Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc05g0004290 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.8e-99 365.9 182 100.0
Sc03g0005210 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.9e-45 186.4 177 57.1
Sc02g0004890 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.2e-36 157.1 147 57.1
Sc22g0004270 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.0e-34 149.8 174 45.4
Sc03g0004870 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.8e-34 148.3 141 55.3
Sc18g0005300 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.7e-33 146.7 170 50.0
Sc06g0004280 Simmondsia chinensis HOM05D007912 ORTHO05D010251 8.4e-33 144.4 132 60.6
Sc04g0004730 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.3e-30 136.3 125 60.0
Sc02g0005760 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.1e-30 135.2 150 49.3
Sc07g0004870 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.3e-29 132.1 107 58.9
Sc11g0004200 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.6e-28 129.0 111 61.3
Sc10g0007100 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.1e-27 127.5 109 62.4
Sc02g0004930 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.4e-24 115.2 116 56.9
Sc02g0004480 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.1e-21 107.5 154 42.9
Sc23g0003790 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.1e-21 107.5 118 49.2
Sc02g0005270 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.6e-20 103.6 127 48.0
Sc05g0004710 Simmondsia chinensis HOM05D007912 ORTHO05D010251 8.4e-17 91.3 86 52.3
Sc12g0007100 Simmondsia chinensis HOM05D007912 ORTHO05D010251 9.3e-16 87.8 87 51.7
Sc02g0004810 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.0e-14 84.3 128 43.0
Sc11g0003920 Simmondsia chinensis HOM05D007912 ORTHO05D010251 8.7e-14 81.3 64 60.9
Sc02g0004860 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.9e-13 80.1 64 54.7
Sc17g0003150 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.3e-13 79.0 78 55.1
Sc26g0003020 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.6e-13 78.6 89 49.4
Sc12g0008170 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.3e-12 77.4 60 58.3
Sc14g0004880 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.3e-12 77.4 78 48.7
Sc01g0006550 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.6e-12 75.9 61 60.7
Sc05g0005690 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.2e-12 75.1 72 52.8
Sc17g0003520 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.2e-12 75.1 68 52.9
Sc05g0003960 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.1e-11 72.8 102 46.1
Sc17g0003130 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.0e-11 72.4 83 47.0
Sc22g0004320 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.9e-11 71.6 86 46.5
Sc02g0004970 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.0e-10 70.1 68 51.5
Sc22g0004420 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.4e-10 69.3 79 45.6
Sc01g0005460 Simmondsia chinensis HOM05D007912 ORTHO05D010251 9.9e-10 67.8 56 62.5
Sc24g0001190 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.7e-09 67.0 93 43.0
Sc03g0004300 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.2e-09 66.6 84 41.7
Sc24g0001130 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.8e-09 65.9 90 42.2
QL01p013702 Quercus lobata HOM05D009149 ORTHO05D003639 4.9e-09 65.5 155 30.3
Sc13g0007430 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.4e-09 65.1 65 52.3
Sc20g0002780 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.1e-08 64.3 80 45.0
Sabra13G0012400 Salix brachista HOM05D020966 ORTHO05D010251 1.9e-08 63.5 157 29.3
Sc15g0002320 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.4e-08 63.2 64 50.0
Sc08g0005440 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.2e-08 62.8 68 48.5
Sc14g0002490 Simmondsia chinensis HOM05D007912 ORTHO05D010251 7.1e-08 61.6 75 48.0
Sc05g0004480 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.7e-07 59.7 86 40.7
Peaxi162Scf00820g00117 Petunia axillaris HOM05D008778 ORTHO05D003639 3.5e-07 59.3 156 26.3
Sc10g0007130 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.5e-07 59.3 64 50.0
Sc01g0006690 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.6e-07 58.9 59 55.9
Sc11g0004150 Simmondsia chinensis HOM05D007912 ORTHO05D010251 7.9e-07 58.2 58 53.4
Sc06g0004250 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.3e-06 57.4 74 41.9
RcHm_v2.0_Chr4g0419521 Rosa chinensis HOM05D009149 ORTHO05D003639 2.3e-06 56.6 81 35.8
RcHm_v2.0_Chr7g0194611 Rosa chinensis HOM05D009149 ORTHO05D003639 2.3e-06 56.6 87 34.5
RcHm_v2.0_Chr3g0493631 Rosa chinensis HOM05D009149 ORTHO05D003639 3.0e-06 56.2 89 34.8
Sc07g0004510 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.1e-06 55.5 77 42.9


User provided reference genes

Program Settings