Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc05g0002820 Simmondsia chinensis HOM05D006210 ORTHO05D007510 1.1e-87 326.6 167 100.0
Sc05g0002800 Simmondsia chinensis HOM05D006210 ORTHO05D007510 1.9e-47 193.0 246 51.6
Hund18317 Selenicereus undatus HOM05D006210 ORTHO05D007510 1.1e-28 130.6 109 59.6
AUR62025420 Chenopodium quinoa HOM05D006210 ORTHO05D007510 4.8e-27 125.2 107 57.0
Actinidia30115 Actinidia chinensis HOM05D006210 ORTHO05D007510 6.3e-27 124.8 107 57.0
Actinidia37561 Actinidia chinensis HOM05D006210 ORTHO05D007510 8.2e-27 124.4 165 47.3
CSS0033273 Camellia sinensis var. sinensis HOM05D006210 ORTHO05D007510 4.1e-26 122.1 110 56.4
AUR62008821 Chenopodium quinoa HOM05D006210 ORTHO05D007510 5.3e-26 121.7 102 59.8
Ciclev10020743m.g Citrus clementina HOM05D006210 ORTHO05D007510 7.7e-25 117.9 94 62.8
Prupe.1G573100 Prunus persica HOM05D006210 ORTHO05D007510 2.2e-24 116.3 105 57.1
MD10G1174200 Malus domestica HOM05D006210 ORTHO05D007510 2.5e-23 112.8 104 57.7
Gohir.A11G134300 Gossypium hirsutum HOM05D006210 ORTHO05D007510 3.2e-23 112.5 102 56.9
QL09p042418 Quercus lobata HOM05D006210 ORTHO05D007510 3.2e-23 112.5 105 58.1
COL.COLO4_37372 Corchorus olitorius HOM05D006210 ORTHO05D007510 5.5e-23 111.7 107 56.1
CsaV3_3G028470 Cucumis sativus L. HOM05D006210 ORTHO05D007510 5.5e-23 111.7 102 54.9
Manes.13G038600 Manihot esculenta HOM05D006210 ORTHO05D007510 7.2e-23 111.3 101 56.4
TWI18G1043 Tripterygium wilfordii HOM05D006210 ORTHO05D007510 7.2e-23 111.3 89 61.8
Sc05g0002580 Simmondsia chinensis HOM05D006210 ORTHO05D007510 9.4e-23 110.9 108 56.5
Haze_24722 Corylus avellana HOM05D006210 ORTHO05D007510 1.2e-22 110.5 117 53.8
Thecc.01G247800 Theobroma cacao HOM05D006210 ORTHO05D007510 1.2e-22 110.5 104 55.8
Duzib138G0227 Durio zibethinus HOM05D006210 ORTHO05D007510 1.6e-22 110.2 100 55.0
Gohir.D11G140400 Gossypium hirsutum HOM05D006210 ORTHO05D007510 1.6e-22 110.2 102 55.9
Cpa.g.sc87.54 Carica papaya HOM05D006210 ORTHO05D007510 2.1e-22 109.8 97 59.8
CiPaw.03G272200 Carya illinoinensis HOM05D006210 ORTHO05D007510 2.1e-22 109.8 105 56.2
Cfa002496 Carpinus fangiana HOM05D006210 ORTHO05D007510 2.7e-22 109.4 105 55.2
Atru.chr5.2084_Atru.chr5.2085 Acer truncatum HOM05D006210 ORTHO05D007510 3.6e-22 109.0 104 56.7
MELO3C012833.2 Cucumis melo HOM05D006210 ORTHO05D007510 3.6e-22 109.0 104 53.8
Lj1C76G7 Lonicera japonica HOM05D006210 ORTHO05D007510 3.6e-22 109.0 102 53.9
Prupe.8G213100 Prunus persica HOM05D006210 ORTHO05D007510 4.7e-22 108.6 92 60.9
ClCG07G001460 Citrullus lanatus HOM05D006210 ORTHO05D007510 8.0e-22 107.8 94 60.6
Glyma.13G127800 Glycine max HOM05D006210 ORTHO05D007510 1.0e-21 107.5 100 54.0
HanXRQChr10g0280241 Helianthus annuus HOM05D006210 ORTHO05D007510 2.3e-21 106.3 106 52.8
VMungo0720G2771 Vigna mungo HOM05D006210 ORTHO05D007510 2.3e-21 106.3 100 54.0
vmacro02716 Vaccinium macrocarpon HOM05D006210 ORTHO05D007510 3.0e-21 105.9 102 57.8
GSVIVG01028451001 Vitis vinifera HOM05D006210 ORTHO05D007510 3.0e-21 105.9 104 53.8
Ah.15g091520 Amaranthus hybridus HOM05D006210 ORTHO05D007510 5.2e-21 105.1 104 51.9
Phvul.007G154100 Phaseolus vulgaris HOM05D006210 ORTHO05D007510 6.7e-21 104.8 100 52.0
Sed0025577 Sechium edule HOM05D006210 ORTHO05D007510 6.7e-21 104.8 104 51.9
Potri.002G255300 Populus trichocarpa HOM05D006210 ORTHO05D007510 1.1e-20 104.0 102 54.9
PSO210G7683 Papaver somniferum HOM05D006210 ORTHO05D007510 1.5e-20 103.6 101 54.5
RcHm_v2.0_Chr6g0286031 Rosa chinensis HOM05D006210 ORTHO05D007510 2.6e-20 102.8 92 59.8
PSO170G6901 Papaver somniferum HOM05D006210 ORTHO05D007510 4.4e-20 102.1 101 53.5
BraA09t42139Z Brassica rapa HOM05D006210 ORTHO05D007510 5.7e-20 101.7 102 50.0
ECA247G1810 Erigeron canadensis HOM05D006210 ORTHO05D007510 5.7e-20 101.7 104 51.9
DCAR_000556 Daucus carota HOM05D006210 ORTHO05D007510 7.4e-20 101.3 95 56.8
Thhalv10008004m.g Eutrema salsugineum HOM05D006210 ORTHO05D007510 7.4e-20 101.3 95 54.7
FvH4_2g20260 Fragaria vesca HOM05D006210 ORTHO05D007510 9.7e-20 100.9 104 52.9
Hma1.2p1_2051F.1_g312580 Hydrangea macrophylla HOM05D006210 ORTHO05D007510 1.3e-19 100.5 105 57.1
TPR.G28794 Trifolium pratense HOM05D006210 ORTHO05D007510 2.2e-19 99.8 90 56.7
ATR0723G059 Amborella trichopoda HOM05D006210 ORTHO05D007510 2.8e-19 99.4 94 50.0
BolC8t52775H Brassica oleracea HOM05D006210 ORTHO05D007510 2.8e-19 99.4 105 49.5
FAN27G1100 Fragaria x ananassa HOM05D006210 ORTHO05D007510 2.8e-19 99.4 93 55.9
Rhsim13G0040700 Rhododendron simsii HOM05D006210 ORTHO05D007510 2.8e-19 99.4 108 48.1
Glyma.10G040900 Glycine max HOM05D006210 ORTHO05D007510 3.7e-19 99.0 100 50.0
Oeu058104.1 Olea europaea HOM05D006210 ORTHO05D007510 3.7e-19 99.0 100 50.0
Psat6g064440 Pisum sativum HOM05D006210 ORTHO05D007510 3.7e-19 99.0 95 54.7
C08p52480 Brassica napus HOM05D006210 ORTHO05D007510 4.8e-19 98.6 102 49.0
Sp1g02950 Schrenkiella parvula HOM05D006210 ORTHO05D007510 4.8e-19 98.6 105 49.5
Ca_09640_v3 Cicer arietinum L. HOM05D006210 ORTHO05D007510 6.3e-19 98.2 102 52.9
BcaC07g42211 Brassica carinata HOM05D006210 ORTHO05D007510 1.1e-18 97.4 105 49.5
A09p68040 Brassica napus HOM05D006210 ORTHO05D007510 1.4e-18 97.1 105 48.6
Eucgr.A01369 Eucalyptus grandis HOM05D006210 ORTHO05D007510 1.4e-18 97.1 104 48.1
AT1G04130 Arabidopsis thaliana HOM05D006210 ORTHO05D007510 1.8e-18 96.7 100 48.0
Lj5g0001397 Lotus japonicus HOM05D006210 ORTHO05D007510 4.1e-18 95.5 89 55.1
Aqoxy5G00102 Aquilegia oxysepala HOM05D006210 ORTHO05D007510 5.3e-18 95.1 91 47.3
SalBow5G1930 Salvia bowleyana HOM05D006210 ORTHO05D007510 5.3e-18 95.1 101 46.5
BcaC07g42208 Brassica carinata HOM05D006210 ORTHO05D007510 7.0e-18 94.7 105 47.6
Sopen09g025510 Solanum pennellii HOM05D006210 ORTHO05D007510 7.0e-18 94.7 103 46.6
PGR031G0293 Punica granatum HOM05D006210 ORTHO05D007510 1.6e-17 93.6 102 48.0
Lalb_Chr21g0314151 Lupinus albus HOM05D006210 ORTHO05D007510 2.0e-17 93.2 100 48.0
Peaxi162Scf00043g00235 Petunia axillaris HOM05D006210 ORTHO05D007510 2.0e-17 93.2 94 52.1
AL1G13730 Arabidopsis lyrata HOM05D006210 ORTHO05D007510 2.6e-17 92.8 100 46.0
THA.LOC104801120 Tarenaya hassleriana HOM05D006210 ORTHO05D007510 3.5e-17 92.4 100 49.0
arahy.Tifrunner.gnm1.ann1.6WB007 Arachis hypogaea HOM05D006210 ORTHO05D007510 4.5e-17 92.0 100 48.0
MBI10_g26060_MAGBIO Magnolia biondii HOM05D006210 ORTHO05D007510 5.9e-17 91.7 93 50.5
Aa31LG1G20710 Aethionema arabicum HOM05D006210 ORTHO05D007510 7.7e-17 91.3 102 48.0
Carub.0001s0328 Capsella rubella HOM05D006210 ORTHO05D007510 1.3e-16 90.5 100 46.0
Sabra02G0194000 Salix brachista HOM05D006210 ORTHO05D007510 1.3e-16 90.5 157 40.8
CARHR003480 Cardamine hirsuta HOM05D006210 ORTHO05D007510 1.7e-16 90.1 100 44.0
SGA_v2.0_scaffold382G50403 Striga asiatica HOM05D006210 ORTHO05D007510 1.7e-16 90.1 102 46.1
Nitab4.5_0000385g0060 Nicotiana tabacum HOM05D006210 ORTHO05D007510 5.0e-16 88.6 94 48.9
MSTRG.22887 Avicennia marina HOM05D006210 ORTHO05D007510 6.5e-16 88.2 101 46.5
CAN.G119.6 Capsicum annuum HOM05D006210 ORTHO05D007510 6.5e-16 88.2 94 50.0
PGSC0003DMG400007719 Solanum tuberosum HOM05D006210 ORTHO05D007510 6.5e-16 88.2 94 47.9
Nn1g03023 Nelumbo nucifera HOM05D006210 ORTHO05D007510 8.5e-16 87.8 100 45.0
CANSAT01G0995 Cannabis sativa HOM05D006210 ORTHO05D007510 9.4e-15 84.3 105 46.7
TAR362G1053 Trochodendron aralioides HOM05D006210 ORTHO05D007510 2.1e-14 83.2 104 42.3
unitig_22.g6263 Utricularia gibba HOM05D006210 ORTHO05D007510 2.3e-13 79.7 89 46.1
Cc01_g17680 Coffea canephora HOM05D006210 ORTHO05D007510 5.2e-13 78.6 93 45.2
Migut.O00355 Erythranthe guttata HOM05D006210 ORTHO05D007510 8.8e-13 77.8 100 37.0
SEGI_04783 Sequoiadendron giganteum HOM05D006210 ORTHO05D007510 2.0e-12 76.6 104 40.4
Sc05g0002640 Simmondsia chinensis HOM05D006210 ORTHO05D007510 1.3e-11 73.9 68 67.6
HPP92_025825 Vanilla planifolia HOM05D006210 ORTHO05D007510 1.7e-11 73.6 91 44.0
ClCG00G001600 Citrullus lanatus HOM05D006210 ORTHO05D007510 2.2e-11 73.2 81 53.1
Dinv43053 Davidia involucrata HOM05D006210 ORTHO05D007510 2.2e-11 73.2 70 61.4
Os03g0750100 Oryza sativa ssp. japonica HOM05D006210 ORTHO05D007510 6.3e-11 71.6 102 41.2
Zm00001eb057360 Zea mays HOM05D006210 ORTHO05D007510 2.4e-10 69.7 101 38.6
SEGI_25119 Sequoiadendron giganteum HOM05D006210 ORTHO05D007510 9.1e-10 67.8 51 58.8
Mapoly0012s0146 Marchantia polymorpha HOM05D006210 ORTHO05D007510 7.2e-07 58.2 90 41.1
Nitab4.5_0000392g0100 Nicotiana tabacum HOM05D006210 ORTHO05D007510 9.4e-07 57.8 71 45.1


User provided reference genes

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