Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc05g0004710 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.6e-192 674.1 334 100.0
Sc05g0003960 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.4e-47 192.2 196 53.6
Sc03g0005210 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.5e-43 181.0 151 57.0
Sc02g0004790 Simmondsia chinensis HOM05D007912 ORTHO05D010251 7.6e-40 168.7 129 64.3
Sc07g0004870 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.0e-36 156.8 115 66.1
Sc12g0008170 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.9e-27 127.5 100 62.0
Sc18g0005300 Simmondsia chinensis HOM05D007912 ORTHO05D010251 7.4e-27 125.6 118 53.4
Sc11g0003920 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.8e-26 123.6 238 38.7
Sc10g0007100 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.2e-22 109.8 100 53.0
Sc02g0005760 Simmondsia chinensis HOM05D007912 ORTHO05D010251 7.1e-22 109.0 307 33.6
Sc03g0004870 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.7e-21 107.1 80 63.8
Sc17g0003260 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.0e-20 105.1 123 49.6
Sc17g0003520 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.3e-20 104.0 77 74.0
Sc05g0005690 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.3e-19 100.1 119 52.1
Sc02g0004860 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.7e-19 99.4 68 67.6
Sc24g0001210 Simmondsia chinensis HOM05D007912 ORTHO05D388170 7.4e-19 99.0 75 70.7
Sc25g0003180 Simmondsia chinensis HOM05D007912 ORTHO05D388712 6.3e-18 95.9 72 69.4
Sc05g0004290 Simmondsia chinensis HOM05D007912 ORTHO05D010251 8.2e-18 95.5 86 52.3
Sc22g0004270 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.4e-17 94.7 75 61.3
Sc09g0007100 Simmondsia chinensis HOM05D007912 ORTHO05D387863 6.9e-17 92.4 78 60.3
Sc01g0005460 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.4e-16 90.1 79 62.0
Sc15g0002320 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.5e-15 85.9 77 58.4
Sc02g0004480 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.4e-14 84.7 54 75.9
Sc24g0001000 Simmondsia chinensis HOM05D003009 ORTHO05D001701 1.9e-14 84.3 176 32.4
Sc06g0004280 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.2e-14 83.6 79 57.0
Sc02g0004890 Simmondsia chinensis HOM05D007912 ORTHO05D010251 7.9e-13 79.0 59 69.5
Sabra13G0012400 Salix brachista HOM05D020966 ORTHO05D010251 3.0e-12 77.0 180 27.8
Sc17g0002860 Simmondsia chinensis HOM05D007912 ORTHO05D010251 8.7e-12 75.5 108 48.1
Sc02g0004930 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.5e-11 74.7 60 61.7
Sc26g0003020 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.8e-10 70.5 70 51.4
Sc01g0005850 Simmondsia chinensis HOM05D007912 ORTHO05D387943 5.3e-09 66.2 71 50.7
Sc02g0004160 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.9e-08 62.8 55 58.2
Sc04g0004730 Simmondsia chinensis HOM05D007912 ORTHO05D010251 7.7e-08 62.4 56 57.1
RcHm_v2.0_Chr2g0105541 Rosa chinensis HOM05D009149 ORTHO05D003639 1.1e-06 58.5 154 32.5
Sc04g0004840 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.4e-06 58.2 44 61.4
RcHm_v2.0_Chr3g0493631 Rosa chinensis HOM05D009149 ORTHO05D003639 2.5e-06 57.4 160 29.4
RcHm_v2.0_Chr4g0410321 Rosa chinensis HOM05D009149 ORTHO05D003639 2.5e-06 57.4 90 35.6
RcHm_v2.0_Chr7g0194611 Rosa chinensis HOM05D009149 ORTHO05D003639 2.5e-06 57.4 90 36.7
Sc12g0007630 Simmondsia chinensis HOM05D007912 ORTHO05D389529 2.5e-06 57.4 63 52.4
RcHm_v2.0_Chr6g0291271 Rosa chinensis HOM05D009149 ORTHO05D003639 5.5e-06 56.2 93 40.9
RcHm_v2.0_Chr2g0131351 Rosa chinensis HOM05D009149 ORTHO05D003639 9.4e-06 55.5 86 39.5


User provided reference genes

Program Settings