Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc05g0001890 Simmondsia chinensis HOM05D005755 ORTHO05D007006 7.3e-56 220.3 111 100.0
Hund18453 Selenicereus undatus HOM05D005755 ORTHO05D007006 1.2e-45 186.4 111 83.8
AUR62004768 Chenopodium quinoa HOM05D005755 ORTHO05D007006 2.9e-44 181.8 109 82.6
EL10Ac7g15953 Beta vulgaris HOM05D005755 ORTHO05D007006 3.8e-44 181.4 109 82.6
Ah.04g160050 Amaranthus hybridus HOM05D005755 ORTHO05D007006 2.4e-43 178.7 106 84.0
AUR62037483 Chenopodium quinoa HOM05D005755 ORTHO05D007006 3.2e-43 178.3 109 83.5
EL10Ac3g06003 Beta vulgaris HOM05D005755 ORTHO05D007006 7.1e-43 177.2 109 79.8
GSVIVG01016339001 Vitis vinifera HOM05D005755 ORTHO05D007006 1.6e-42 176.0 111 80.2
Thecc.10G068000 Theobroma cacao HOM05D005755 ORTHO05D007006 1.3e-41 172.9 108 76.9
EL10Ac6g13227 Beta vulgaris HOM05D005755 ORTHO05D007006 1.7e-41 172.6 109 77.1
Nn5g30302 Nelumbo nucifera HOM05D005755 ORTHO05D007006 1.7e-41 172.6 111 75.7
TAR381G1573 Trochodendron aralioides HOM05D005755 ORTHO05D007006 3.9e-41 171.4 111 74.8
Manes.10G042600 Manihot esculenta HOM05D005755 ORTHO05D007006 5.1e-41 171.0 109 77.1
Dinv04676 Davidia involucrata HOM05D005755 ORTHO05D007006 8.7e-41 170.2 112 75.9
Eucgr.G02800 Eucalyptus grandis HOM05D005755 ORTHO05D007006 8.7e-41 170.2 111 73.9
Ciclev10033129m.g Citrus clementina HOM05D005755 ORTHO05D007006 2.5e-40 168.7 111 73.9
vmacro04890 Vaccinium macrocarpon HOM05D005755 ORTHO05D007006 4.3e-40 167.9 114 73.7
Cpa.g.sc53.20 Carica papaya HOM05D005755 ORTHO05D007006 5.6e-40 167.5 103 78.6
Duzib106G1131 Durio zibethinus HOM05D005755 ORTHO05D007006 5.6e-40 167.5 112 75.0
Dinv11808 Davidia involucrata HOM05D005755 ORTHO05D007006 7.3e-40 167.2 112 75.0
EL10Ac7g17935 Beta vulgaris HOM05D005755 ORTHO05D007006 1.3e-39 166.4 99 83.8
DCAR_015273 Daucus carota HOM05D005755 ORTHO05D007006 1.6e-39 166.0 109 75.2
Duzib114G0063 Durio zibethinus HOM05D005755 ORTHO05D007006 1.6e-39 166.0 102 78.4
FAN10G3796 Fragaria x ananassa HOM05D005755 ORTHO05D007006 1.6e-39 166.0 111 73.0
Prupe.2G218600 Prunus persica HOM05D005755 ORTHO05D007006 2.1e-39 165.6 111 71.2
RcHm_v2.0_Chr1g0364121 Rosa chinensis HOM05D005755 ORTHO05D007006 2.8e-39 165.2 111 73.0
CiPaw.15G145100 Carya illinoinensis HOM05D005755 ORTHO05D007006 3.6e-39 164.9 111 75.7
FvH4_7g20160 Fragaria vesca HOM05D005755 ORTHO05D007006 8.1e-39 163.7 111 72.1
Atru.chr12.636 Acer truncatum HOM05D005755 ORTHO05D007006 1.1e-38 163.3 109 73.4
Ca_19066_v3 Cicer arietinum L. HOM05D005755 ORTHO05D007006 1.1e-38 163.3 109 72.5
MD07G1179300 Malus domestica HOM05D005755 ORTHO05D007006 1.1e-38 163.3 111 73.0
Cfa019629 Carpinus fangiana HOM05D005755 ORTHO05D007006 1.4e-38 162.9 109 75.2
CANSAT11G0923 Cannabis sativa HOM05D005755 ORTHO05D007006 1.8e-38 162.5 111 73.0
TWI15G0398 Tripterygium wilfordii HOM05D005755 ORTHO05D007006 2.4e-38 162.2 109 71.6
Gohir.A01G133200 Gossypium hirsutum HOM05D005755 ORTHO05D007006 4.0e-38 161.4 112 70.5
Potri.008G044200 Populus trichocarpa HOM05D005755 ORTHO05D007006 4.0e-38 161.4 111 73.0
Glyma.05G164400 Glycine max HOM05D005755 ORTHO05D007006 5.3e-38 161.0 111 71.2
Glyma.08G121800 Glycine max HOM05D005755 ORTHO05D007006 5.3e-38 161.0 111 72.1
Actinidia38859 Actinidia chinensis HOM05D005755 ORTHO05D007006 6.9e-38 160.6 111 70.3
Gorai.002G143500 Gossypium raimondii HOM05D005755 ORTHO05D007006 6.9e-38 160.6 112 69.6
Peaxi162Scf00373g00210 Petunia axillaris HOM05D005755 ORTHO05D007006 6.9e-38 160.6 114 73.7
QL08p056843 Quercus lobata HOM05D005755 ORTHO05D007006 6.9e-38 160.6 108 72.2
HPP92_016041 Vanilla planifolia HOM05D005755 ORTHO05D007006 6.9e-38 160.6 111 70.3
FAN01G0677 Fragaria x ananassa HOM05D005755 ORTHO05D007006 1.2e-37 159.8 111 70.3
MD01G1131200 Malus domestica HOM05D005755 ORTHO05D007006 1.5e-37 159.5 111 70.3
Phvul.002G244400 Phaseolus vulgaris HOM05D005755 ORTHO05D007006 2.6e-37 158.7 111 69.4
PGR142G0594 Punica granatum HOM05D005755 ORTHO05D007006 4.5e-37 157.9 111 70.3
Sed0018161 Sechium edule HOM05D005755 ORTHO05D007006 5.8e-37 157.5 111 68.5
EL10Ac5g11654 Beta vulgaris HOM05D005755 ORTHO05D007006 7.6e-37 157.1 96 82.3
FAN06G3582 Fragaria x ananassa HOM05D005755 ORTHO05D007006 7.6e-37 157.1 109 69.7
TPR.G12499 Trifolium pratense HOM05D005755 ORTHO05D007006 7.6e-37 157.1 109 67.9
CsaV3_3G030820 Cucumis sativus L. HOM05D005755 ORTHO05D007006 9.9e-37 156.8 111 69.4
FAN03G2322 Fragaria x ananassa HOM05D005755 ORTHO05D007006 1.3e-36 156.4 106 71.7
CDE10G1261 Ceratophyllum demersum HOM05D005755 ORTHO05D007006 1.7e-36 156.0 111 67.6
THA.LOC104799357 Tarenaya hassleriana HOM05D005755 ORTHO05D007006 1.7e-36 156.0 111 68.5
Medtr6g068850 Medicago truncatula HOM05D005755 ORTHO05D007006 2.9e-36 155.2 109 66.1
Peaxi162Scf00111g00718 Petunia axillaris HOM05D005755 ORTHO05D007006 2.9e-36 155.2 112 71.4
Lsat_1_v5_gn_2_46180 Lactuca sativa HOM05D005755 ORTHO05D007006 3.8e-36 154.8 111 72.1
Psat1g119080 Pisum sativum HOM05D005755 ORTHO05D007006 3.8e-36 154.8 109 67.0
Sabra08G0030600 Salix brachista HOM05D005755 ORTHO05D007006 3.8e-36 154.8 109 71.6
Aqoxy3G01116 Aquilegia oxysepala HOM05D005755 ORTHO05D007006 4.9e-36 154.5 109 68.8
Lj4g0006534 Lotus japonicus HOM05D005755 ORTHO05D007006 1.4e-35 152.9 111 67.6
Lalb_Chr07g0186081 Lupinus albus HOM05D005755 ORTHO05D007006 1.4e-35 152.9 113 67.3
TWI38G1562 Tripterygium wilfordii HOM05D005755 ORTHO05D007006 1.9e-35 152.5 108 69.4
CSS0044562 Camellia sinensis var. sinensis HOM05D005755 ORTHO05D007006 2.4e-35 152.1 111 69.4
MBI19_g25006_MAGBIO Magnolia biondii HOM05D005755 ORTHO05D007006 5.4e-35 151.0 111 70.3
Potri.010G217300 Populus trichocarpa HOM05D005755 ORTHO05D007006 7.1e-35 150.6 104 73.1
Rhsim09G0154200 Rhododendron simsii HOM05D001639 ORTHO05D004140 7.1e-35 150.6 139 59.7
Cc00_g19060 Coffea canephora HOM05D005755 ORTHO05D007006 1.2e-34 149.8 105 71.4
Gohir.D01G118000 Gossypium hirsutum HOM05D005755 ORTHO05D007006 1.6e-34 149.4 130 60.0
Hma1.2p1_0157F.1_g068960 Hydrangea macrophylla HOM05D005755 ORTHO05D007006 1.6e-34 149.4 109 69.7
ECA238G0308 Erigeron canadensis HOM05D005755 ORTHO05D007006 2.7e-34 148.7 110 68.2
Sopen04g020610 Solanum pennellii HOM05D005755 ORTHO05D007006 4.6e-34 147.9 102 71.6
ATR1096G048 Amborella trichopoda HOM05D005755 ORTHO05D007006 6.0e-34 147.5 106 65.1
CAN.G79.77 Capsicum annuum HOM05D005755 ORTHO05D007006 1.3e-33 146.4 104 69.2
Nitab4.5_0001721g0080 Nicotiana tabacum HOM05D005755 ORTHO05D007006 1.3e-33 146.4 104 69.2
VMungo0251G2378 Vigna mungo HOM05D001210 ORTHO05D001036 1.3e-33 146.4 106 68.9
Aa31LG7G12880 Aethionema arabicum HOM05D005755 ORTHO05D007006 1.8e-33 146.0 110 65.5
Solyc04g049970.4 Solanum lycopersicum HOM05D005755 ORTHO05D007006 2.3e-33 145.6 101 71.3
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 3.9e-33 144.8 101 68.3
Nitab4.5_0000061g0170 Nicotiana tabacum HOM05D005755 ORTHO05D007006 1.1e-32 143.3 102 68.6
Sp6g14210 Schrenkiella parvula HOM05D005755 ORTHO05D007006 1.9e-32 142.5 111 63.1
Sopen07g033930 Solanum pennellii HOM05D005755 ORTHO05D007006 1.9e-32 142.5 104 67.3
PGSC0003DMG400022164 Solanum tuberosum HOM05D005755 ORTHO05D007006 2.5e-32 142.1 104 67.3
Solyc07g065720.4 Solanum lycopersicum HOM05D005755 ORTHO05D007006 3.3e-32 141.7 103 68.0
PSO675G6920 Papaver somniferum HOM05D005755 ORTHO05D007006 4.3e-32 141.4 104 64.4
arahy.Tifrunner.gnm1.ann1.FL0JYU Arachis hypogaea HOM05D005755 ORTHO05D007006 7.4e-32 140.6 113 64.6
arahy.Tifrunner.gnm1.ann1.QA5RE0 Arachis hypogaea HOM05D005755 ORTHO05D007006 7.4e-32 140.6 113 64.6
Thhalv10015092m.g Eutrema salsugineum HOM05D005755 ORTHO05D007006 1.3e-31 139.8 111 62.2
CARHR264900 Cardamine hirsuta HOM05D005755 ORTHO05D007006 1.6e-31 139.4 111 60.4
MSTRG.8164 Avicennia marina HOM05D005755 ORTHO05D007006 2.1e-31 139.0 101 69.3
BcaB08g35550 Brassica carinata HOM05D005755 ORTHO05D007006 2.1e-31 139.0 102 66.7
BraA02t06267Z Brassica rapa HOM05D005755 ORTHO05D007006 2.8e-31 138.7 110 62.7
BraA10t43055Z Brassica rapa HOM05D005755 ORTHO05D007006 6.2e-31 137.5 102 66.7
Oeu017232.1 Olea europaea HOM05D005755 ORTHO05D007006 6.2e-31 137.5 99 68.7
Oeu057236.1 Olea europaea HOM05D005755 ORTHO05D007006 6.2e-31 137.5 99 69.7
BcaC03g14561 Brassica carinata HOM05D005755 ORTHO05D007006 1.4e-30 136.3 102 66.7
A10p09750 Brassica napus HOM05D005755 ORTHO05D007006 1.4e-30 136.3 102 65.7
C02p20090 Brassica napus HOM05D005755 ORTHO05D007006 1.4e-30 136.3 102 66.7
Migut.F01798 Erythranthe guttata HOM05D005755 ORTHO05D007006 1.4e-30 136.3 100 67.0
BolC2t08139H Brassica oleracea HOM05D005755 ORTHO05D007006 1.8e-30 136.0 102 66.7
AT5G51960 Arabidopsis thaliana HOM05D005755 ORTHO05D007006 2.4e-30 135.6 111 60.4
SalBow1G5334 Salvia bowleyana HOM05D005755 ORTHO05D007006 2.4e-30 135.6 98 68.4
SalBow1G7067 Salvia bowleyana HOM05D005755 ORTHO05D007006 2.4e-30 135.6 98 68.4
BcaC04g20616 Brassica carinata HOM05D005755 ORTHO05D007006 6.9e-30 134.0 102 64.7
C09p41470 Brassica napus HOM05D005755 ORTHO05D007006 6.9e-30 134.0 102 64.7
BolC9t57024H Brassica oleracea HOM05D005755 ORTHO05D007006 6.9e-30 134.0 102 64.7
SalBow3G2244 Salvia bowleyana HOM05D005755 ORTHO05D007006 6.9e-30 134.0 98 67.3
SalBow3G3619 Salvia bowleyana HOM05D005755 ORTHO05D007006 6.9e-30 134.0 98 67.3
Carub.0008s1205 Capsella rubella HOM05D005755 ORTHO05D007006 2.6e-29 132.1 109 60.6
AL8G32330 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 7.6e-29 130.6 111 58.6
BcaB05g23952 Brassica carinata HOM05D005755 ORTHO05D007006 9.9e-29 130.2 102 62.7
AL8G26290 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 4.9e-28 127.9 109 57.8
SEGI_41538 Sequoiadendron giganteum HOM05D005755 ORTHO05D007006 1.1e-27 126.7 104 57.7
Os11g0133900 Oryza sativa ssp. japonica HOM05D005755 ORTHO05D007006 1.9e-27 125.9 99 62.6
SGA_v2.0_scaffold71G24037 Striga asiatica HOM05D005755 ORTHO05D007006 1.6e-26 122.9 100 59.0
unitig_8.g3685 Utricularia gibba HOM05D005755 ORTHO05D007006 1.0e-25 120.2 99 65.7
Zm00001eb235420 Zea mays HOM05D005755 ORTHO05D007006 6.7e-25 117.5 101 58.4
Glyma.19G087500 Glycine max HOM05D005755 ORTHO05D007006 5.6e-24 114.4 76 73.7
Zm00001eb163500 Zea mays HOM05D005755 ORTHO05D007006 1.4e-22 109.8 102 55.9
Mapoly0006s0175 Marchantia polymorpha HOM05D005755 ORTHO05D007006 4.5e-21 104.8 99 50.5
SMO207G0003 Selaginella moellendorffii HOM05D005755 ORTHO05D007006 4.5e-21 104.8 98 57.1
Os12g0131266 Oryza sativa ssp. japonica HOM05D005755 ORTHO05D007006 5.8e-21 104.4 83 62.7
TPR.G31353 Trifolium pratense HOM05D005755 ORTHO05D007006 8.4e-20 100.5 65 72.3
Lj3g0006677 Lotus japonicus HOM05D005755 ORTHO05D007006 4.2e-19 98.2 74 62.2
Haze_18895 Corylus avellana HOM05D005755 ORTHO05D007006 5.5e-19 97.8 86 59.3
AagrBONN_evm.TU.Sc2ySwM_362.2659 Anthoceros agrestis HOM05D005755 ORTHO05D007006 9.3e-19 97.1 94 48.9
Lj3g0023846 Lotus japonicus HOM05D005755 ORTHO05D007006 1.6e-15 86.3 73 57.5
HanXRQChr14g0436521 Helianthus annuus HOM05D005755 ORTHO05D007006 1.4e-14 83.2 74 55.4
Pp3c3_10790 Physcomitrium patens HOM05D005755 ORTHO05D007006 1.4e-14 83.2 99 42.4
Oeu057237.1 Olea europaea HOM05D005755 ORTHO05D007006 7.6e-13 77.4 65 58.5
A02p12030 Brassica napus HOM05D005755 ORTHO05D007006 1.1e-11 73.6 74 48.6
Prupe.2G218400 Prunus persica HOM05D005755 ORTHO05D007006 1.4e-11 73.2 117 42.7
AL792U10010 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 2.7e-10 68.9 73 46.6
SEGI_15077 Sequoiadendron giganteum HOM05D002017 ORTHO05D007006 1.5e-08 63.2 65 49.2
ClCG08G001190 Citrullus lanatus HOM05D005755 ORTHO05D007006 1.7e-07 59.7 60 46.7
CBR_g23899 Chara braunii HOM05D005755 ORTHO05D007006 4.1e-06 55.1 96 36.5


User provided reference genes

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