Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc05g0006150 Simmondsia chinensis HOM05D013236 ORTHO05D007254 1.3e-78 296.2 141 100.0
Sc20g0000530 Simmondsia chinensis HOM05D013236 ORTHO05D007254 3.4e-18 95.5 138 37.0
Sc04g0007770 Simmondsia chinensis HOM05D013236 ORTHO05D007254 6.7e-14 81.3 106 37.7
Sc06g0010720 Simmondsia chinensis HOM05D009348 ORTHO05D015627 8.8e-14 80.9 131 34.4
Sc19g0003070 Simmondsia chinensis HOM05D013236 ORTHO05D007254 9.7e-13 77.4 89 43.8
Sc08g0007960 Simmondsia chinensis HOM05D013236 ORTHO05D015627 6.3e-12 74.7 102 42.2
CSS0012014 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.8e-11 73.2 126 36.5
Sc18g0006100 Simmondsia chinensis HOM05D013236 ORTHO05D007254 7.0e-11 71.2 80 46.2
CSS0007562 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.6e-10 70.1 113 36.3
CSS0013917 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 3.5e-10 68.9 126 34.9
Sc04g0000500 Simmondsia chinensis HOM05D000704 ORTHO05D000526 4.5e-10 68.6 93 40.9
QL09p017510 Quercus lobata HOM05D000003 ORTHO05D000004 1.7e-09 66.6 110 36.4
Sc13g0004690 Simmondsia chinensis HOM05D013236 ORTHO05D015627 6.5e-09 64.7 55 52.7
COL.COLO4_10073 Corchorus olitorius HOM05D000003 ORTHO05D000004 4.2e-08 62.0 116 34.5
CSS0000077 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 5.5e-08 61.6 126 32.5
Rhsim07G0138700 Rhododendron simsii HOM05D000003 ORTHO05D000004 9.4e-08 60.8 133 30.8
vmacro20413 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 2.1e-07 59.7 107 33.6
Lj1P1217T36 Lonicera japonica HOM05D008183 ORTHO05D007254 2.7e-07 59.3 124 32.3
COL.COLO4_28797 Corchorus olitorius HOM05D000003 ORTHO05D000004 3.6e-07 58.9 137 32.1
CSS0027326 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.7e-07 58.5 133 27.1
COL.COLO4_15583 Corchorus olitorius HOM05D000003 ORTHO05D000004 6.1e-07 58.2 132 31.8
COL.COLO4_07023 Corchorus olitorius HOM05D000003 ORTHO05D000004 8.0e-07 57.8 132 32.6
vmacro21511 Vaccinium macrocarpon HOM05D000235 ORTHO05D000147 1.0e-06 57.4 110 33.6
Lj3P1014T21 Lonicera japonica HOM05D008183 ORTHO05D007254 1.8e-06 56.6 120 29.2
Lj2C65T12 Lonicera japonica HOM05D008183 ORTHO05D007254 2.3e-06 56.2 121 28.1
Sc07g0002440 Simmondsia chinensis HOM05D013236 ORTHO05D007254 3.0e-06 55.8 79 34.2
vmacro23070 Vaccinium macrocarpon HOM05D000626 ORTHO05D007254 3.0e-06 55.8 120 31.7
EL10Ac7g16695 Beta vulgaris HOM05D000003 ORTHO05D000006 4.0e-06 55.5 134 25.4
COL.COLO4_36557 Corchorus olitorius HOM05D000003 ORTHO05D000126 8.8e-06 54.3 102 35.3
Lj2g0023892 Lotus japonicus HOM05D000003 ORTHO05D007254 8.8e-06 54.3 116 35.3
Sc13g0007780 Simmondsia chinensis HOM05D013953 ORTHO05D016376 8.8e-06 54.3 97 34.0


User provided reference genes

Program Settings