Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc05g0005460 Simmondsia chinensis HOM05D008762 ORTHO05D030613 3.5e-100 368.2 180 100.0
Ah.12g063050 Amaranthus hybridus HOM05D000030 ORTHO05D000009 2.9e-09 66.2 98 31.6
Sc18g0000360 Simmondsia chinensis HOM05D009348 ORTHO05D030613 2.9e-09 66.2 90 36.7
Sc21g0001740 Simmondsia chinensis HOM05D011136 ORTHO05D010856 3.7e-09 65.9 92 37.0
Sc01g0000330 Simmondsia chinensis HOM05D009348 ORTHO05D010856 5.4e-08 62.0 100 33.0
Sc16g0005360 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.4e-08 62.0 83 33.7
Ah.02g117550 Amaranthus hybridus HOM05D008762 ORTHO05D011252 3.5e-07 59.3 111 29.7
Sc02g0003510 Simmondsia chinensis HOM05D009348 ORTHO05D010856 7.8e-07 58.2 97 32.0
Actinidia04023 Actinidia chinensis HOM05D012898 ORTHO05D011057 1.7e-06 57.0 106 31.1
Cfa017067 Carpinus fangiana HOM05D000428 ORTHO05D005608 2.3e-06 56.6 77 35.1
Ah.05g171570 Amaranthus hybridus HOM05D008762 ORTHO05D011252 3.9e-06 55.8 90 32.2
Cfa018514 Carpinus fangiana HOM05D000428 ORTHO05D005608 3.9e-06 55.8 79 32.9
PSO541G5970 Papaver somniferum HOM05D000428 ORTHO05D005608 5.0e-06 55.5 79 32.9
PSO675G4237 Papaver somniferum HOM05D000428 ORTHO05D005608 5.0e-06 55.5 77 33.8
SEGI_13212 Sequoiadendron giganteum HOM05D003264 ORTHO05D003276 5.0e-06 55.5 109 35.8
Actinidia12169 Actinidia chinensis HOM05D012898 ORTHO05D009356 6.6e-06 55.1 101 29.7
Ah.08g219520 Amaranthus hybridus HOM05D008762 ORTHO05D011252 8.6e-06 54.7 95 31.6
Sp3g31970 Schrenkiella parvula HOM05D000428 ORTHO05D005608 8.6e-06 54.7 90 28.9
Sc14g0002620 Simmondsia chinensis HOM05D009209 ORTHO05D011705 8.6e-06 54.7 83 28.9


User provided reference genes

Program Settings