Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc05g0006330 Simmondsia chinensis HOM05D049505 ORTHO05D388905 1.6e-191 672.5 331 100.0
Sc19g0004910 Simmondsia chinensis HOM05D007701 ORTHO05D006440 3.9e-12 76.6 48 77.1
Sc05g0006240 Simmondsia chinensis HOM05D001480 ORTHO05D001331 4.3e-11 73.2 128 39.1
Sc23g0004280 Simmondsia chinensis HOM05D008654 ORTHO05D010476 6.9e-09 65.9 50 68.0
MSTRG.16237 Avicennia marina HOM05D001480 ORTHO05D001331 2.9e-07 60.5 138 34.1
Nitab4.5_0009607g0020 Nicotiana tabacum HOM05D001480 ORTHO05D001331 2.9e-07 60.5 75 45.3
Solyc02g070550.3 Solanum lycopersicum HOM05D001480 ORTHO05D001331 6.4e-07 59.3 75 44.0
Sopen02g019640 Solanum pennellii HOM05D001480 ORTHO05D001331 6.4e-07 59.3 75 44.0
PGSC0003DMG400021160 Solanum tuberosum HOM05D001480 ORTHO05D001331 6.4e-07 59.3 75 44.0
AUR62030210 Chenopodium quinoa HOM05D001480 ORTHO05D001331 8.4e-07 58.9 46 60.9
Hund17807 Selenicereus undatus HOM05D001480 ORTHO05D001331 8.4e-07 58.9 39 74.4
Actinidia19521 Actinidia chinensis HOM05D001480 ORTHO05D001331 1.1e-06 58.5 128 32.8
ATR0044G025 Amborella trichopoda HOM05D001480 ORTHO05D001331 1.1e-06 58.5 169 31.4
CAN.G2602.1 Capsicum annuum HOM05D001480 ORTHO05D001331 1.1e-06 58.5 75 44.0
FvH4_3g05700 Fragaria vesca HOM05D001480 ORTHO05D001331 1.1e-06 58.5 77 42.9
FAN11G3853 Fragaria x ananassa HOM05D001480 ORTHO05D001331 1.1e-06 58.5 77 42.9
Nitab4.5_0002275g0120 Nicotiana tabacum HOM05D001480 ORTHO05D001331 1.1e-06 58.5 75 42.7
Phvul.006G164000 Phaseolus vulgaris HOM05D001480 ORTHO05D001331 1.1e-06 58.5 133 30.8
Aa31LG9G6620 Aethionema arabicum HOM05D001480 ORTHO05D001331 1.4e-06 58.2 129 32.6
FAN25G1775 Fragaria x ananassa HOM05D001480 ORTHO05D001331 1.9e-06 57.8 77 42.9
Nn3g20738 Nelumbo nucifera HOM05D001480 ORTHO05D001331 1.9e-06 57.8 138 32.6
Peaxi162Scf00214g01313 Petunia axillaris HOM05D001480 ORTHO05D001331 1.9e-06 57.8 128 33.6
Hma1.2p1_0286F.1_g114090 Hydrangea macrophylla HOM05D001480 ORTHO05D001331 2.4e-06 57.4 128 33.6
RcHm_v2.0_Chr5g0013961 Rosa chinensis HOM05D001480 ORTHO05D001331 2.4e-06 57.4 78 41.0
HPP92_009661 Vanilla planifolia HOM05D001480 ORTHO05D001331 2.4e-06 57.4 37 67.6
Dinv32265 Davidia involucrata HOM05D001480 ORTHO05D001331 3.2e-06 57.0 84 39.3
TAR626G1672 Trochodendron aralioides HOM05D001480 ORTHO05D001331 3.2e-06 57.0 128 32.8
BcaC04g21712 Brassica carinata HOM05D001480 ORTHO05D001331 5.4e-06 56.2 81 39.5
CAN.G172.9 Capsicum annuum HOM05D001480 ORTHO05D001331 5.4e-06 56.2 45 60.0
Cc09_g09470 Coffea canephora HOM05D001480 ORTHO05D001331 5.4e-06 56.2 112 33.9
Sc25g0002850 Simmondsia chinensis HOM05D049505 ORTHO05D389437 5.4e-06 56.2 138 34.1
BolC9t55713H Brassica oleracea HOM05D001480 ORTHO05D001331 7.1e-06 55.8 80 40.0
CARHR175530 Cardamine hirsuta HOM05D001480 ORTHO05D001331 7.1e-06 55.8 118 34.7
Sp2g11120 Schrenkiella parvula HOM05D001480 ORTHO05D001331 7.1e-06 55.8 118 34.7
Ah.09g232640 Amaranthus hybridus HOM05D001480 ORTHO05D001331 9.3e-06 55.5 75 41.3
C07p29490 Brassica napus HOM05D001480 ORTHO05D001331 9.3e-06 55.5 85 40.0
C09p28370 Brassica napus HOM05D001480 ORTHO05D001331 9.3e-06 55.5 81 39.5
BolC7t43498H Brassica oleracea HOM05D001480 ORTHO05D001331 9.3e-06 55.5 82 40.2
Migut.M00917 Erythranthe guttata HOM05D001480 ORTHO05D001331 9.3e-06 55.5 128 29.7
Lalb_Chr18g0055511 Lupinus albus HOM05D001480 ORTHO05D001331 9.3e-06 55.5 168 26.8
MBI10_g02214_MAGBIO Magnolia biondii HOM05D001480 ORTHO05D001331 9.3e-06 55.5 42 59.5
Prupe.4G079700 Prunus persica HOM05D001480 ORTHO05D001331 9.3e-06 55.5 129 33.3


User provided reference genes

Program Settings