Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc05g0004270 Simmondsia chinensis HOM05D002660 ORTHO05D011807 3.8e-57 224.6 108 100.0
Actinidia11788 Actinidia chinensis HOM05D002660 ORTHO05D013121 1.4e-16 89.7 64 59.4
COL.COLO4_04088 Corchorus olitorius HOM05D002660 ORTHO05D003902 7.2e-16 87.4 70 51.4
Sed0016072 Sechium edule HOM05D002660 ORTHO05D003902 2.1e-15 85.9 69 58.0
Cfa023009 Carpinus fangiana HOM05D002660 ORTHO05D013121 2.7e-15 85.5 61 62.3
Sed0026029 Sechium edule HOM05D003467 ORTHO05D004220 5.2e-14 81.3 84 47.6
arahy.Tifrunner.gnm1.ann1.KE43QT Arachis hypogaea HOM05D002660 ORTHO05D007974 2.6e-13 79.0 70 48.6
arahy.Tifrunner.gnm1.ann1.QE4HQU Arachis hypogaea HOM05D002660 ORTHO05D007974 2.6e-13 79.0 70 48.6
CAN.G248.9 Capsicum annuum HOM05D002660 ORTHO05D003902 9.7e-13 77.0 65 49.2
Sed0005389 Sechium edule HOM05D002660 ORTHO05D013121 9.7e-13 77.0 61 57.4
Eucgr.J01097 Eucalyptus grandis HOM05D002660 ORTHO05D011807 2.2e-12 75.9 48 72.9
Actinidia34821 Actinidia chinensis HOM05D002660 ORTHO05D013121 1.8e-11 72.8 59 45.8
Nitab4.5_0009709g0040 Nicotiana tabacum HOM05D002660 ORTHO05D011807 1.6e-10 69.7 67 49.3
Lsat_1_v5_gn_8_93880 Lactuca sativa HOM05D002660 ORTHO05D013121 2.0e-10 69.3 66 47.0
Peaxi162Scf00625g00037 Petunia axillaris HOM05D002660 ORTHO05D003902 2.6e-10 68.9 69 50.7
Nitab4.5_0000172g0830 Nicotiana tabacum HOM05D002660 ORTHO05D011807 4.5e-10 68.2 67 49.3
Nitab4.5_0000172g1900 Nicotiana tabacum HOM05D002660 ORTHO05D011807 5.9e-10 67.8 67 49.3
arahy.Tifrunner.gnm1.ann1.QE2SNE Arachis hypogaea HOM05D002660 ORTHO05D013121 7.7e-10 67.4 66 42.4
SGA_v2.0_scaffold400G50959 Striga asiatica HOM05D002660 ORTHO05D003902 7.7e-10 67.4 55 52.7
Nitab4.5_0001788g0190 Nicotiana tabacum HOM05D002660 ORTHO05D011807 1.7e-09 66.2 67 49.3
Nitab4.5_0001796g0150 Nicotiana tabacum HOM05D002660 ORTHO05D011807 2.9e-09 65.5 67 46.3
Lalb_Chr00c24g0406801 Lupinus albus HOM05D002660 ORTHO05D011807 5.0e-09 64.7 68 47.1
CAN.G505.14 Capsicum annuum HOM05D000743 ORTHO05D000580 1.9e-08 62.8 71 42.3
Nitab4.5_0026598g0010 Nicotiana tabacum HOM05D002660 ORTHO05D011807 1.9e-08 62.8 60 53.3
Ca_07940_v3 Cicer arietinum L. HOM05D002660 ORTHO05D003902 3.2e-08 62.0 69 37.7
Cpa.g.sc263.18 Carica papaya HOM05D002660 ORTHO05D003902 4.2e-08 61.6 47 59.6
Ca_08791_v3 Cicer arietinum L. HOM05D002660 ORTHO05D003902 5.5e-08 61.2 70 35.7
Medtr0212s0050 Medicago truncatula HOM05D002660 ORTHO05D003902 9.4e-08 60.5 70 35.7
Ca_22174_v3 Cicer arietinum L. HOM05D002660 ORTHO05D003902 1.6e-07 59.7 67 37.3
Nitab4.5_0000592g0110 Nicotiana tabacum HOM05D002660 ORTHO05D011807 1.6e-07 59.7 58 51.7
Nitab4.5_0027526g0010 Nicotiana tabacum HOM05D002660 ORTHO05D011807 8.0e-07 57.4 58 51.7
CAN.G950.7 Capsicum annuum HOM05D002660 ORTHO05D003902 1.0e-06 57.0 34 61.8
Ca_22165_v3 Cicer arietinum L. HOM05D001560 ORTHO05D003613 1.8e-06 56.2 49 42.9
SGA_v2.0_scaffold245G44665 Striga asiatica HOM05D002660 ORTHO05D011807 1.8e-06 56.2 43 48.8
Ca_26184_v3 Cicer arietinum L. HOM05D002660 ORTHO05D003902 2.3e-06 55.8 70 31.4
ATR0502G001 Amborella trichopoda HOM05D002660 ORTHO05D003902 6.7e-06 54.3 59 33.9
CAN.G70.3 Capsicum annuum HOM05D002660 ORTHO05D003902 6.7e-06 54.3 38 55.3


User provided reference genes

Program Settings