.7
FAN03G3439 Fragaria x ananassa HOM05D004173 ORTHO05D004885 1.1e-13 81.3 155 34.8
FAN10G3668 Fragaria x ananassa HOM05D004173 ORTHO05D004885 1.1e-13 81.3 190 31.1
BcaC07g39950 Brassica carinata HOM05D004173 ORTHO05D004885 2.4e-13 80.1 149 36.2
Gohir.A13G006500 Gossypium hirsutum HOM05D004173 ORTHO05D004885 2.4e-13 80.1 155 34.2
Gohir.D04G012400 Gossypium hirsutum HOM05D004173 ORTHO05D004885 2.4e-13 80.1 163 32.5
Gohir.D13G006700 Gossypium hirsutum HOM05D004173 ORTHO05D004885 2.4e-13 80.1 170 34.7
Gorai.013G006900 Gossypium raimondii HOM05D004173 ORTHO05D004885 4.0e-13 79.3 170 33.5
HanXRQChr08g0221561 Helianthus annuus HOM05D004173 ORTHO05D004885 4.0e-13 79.3 156 37.8
Lsat_1_v5_gn_8_11461 Lactuca sativa HOM05D004173 ORTHO05D004885 5.3e-13 79.0 186 36.0
Gorai.012G014700 Gossypium raimondii HOM05D004173 ORTHO05D004885 6.9e-13 78.6 125 36.8
TWI73G0681 Tripterygium wilfordii HOM05D004173 ORTHO05D004885 6.9e-13 78.6 157 36.9
Gohir.A05G403100 Gossypium hirsutum HOM05D004173 ORTHO05D004885 9.0e-13 78.2 125 36.0
Sopen05g030770 Solanum pennellii HOM05D004173 ORTHO05D004885 9.0e-13 78.2 153 32.0
CANSAT25G2618 Cannabis sativa HOM05D004173 ORTHO05D004885 1.2e-12 77.8 167 32.3
Dinv05055 Davidia involucrata HOM05D004173 ORTHO05D004885 2.6e-12 76.6 81 46.9
A04p03290 Brassica napus HOM05D004173 ORTHO05D004885 3.4e-12 76.3 152 34.2
BraA04t16106Z Brassica rapa HOM05D004173 ORTHO05D004885 3.4e-12 76.3 152 34.2
BcaB02g08372 Brassica carinata HOM05D004173 ORTHO05D004885 5.8e-12 75.5 153 34.0
BcaC02g09832 Brassica carinata HOM05D004173 ORTHO05D004885 5.8e-12 75.5 152 33.6
C04p36060 Brassica napus HOM05D004173 ORTHO05D004885 5.8e-12 75.5 152 33.6
EL10Ac2g02643 Beta vulgaris HOM05D004173 ORTHO05D004885 7.6e-12 75.1 123 35.8
BolC4t25192H Brassica oleracea HOM05D004173 ORTHO05D004885 1.3e-11 74.3 152 32.9
PGR044G2104 Punica granatum HOM05D004173 ORTHO05D004885 2.2e-11 73.6 152 32.2
Nitab4.5_0002846g0010 Nicotiana tabacum HOM05D004173 ORTHO05D004885 4.9e-11 72.4 121 33.9
DCAR_014665 Daucus carota HOM05D004173 ORTHO05D004885 6.5e-11 72.0 172 28.5
Pp3c14_17300 Physcomitrium patens HOM05D004173 ORTHO05D004885 8.4e-11 71.6 151 33.8
Pp3c2_14400 Physcomitrium patens HOM05D004173 ORTHO05D004885 8.4e-11 71.6 145 31.0
ECA238G3313 Erigeron canadensis HOM05D004173 ORTHO05D004885 3.2e-10 69.7 200 34.0
HanXRQChr09g0252211 Helianthus annuus HOM05D004173 ORTHO05D004885 7.9e-09 65.1 151 32.5
Lsat_1_v5_gn_9_60020 Lactuca sativa HOM05D004173 ORTHO05D004885 3.9e-08 62.8 159 32.7
Pp3c10_16350 Physcomitrium patens HOM05D004173 ORTHO05D004885 8.7e-08 61.6 144 30.6
Actinidia07794 Actinidia chinensis HOM05D004173 ORTHO05D004885 3.3e-07 59.7 88 38.6
Nitab4.5_0000375g0240 Nicotiana tabacum HOM05D004173 ORTHO05D004885 3.3e-07 59.7 92 39.1


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