Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc05g0004190 Simmondsia chinensis HOM05D006806 ORTHO05D008448 1.1e-89 333.2 162 100.0
Manes.05G063800 Manihot esculenta HOM05D006806 ORTHO05D008448 1.2e-46 190.3 156 59.0
Haze_04900 Corylus avellana HOM05D006806 ORTHO05D008448 1.6e-43 179.9 156 57.1
TAR365G0408 Trochodendron aralioides HOM05D006806 ORTHO05D008448 1.6e-43 179.9 157 61.1
Actinidia24336 Actinidia chinensis HOM05D006806 ORTHO05D008448 7.9e-43 177.6 159 57.9
Nn3g21440 Nelumbo nucifera HOM05D006806 ORTHO05D008448 1.8e-42 176.4 155 58.7
CSS0020680 Camellia sinensis var. sinensis HOM05D006806 ORTHO05D008448 3.0e-42 175.6 163 55.8
GSVIVG01027979001 Vitis vinifera HOM05D006806 ORTHO05D008448 5.1e-42 174.9 155 57.4
Cfa005945 Carpinus fangiana HOM05D006806 ORTHO05D008448 1.1e-41 173.7 155 56.1
Thecc.01G297500 Theobroma cacao HOM05D006806 ORTHO05D008448 2.5e-41 172.6 154 57.8
Atru.chr5.1178 Acer truncatum HOM05D006806 ORTHO05D008448 9.7e-41 170.6 154 55.2
Duzib133G0508 Durio zibethinus HOM05D006806 ORTHO05D008448 1.3e-40 170.2 153 56.9
COL.COLO4_23371 Corchorus olitorius HOM05D006806 ORTHO05D008448 1.7e-40 169.9 154 55.2
Ciclev10021759m.g Citrus clementina HOM05D006806 ORTHO05D008448 2.2e-40 169.5 161 54.0
Rhsim13G0012300 Rhododendron simsii HOM05D006806 ORTHO05D008448 6.3e-40 167.9 156 54.5
Gohir.D12G011300 Gossypium hirsutum HOM05D006806 ORTHO05D008448 1.1e-39 167.2 154 54.5
Gorai.008G011300 Gossypium raimondii HOM05D006806 ORTHO05D008448 1.1e-39 167.2 154 54.5
vmacro02466 Vaccinium macrocarpon HOM05D006806 ORTHO05D008448 1.1e-39 167.2 160 54.4
Sabra14G0097600 Salix brachista HOM05D006806 ORTHO05D008448 3.1e-39 165.6 156 55.1
Hma1.2p1_0209F.1_g088560 Hydrangea macrophylla HOM05D006806 ORTHO05D008448 4.1e-39 165.2 163 55.2
Potri.014G131200 Populus trichocarpa HOM05D006806 ORTHO05D008448 2.6e-38 162.5 151 57.6
ClCG10G010640 Citrullus lanatus HOM05D006806 ORTHO05D008448 5.9e-38 161.4 154 51.3
TWI59G0641 Tripterygium wilfordii HOM05D006806 ORTHO05D008448 3.8e-37 158.7 159 52.2
CiPaw.07G106700 Carya illinoinensis HOM05D006806 ORTHO05D008448 1.4e-36 156.8 119 60.5
MELO3C017969.2 Cucumis melo HOM05D006806 ORTHO05D008448 9.4e-36 154.1 154 50.6
AUR62008620 Chenopodium quinoa HOM05D006806 ORTHO05D008448 2.1e-35 152.9 172 52.3
THA.LOC104801266 Tarenaya hassleriana HOM05D006806 ORTHO05D008448 2.7e-35 152.5 153 53.6
FvH4_2g25440 Fragaria vesca HOM05D006806 ORTHO05D008448 3.6e-35 152.1 149 53.7
CsaV3_4G000670 Cucumis sativus L. HOM05D006806 ORTHO05D008448 4.7e-35 151.8 155 49.7
Solyc09g074920.3 Solanum lycopersicum HOM05D006806 ORTHO05D008448 4.7e-35 151.8 162 50.0
Aqoxy5G00723 Aquilegia oxysepala HOM05D006806 ORTHO05D008448 6.1e-35 151.4 157 51.0
AUR62033171 Chenopodium quinoa HOM05D006806 ORTHO05D008448 6.1e-35 151.4 153 52.3
QL12p027175 Quercus lobata HOM05D006806 ORTHO05D008448 6.1e-35 151.4 152 52.0
Oeu046692.2 Olea europaea HOM05D006806 ORTHO05D008448 7.9e-35 151.0 152 56.6
Sopen09g029740 Solanum pennellii HOM05D006806 ORTHO05D008448 7.9e-35 151.0 162 50.0
ATR0796G300 Amborella trichopoda HOM05D006806 ORTHO05D008448 1.4e-34 150.2 158 51.3
DCAR_002818 Daucus carota HOM05D006806 ORTHO05D008448 1.4e-34 150.2 154 48.7
FAN27G1603 Fragaria x ananassa HOM05D006806 ORTHO05D008448 1.4e-34 150.2 150 53.3
Prupe.8G258600 Prunus persica HOM05D006806 ORTHO05D008448 2.3e-34 149.4 154 54.5
FAN20G0869 Fragaria x ananassa HOM05D006806 ORTHO05D008448 3.0e-34 149.1 150 53.3
Peaxi162Scf00067g02523 Petunia axillaris HOM05D006806 ORTHO05D008448 5.1e-34 148.3 160 50.6
CANSAT25G0048 Cannabis sativa HOM05D006806 ORTHO05D008448 6.7e-34 147.9 156 50.0
CAN.G339.30 Capsicum annuum HOM05D006806 ORTHO05D008448 6.7e-34 147.9 164 47.6
FAN15G0699 Fragaria x ananassa HOM05D006806 ORTHO05D008448 8.8e-34 147.5 149 51.7
AL6G50560 Arabidopsis lyrata HOM05D006806 ORTHO05D008448 1.1e-33 147.1 154 53.2
Lj1C32T0 Lonicera japonica HOM05D006806 ORTHO05D008448 1.1e-33 147.1 189 45.0
CANSAT25G1656 Cannabis sativa HOM05D006806 ORTHO05D008448 1.5e-33 146.7 156 50.0
FAN24G3039 Fragaria x ananassa HOM05D006806 ORTHO05D008448 3.3e-33 145.6 150 52.7
MD11G1304900 Malus domestica HOM05D006806 ORTHO05D008448 3.3e-33 145.6 153 54.2
MSTRG.21623 Avicennia marina HOM05D006806 ORTHO05D008448 4.4e-33 145.2 157 47.1
PGR119G2452 Punica granatum HOM05D006806 ORTHO05D008448 4.4e-33 145.2 164 51.8
EL10Ac7g17440 Beta vulgaris HOM05D006806 ORTHO05D008448 5.7e-33 144.8 203 42.4
Nitab4.5_0003901g0060 Nicotiana tabacum HOM05D006806 ORTHO05D008448 5.7e-33 144.8 162 48.1
Carub.0006s3464 Capsella rubella HOM05D006806 ORTHO05D008448 7.4e-33 144.4 155 52.3
FAN15G1766 Fragaria x ananassa HOM05D006806 ORTHO05D008448 2.2e-32 142.9 158 50.6
Lsat_1_v5_gn_9_1100 Lactuca sativa HOM05D006806 ORTHO05D008448 2.8e-32 142.5 159 49.7
SalBow3G1555 Salvia bowleyana HOM05D006806 ORTHO05D008448 2.8e-32 142.5 163 44.8
Cpa.g.sc9.212 Carica papaya HOM05D006806 ORTHO05D008448 6.3e-32 141.4 165 47.3
Thhalv10028943m.g Eutrema salsugineum HOM05D006806 ORTHO05D008448 6.3e-32 141.4 159 49.1
Hund05413 Selenicereus undatus HOM05D006806 ORTHO05D008448 1.8e-31 139.8 217 41.5
Nitab4.5_0000619g0080 Nicotiana tabacum HOM05D006806 ORTHO05D008448 2.4e-31 139.4 164 47.0
RcHm_v2.0_Chr6g0293671 Rosa chinensis HOM05D006806 ORTHO05D008448 2.4e-31 139.4 155 49.7
PGR119G0665 Punica granatum HOM05D006806 ORTHO05D008448 4.1e-31 138.7 158 51.3
Sp6g02400 Schrenkiella parvula HOM05D006806 ORTHO05D008448 5.3e-31 138.3 157 49.0
BcaB01g02036 Brassica carinata HOM05D006806 ORTHO05D008448 1.2e-30 137.1 155 51.6
BraA09t35844Z Brassica rapa HOM05D006806 ORTHO05D008448 1.6e-30 136.7 153 48.4
SGA_v2.0_scaffold1G00377 Striga asiatica HOM05D000802 ORTHO05D001074 2.0e-30 136.3 151 47.0
A09p01940 Brassica napus HOM05D006806 ORTHO05D008448 2.6e-30 136.0 153 48.4
ECA247G0015 Erigeron canadensis HOM05D006806 ORTHO05D008448 4.5e-30 135.2 115 56.5
Eucgr.H01159 Eucalyptus grandis HOM05D006806 ORTHO05D008448 4.5e-30 135.2 164 47.0
HanXRQChr15g0465711 Helianthus annuus HOM05D006806 ORTHO05D008448 4.5e-30 135.2 162 47.5
AT4G02485 Arabidopsis thaliana HOM05D006806 ORTHO05D008448 7.7e-30 134.4 154 50.0
BcaNung04058 Brassica carinata HOM05D006806 ORTHO05D008448 1.3e-29 133.7 155 48.4
BolC9t53133H Brassica oleracea HOM05D006806 ORTHO05D008448 1.3e-29 133.7 155 48.4
C09p02030 Brassica napus HOM05D006806 ORTHO05D008448 2.5e-28 129.4 153 49.7
Lalb_Chr21g0312551 Lupinus albus HOM05D006806 ORTHO05D008448 2.5e-28 129.4 152 48.7
Migut.D00198 Erythranthe guttata HOM05D006806 ORTHO05D008448 7.2e-28 127.9 165 44.8
SEGI_33486 Sequoiadendron giganteum HOM05D006806 ORTHO05D008448 9.4e-28 127.5 153 41.8
Zm00001eb115680 Zea mays HOM05D006806 ORTHO05D008448 4.7e-27 125.2 156 44.2
Os11g0657200 Oryza sativa ssp. japonica HOM05D006806 ORTHO05D008448 6.1e-27 124.8 147 45.6
BcaNung04061 Brassica carinata HOM05D000714 ORTHO05D008448 6.7e-26 121.3 121 52.9
CDE02G3512 Ceratophyllum demersum HOM05D006806 ORTHO05D008448 1.5e-25 120.2 137 46.0
Ca_06294_v3 Cicer arietinum L. HOM05D006806 ORTHO05D008448 1.5e-25 120.2 151 47.7
Aa31LG5G2120 Aethionema arabicum HOM05D006806 ORTHO05D008448 2.6e-25 119.4 216 37.0
Lj1A1G13 Lonicera japonica HOM05D006806 ORTHO05D008448 1.7e-24 116.7 205 37.6
HPP92_014223 Vanilla planifolia HOM05D006806 ORTHO05D008448 2.8e-24 115.9 150 44.7
AagrBONN_evm.TU.Sc2ySwM_117.167 Anthoceros agrestis HOM05D006806 ORTHO05D008448 4.8e-24 115.2 151 43.0
Psat2g014480 Pisum sativum HOM05D006806 ORTHO05D008448 1.4e-23 113.6 117 51.3
HPP92_026483 Vanilla planifolia HOM05D006806 ORTHO05D008448 1.4e-23 113.6 151 43.7
Medtr5g091920 Medicago truncatula HOM05D006806 ORTHO05D008448 2.4e-23 112.8 154 43.5
Glyma.14G026500 Glycine max HOM05D006806 ORTHO05D008448 1.2e-22 110.5 155 42.6
Phvul.008G264300 Phaseolus vulgaris HOM05D006806 ORTHO05D008448 2.7e-22 109.4 155 40.6
PGSC0003DMG400011394 Solanum tuberosum HOM05D006806 ORTHO05D008448 7.7e-22 107.8 154 41.6
Mapoly0003s0075 Marchantia polymorpha HOM05D006806 ORTHO05D008448 2.2e-21 106.3 154 38.3
VMungo0647G0123 Vigna mungo HOM05D006806 ORTHO05D008448 2.9e-21 105.9 155 38.1
Pp3c19_16790 Physcomitrium patens HOM05D006806 ORTHO05D008448 2.5e-20 102.8 111 43.2
SMO364G0875 Selaginella moellendorffii HOM05D006806 ORTHO05D008448 2.5e-20 102.8 158 40.5
MBI19_g29223_MAGBIO Magnolia biondii HOM05D006806 ORTHO05D008448 1.8e-18 96.7 83 62.7
Cc01_g20670 Coffea canephora HOM05D006806 ORTHO05D008448 8.8e-18 94.4 80 57.5
arahy.Tifrunner.gnm1.ann1.IELT58 Arachis hypogaea HOM05D006806 ORTHO05D008448 1.5e-17 93.6 112 45.5
arahy.Tifrunner.gnm1.ann1.68R93N Arachis hypogaea HOM05D006806 ORTHO05D008448 2.0e-17 93.2 112 45.5
CARHR250790 Cardamine hirsuta HOM05D006806 ORTHO05D008448 2.2e-16 89.7 79 57.0
BcaB02g10829 Brassica carinata HOM05D006806 ORTHO05D008448 3.7e-16 89.0 161 37.9
Dinv19713 Davidia involucrata HOM05D006806 ORTHO05D008448 6.3e-16 88.2 71 59.2
LjContig00310g0013469 Lotus japonicus HOM05D006806 ORTHO05D008448 6.3e-16 88.2 150 37.3
Gohir.A12G010900 Gossypium hirsutum HOM05D006806 ORTHO05D008448 3.1e-15 85.9 98 48.0
Sed0021826 Sechium edule HOM05D006806 ORTHO05D008448 4.5e-14 82.0 100 45.0
Hma1.2p1_0209F.1_g088570 Hydrangea macrophylla HOM05D006806 ORTHO05D008448 2.9e-13 79.3 68 60.3
MBI19_g29222_MAGBIO Magnolia biondii HOM05D006806 ORTHO05D008448 4.2e-12 75.5 75 53.3
BcaNung04059 Brassica carinata HOM05D006806 ORTHO05D008448 1.3e-08 63.9 81 40.7
Cc01_g20680 Coffea canephora HOM05D006806 ORTHO05D008448 3.7e-08 62.4 74 47.3
Duzib116G0666 Durio zibethinus HOM05D006806 ORTHO05D008448 4.9e-08 62.0 70 50.0


User provided reference genes

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