Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc05g0005670 Simmondsia chinensis HOM05D004865 ORTHO05D005949 4.0e-37 157.5 77 100.0
Sc09g0006330 Simmondsia chinensis HOM05D004865 ORTHO05D005949 2.5e-18 95.1 79 59.5
Sc17g0004370 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.0e-16 89.7 77 58.4
Sc09g0006350 Simmondsia chinensis HOM05D004865 ORTHO05D005949 2.3e-16 88.6 81 59.3
Sc06g0005920 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.1e-15 86.3 78 57.7
Sc09g0006340 Simmondsia chinensis HOM05D004865 ORTHO05D005949 4.3e-15 84.3 82 52.4
Sc09g0006530 Simmondsia chinensis HOM05D004865 ORTHO05D005949 5.7e-15 84.0 77 55.8
Sc16g0002940 Simmondsia chinensis HOM05D004865 ORTHO05D005949 7.4e-15 83.6 79 53.2
Sc22g0001740 Simmondsia chinensis HOM05D004865 ORTHO05D005949 2.8e-14 81.6 81 55.6
Sc24g0002410 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.4e-13 79.3 81 50.6
Lj3A898T31 Lonicera japonica HOM05D004865 ORTHO05D005949 1.8e-13 79.0 76 51.3
MD09G1162900 Malus domestica HOM05D004865 ORTHO05D005949 2.4e-13 78.6 76 52.6
Sc24g0002420 Simmondsia chinensis HOM05D004865 ORTHO05D005949 3.1e-13 78.2 81 50.6
MD09G1162700 Malus domestica HOM05D004865 ORTHO05D005949 9.1e-13 76.6 75 53.3
ClCG11G000680 Citrullus lanatus HOM05D004865 ORTHO05D005949 2.0e-12 75.5 76 50.0
AUR62012544 Chenopodium quinoa HOM05D004865 ORTHO05D005949 4.5e-12 74.3 80 47.5
ClCG11G000590 Citrullus lanatus HOM05D004865 ORTHO05D005949 4.5e-12 74.3 76 48.7
ClCG03G011140 Citrullus lanatus HOM05D004865 ORTHO05D005949 1.0e-11 73.2 76 47.4
Sc22g0001730 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.0e-11 73.2 81 53.1
ClCG03G011170 Citrullus lanatus HOM05D004865 ORTHO05D005949 1.3e-11 72.8 76 47.4
EL10As6g23631 Beta vulgaris HOM05D004865 ORTHO05D005949 1.7e-11 72.4 77 46.8
Hma1.2p1_0543F.1_g175180 Hydrangea macrophylla HOM05D004865 ORTHO05D005949 1.7e-11 72.4 76 46.1
Hma1.2p1_3336F.1_g335335 Hydrangea macrophylla HOM05D004865 ORTHO05D005949 1.7e-11 72.4 76 46.1
EL10As6g23632 Beta vulgaris HOM05D004865 ORTHO05D005949 2.2e-11 72.0 79 49.4
Sc02g0003580 Simmondsia chinensis HOM05D004865 ORTHO05D005949 2.9e-11 71.6 80 51.2
Sed0022242 Sechium edule HOM05D004865 ORTHO05D005949 3.8e-11 71.2 76 46.1
Sc22g0001710 Simmondsia chinensis HOM05D004865 ORTHO05D005949 5.0e-11 70.9 81 48.1
AUR62014650 Chenopodium quinoa HOM05D004865 ORTHO05D005949 8.5e-11 70.1 76 47.4
Sc22g0001760 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.1e-10 69.7 82 52.4
Actinidia05767 Actinidia chinensis HOM05D004865 ORTHO05D005949 1.4e-10 69.3 76 47.4
MD09G1163100 Malus domestica HOM05D004865 ORTHO05D005949 1.4e-10 69.3 76 46.1
MD17G1147700 Malus domestica HOM05D004865 ORTHO05D005949 1.4e-10 69.3 76 47.4
MELO3C010083.2 Cucumis melo HOM05D004865 ORTHO05D005949 3.2e-10 68.2 76 44.7
MD09G1162600 Malus domestica HOM05D004865 ORTHO05D005949 3.2e-10 68.2 75 48.0
MD05G1102400 Malus domestica HOM05D004865 ORTHO05D005949 4.2e-10 67.8 76 42.1
Prupe.2G116800 Prunus persica HOM05D004865 ORTHO05D005949 5.5e-10 67.4 76 48.7
CsaV3_1G044030 Cucumis sativus L. HOM05D004865 ORTHO05D005949 7.2e-10 67.0 76 44.7
AUR62014648 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.6e-09 65.9 91 40.7
Sc23g0005400 Simmondsia chinensis HOM05D004865 ORTHO05D005949 1.6e-09 65.9 82 43.9
Actinidia30932 Actinidia chinensis HOM05D004865 ORTHO05D005949 2.7e-09 65.1 77 46.8
AUR62014652 Chenopodium quinoa HOM05D004865 ORTHO05D005949 4.6e-09 64.3 78 43.6
AUR62044724 Chenopodium quinoa HOM05D004865 ORTHO05D005949 4.6e-09 64.3 78 43.6
Duzib052G0039 Durio zibethinus HOM05D004865 ORTHO05D005949 4.6e-09 64.3 72 48.6
Sc22g0001750 Simmondsia chinensis HOM05D004865 ORTHO05D005949 4.6e-09 64.3 81 49.4
AUR62012547 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.4e-08 62.8 58 50.0
Actinidia30931 Actinidia chinensis HOM05D004865 ORTHO05D005949 1.8e-08 62.4 77 45.5
AUR62012550 Chenopodium quinoa HOM05D004865 ORTHO05D005949 2.3e-08 62.0 56 48.2
Cre07.g321800 Chlamydomonas reinhardtii HOM05D004865 ORTHO05D005949 2.3e-08 62.0 76 43.4
Ah.06g181840 Amaranthus hybridus HOM05D004865 ORTHO05D005949 6.7e-08 60.5 76 42.1
Ah.14g087240 Amaranthus hybridus HOM05D004865 ORTHO05D005949 6.7e-08 60.5 73 38.4
Hma1.2p1_1768F.1_g301530 Hydrangea macrophylla HOM05D004865 ORTHO05D005949 1.5e-07 59.3 76 43.4
SGA_v2.0_scaffold11G05644 Striga asiatica HOM05D004865 ORTHO05D005949 1.5e-07 59.3 75 42.7
MD17G1148100 Malus domestica HOM05D004865 ORTHO05D005949 2.6e-07 58.5 77 41.6
MD17G1148200 Malus domestica HOM05D004865 ORTHO05D005949 2.6e-07 58.5 77 41.6
MD17G1148000 Malus domestica HOM05D004865 ORTHO05D005949 3.3e-07 58.2 77 42.9
CSS0027528 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 4.4e-07 57.8 76 44.7
DCAR_015955 Daucus carota HOM05D004865 ORTHO05D005949 7.4e-07 57.0 73 39.7
DCAR_016016 Daucus carota HOM05D004865 ORTHO05D005949 1.3e-06 56.2 73 41.1
CSS0032746 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 1.7e-06 55.8 76 44.7
AUR62036569 Chenopodium quinoa HOM05D004865 ORTHO05D005949 1.7e-06 55.8 73 38.4
EL10Ac8g20500 Beta vulgaris HOM05D004865 ORTHO05D005949 3.7e-06 54.7 73 41.1
AUR62031152 Chenopodium quinoa HOM05D004865 ORTHO05D005949 3.7e-06 54.7 73 37.0
CSS0005385 Camellia sinensis var. sinensis HOM05D004865 ORTHO05D005949 8.2e-06 53.5 72 41.7


User provided reference genes

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