Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc05g0000700 Simmondsia chinensis HOM05D004208 ORTHO05D005156 1.1e-179 633.3 346 100.0
AUR62030125 Chenopodium quinoa HOM05D004208 ORTHO05D005156 2.6e-107 392.9 345 63.2
AUR62038602 Chenopodium quinoa HOM05D004208 ORTHO05D005156 2.2e-106 389.8 345 62.6
TAR636G1466 Trochodendron aralioides HOM05D004208 ORTHO05D005156 2.4e-105 386.3 348 62.1
Dinv34629 Davidia involucrata HOM05D004208 ORTHO05D005156 2.9e-103 379.4 352 59.4
Hma1.2p1_0273F.1_g109690 Hydrangea macrophylla HOM05D004208 ORTHO05D005156 3.8e-103 379.0 349 62.5
Ah.03g147410 Amaranthus hybridus HOM05D004208 ORTHO05D005156 2.1e-101 373.2 344 61.0
Dinv22405 Davidia involucrata HOM05D004208 ORTHO05D005156 3.6e-101 372.5 352 58.0
Gohir.A08G190100 Gossypium hirsutum HOM05D004208 ORTHO05D005156 1.5e-99 367.1 347 59.1
Thecc.01G258100 Theobroma cacao HOM05D004208 ORTHO05D005156 2.0e-99 366.7 348 58.9
Gohir.D08G208600 Gossypium hirsutum HOM05D004208 ORTHO05D005156 2.6e-99 366.3 348 58.3
Gorai.004G221000 Gossypium raimondii HOM05D004208 ORTHO05D005156 2.6e-99 366.3 348 58.3
GSVIVG01028335001 Vitis vinifera HOM05D004208 ORTHO05D005156 3.7e-98 362.5 344 61.9
Lj2A1151T32 Lonicera japonica HOM05D004208 ORTHO05D005156 1.8e-97 360.1 354 57.3
CSS0041954 Camellia sinensis var. sinensis HOM05D004208 ORTHO05D005156 3.1e-97 359.4 352 58.5
TAR362G0204 Trochodendron aralioides HOM05D004208 ORTHO05D005156 1.2e-96 357.5 349 58.5
PGR031G1029 Punica granatum HOM05D004208 ORTHO05D005156 2.3e-95 353.2 349 55.6
Duzib138G0474 Durio zibethinus HOM05D004208 ORTHO05D005156 5.0e-95 352.1 348 56.9
CSS0038412 Camellia sinensis var. sinensis HOM05D004208 ORTHO05D005156 1.1e-94 350.9 352 57.7
COL.COLO4_05893 Corchorus olitorius HOM05D004208 ORTHO05D005156 2.1e-93 346.7 357 55.5
Actinidia25791 Actinidia chinensis HOM05D004208 ORTHO05D005156 8.0e-93 344.7 362 55.0
Duzib133G1203 Durio zibethinus HOM05D004208 ORTHO05D005156 1.0e-92 344.4 348 56.3
Ah.02g120380 Amaranthus hybridus HOM05D004208 ORTHO05D005156 1.4e-92 344.0 344 56.4
Cfa012194 Carpinus fangiana HOM05D004208 ORTHO05D005156 3.0e-92 342.8 328 56.1
Manes.12G032400 Manihot esculenta HOM05D004208 ORTHO05D005156 8.9e-92 341.3 343 56.3
Sopen01g041810 Solanum pennellii HOM05D004208 ORTHO05D005156 1.5e-91 340.5 362 54.4
CiPaw.11G131900 Carya illinoinensis HOM05D004208 ORTHO05D005156 2.6e-91 339.7 328 57.0
CDE03G0182 Ceratophyllum demersum HOM05D004208 ORTHO05D005156 4.4e-91 339.0 341 55.4
Solyc01g098230.3 Solanum lycopersicum HOM05D004208 ORTHO05D005156 5.7e-91 338.6 360 54.4
Actinidia07297 Actinidia chinensis HOM05D004208 ORTHO05D005156 9.8e-91 337.8 353 54.7
EL10Ac7g17258 Beta vulgaris HOM05D004208 ORTHO05D005156 1.7e-90 337.0 323 59.1
CANSAT01G2107 Cannabis sativa HOM05D004208 ORTHO05D005156 2.2e-90 336.7 354 55.1
Prupe.8G223600 Prunus persica HOM05D004208 ORTHO05D005156 1.8e-89 333.6 345 54.5
Atru.chr5.1689 Acer truncatum HOM05D004208 ORTHO05D005156 9.2e-89 331.3 343 57.7
CAN.G134.214 Capsicum annuum HOM05D004208 ORTHO05D005156 2.0e-88 330.1 355 54.1
Haze_08822 Corylus avellana HOM05D004208 ORTHO05D005156 2.9e-87 326.2 357 51.0
Potri.005G224500 Populus trichocarpa HOM05D004208 ORTHO05D005156 3.8e-87 325.9 341 56.3
Nitab4.5_0001165g0160 Nicotiana tabacum HOM05D004208 ORTHO05D005156 1.5e-86 323.9 357 53.2
Sabra05G0173200 Salix brachista HOM05D004208 ORTHO05D005156 1.5e-86 323.9 342 54.7
Sed0003224 Sechium edule HOM05D004208 ORTHO05D005156 2.5e-86 323.2 347 53.3
Peaxi162Scf00225g00519 Petunia axillaris HOM05D004208 ORTHO05D005156 4.3e-86 322.4 371 52.0
Manes.13G034400 Manihot esculenta HOM05D004208 ORTHO05D005156 7.3e-86 321.6 343 52.5
Migut.N01348 Erythranthe guttata HOM05D004208 ORTHO05D005156 1.2e-85 320.9 354 52.5
Migut.O00608 Erythranthe guttata HOM05D004208 ORTHO05D005156 1.6e-85 320.5 354 52.5
Sed0002598 Sechium edule HOM05D004208 ORTHO05D005156 2.8e-85 319.7 343 53.1
Eucgr.B01552 Eucalyptus grandis HOM05D004208 ORTHO05D005156 4.7e-85 318.9 366 51.4
MBI10_g22594_MAGBIO Magnolia biondii HOM05D004208 ORTHO05D005156 4.7e-85 318.9 313 58.8
CsaV3_5G028820 Cucumis sativus L. HOM05D004208 ORTHO05D005156 1.0e-84 317.8 346 52.0
PSO339G3828 Papaver somniferum HOM05D004208 ORTHO05D005156 1.4e-84 317.4 347 53.3
Potri.002G038300 Populus trichocarpa HOM05D004208 ORTHO05D005156 5.2e-84 315.5 345 55.7
AL4G32160 Arabidopsis lyrata HOM05D004208 ORTHO05D005156 6.8e-84 315.1 342 51.5
AL3G53520 Arabidopsis lyrata HOM05D004208 ORTHO05D005156 1.5e-83 313.9 342 50.9
AT2G36070 Arabidopsis thaliana HOM05D004208 ORTHO05D005156 4.4e-83 312.4 342 51.2
Lsat_1_v5_gn_7_79121 Lactuca sativa HOM05D004208 ORTHO05D005156 4.4e-83 312.4 350 53.1
Aa31LG8G17460 Aethionema arabicum HOM05D004208 ORTHO05D005156 5.8e-83 312.0 342 49.4
HanXRQChr16g0512021 Helianthus annuus HOM05D004208 ORTHO05D005156 5.8e-83 312.0 352 53.7
QL12p032241 Quercus lobata HOM05D004208 ORTHO05D005156 7.5e-83 311.6 328 55.2
FAN24G2300 Fragaria x ananassa HOM05D004208 ORTHO05D005156 9.8e-83 311.2 345 50.1
Ciclev10019992m.g Citrus clementina HOM05D004208 ORTHO05D005156 2.2e-82 310.1 343 56.6
FAN20G2986 Fragaria x ananassa HOM05D004208 ORTHO05D005156 2.9e-82 309.7 345 49.9
FAN27G3501 Fragaria x ananassa HOM05D004208 ORTHO05D005156 3.7e-82 309.3 345 49.9
FAN15G2877 Fragaria x ananassa HOM05D004208 ORTHO05D005156 1.4e-81 307.4 345 49.9
FvH4_2g21470 Fragaria vesca HOM05D004208 ORTHO05D005156 1.9e-81 307.0 345 51.9
Cpa.g.sc81.94 Carica papaya HOM05D004208 ORTHO05D005156 4.1e-81 305.8 364 48.6
Glyma.04G107400 Glycine max HOM05D004208 ORTHO05D005156 4.1e-81 305.8 346 53.2
DCAR_005689 Daucus carota HOM05D004208 ORTHO05D005156 1.2e-80 304.3 351 51.0
Nitab4.5_0000245g0150 Nicotiana tabacum HOM05D004208 ORTHO05D005156 1.2e-80 304.3 357 50.7
Cc01_g18340 Coffea canephora HOM05D004208 ORTHO05D005156 1.6e-80 303.9 358 51.4
RcHm_v2.0_Chr6g0288111 Rosa chinensis HOM05D004208 ORTHO05D005156 2.0e-80 303.5 345 51.3
ATR0736G190 Amborella trichopoda HOM05D004208 ORTHO05D005156 3.3e-78 296.2 351 50.1
Carub.0004s1781 Capsella rubella HOM05D004208 ORTHO05D005156 3.3e-78 296.2 342 49.7
SalBow1G3185 Salvia bowleyana HOM05D004208 ORTHO05D005156 3.3e-78 296.2 354 49.2
Phvul.005G002100 Phaseolus vulgaris HOM05D004208 ORTHO05D005156 7.3e-78 295.0 346 52.6
SGA_v2.0_scaffold32G13335 Striga asiatica HOM05D004208 ORTHO05D005156 7.3e-78 295.0 350 51.1
Eucgr.G01944 Eucalyptus grandis HOM05D004208 ORTHO05D005156 2.8e-77 293.1 277 57.0
MSTRG.16949 Avicennia marina HOM05D004208 ORTHO05D005156 6.2e-77 292.0 349 49.0
TWI32G0756 Tripterygium wilfordii HOM05D004208 ORTHO05D005156 6.2e-77 292.0 348 52.0
Sabra02G0030700 Salix brachista HOM05D004208 ORTHO05D005156 1.1e-76 291.2 317 54.9
Oeu042777.2 Olea europaea HOM05D004208 ORTHO05D005156 1.4e-76 290.8 358 49.2
Aqoxy2G03649 Aquilegia oxysepala HOM05D004208 ORTHO05D005156 4.0e-76 289.3 352 48.9
Oeu062471.2 Olea europaea HOM05D004208 ORTHO05D005156 4.0e-76 289.3 356 50.6
Rhsim01G0263600 Rhododendron simsii HOM05D004208 ORTHO05D005156 5.2e-76 288.9 346 52.0
BcaB07g31584 Brassica carinata HOM05D004208 ORTHO05D005156 8.9e-76 288.1 345 49.0
Actinidia09547 Actinidia chinensis HOM05D004208 ORTHO05D005156 2.6e-75 286.6 348 48.9
Thhalv10001977m.g Eutrema salsugineum HOM05D004208 ORTHO05D005156 3.4e-75 286.2 343 47.5
FAN17G2653 Fragaria x ananassa HOM05D004208 ORTHO05D005156 3.4e-75 286.2 343 48.4
FvH4_4g12040 Fragaria vesca HOM05D004208 ORTHO05D005156 4.4e-75 285.8 343 49.6
Nn3g19657 Nelumbo nucifera HOM05D004208 ORTHO05D005156 5.8e-75 285.4 349 52.4
Ca_26001_v3 Cicer arietinum L. HOM05D004208 ORTHO05D005156 6.4e-74 282.0 346 48.8
BraA07t27815Z Brassica rapa HOM05D004208 ORTHO05D005156 1.1e-73 281.2 340 48.5
Sp3g33730 Schrenkiella parvula HOM05D004208 ORTHO05D005156 9.2e-73 278.1 342 47.1
BraA09t36939Z Brassica rapa HOM05D004208 ORTHO05D005156 1.2e-72 277.7 346 47.1
Psat7g228960 Pisum sativum HOM05D004208 ORTHO05D005156 3.5e-72 276.2 341 48.1
AT2G20510 Arabidopsis thaliana HOM05D004208 ORTHO05D005156 7.8e-72 275.0 342 48.5
A09p12940 Brassica napus HOM05D004208 ORTHO05D005156 1.0e-71 274.6 342 48.0
MD05G1197100 Malus domestica HOM05D004208 ORTHO05D005156 2.3e-71 273.5 351 48.1
VMungo1080G0701 Vigna mungo HOM05D004208 ORTHO05D005156 3.0e-71 273.1 346 49.7
A07p00220 Brassica napus HOM05D004208 ORTHO05D005156 3.9e-71 272.7 340 47.9
C09p15320 Brassica napus HOM05D004208 ORTHO05D005156 1.1e-70 271.2 342 47.1
FAN07G0785 Fragaria x ananassa HOM05D004208 ORTHO05D005156 2.5e-70 270.0 374 43.6
Peaxi162Scf00225g00527 Petunia axillaris HOM05D004208 ORTHO05D005156 4.3e-70 269.2 352 47.7
BcaB08g34912 Brassica carinata HOM05D004208 ORTHO05D005156 1.2e-69 267.7 340 45.6
BolC7t40497H Brassica oleracea HOM05D004208 ORTHO05D005156 1.6e-69 267.3 341 48.7
BcaB03g16846 Brassica carinata HOM05D004208 ORTHO05D005156 3.6e-69 266.2 340 46.2
arahy.Tifrunner.gnm1.ann1.W57KUE Arachis hypogaea HOM05D004208 ORTHO05D005156 4.7e-69 265.8 343 48.7
BcaC06g36740 Brassica carinata HOM05D004208 ORTHO05D005156 1.4e-68 264.2 341 48.4
CARHR130310 Cardamine hirsuta HOM05D004208 ORTHO05D005156 5.2e-68 262.3 342 47.7
BolC9t54440H Brassica oleracea HOM05D004208 ORTHO05D005156 8.9e-68 261.5 344 45.9
Carub.0003s3496 Capsella rubella HOM05D004208 ORTHO05D005156 1.5e-67 260.8 340 47.4
BcaC04g22784 Brassica carinata HOM05D004208 ORTHO05D005156 2.0e-67 260.4 342 45.9
SGA_v2.0_scaffold58G20323 Striga asiatica HOM05D004208 ORTHO05D005156 4.4e-67 259.2 265 54.3
SEGI_36648 Sequoiadendron giganteum HOM05D004208 ORTHO05D005156 9.9e-67 258.1 357 45.4
Oeu021968.1 Olea europaea HOM05D004208 ORTHO05D005156 6.4e-66 255.4 431 40.8
Medtr2g083690 Medicago truncatula HOM05D004208 ORTHO05D005156 4.6e-64 249.2 347 44.4
C07p00510 Brassica napus HOM05D004208 ORTHO05D005156 1.0e-63 248.1 340 47.4
Zm00001eb111900 Zea mays HOM05D004208 ORTHO05D005156 1.2e-61 241.1 328 45.4
Peaxi162Scf00118g00111 Petunia axillaris HOM05D004208 ORTHO05D005156 4.7e-61 239.2 285 49.8
TPR.G5025 Trifolium pratense HOM05D004208 ORTHO05D005156 8.1e-61 238.4 282 46.5
Lalb_Chr15g0090311 Lupinus albus HOM05D004208 ORTHO05D005156 1.8e-60 237.3 357 46.2
Nitab4.5_0007798g0030 Nicotiana tabacum HOM05D004208 ORTHO05D005156 1.8e-60 237.3 355 45.6
MELO3C033986.2 Cucumis melo HOM05D004208 ORTHO05D005156 2.4e-60 236.9 445 37.1
RcHm_v2.0_Chr4g0409381 Rosa chinensis HOM05D004208 ORTHO05D005156 2.4e-60 236.9 282 48.9
THA.LOC104805532 Tarenaya hassleriana HOM05D004208 ORTHO05D005156 2.0e-59 233.8 346 45.1
TWI34G1830 Tripterygium wilfordii HOM05D004208 ORTHO05D005156 3.4e-59 233.0 345 44.9
HPP92_012187 Vanilla planifolia HOM05D004208 ORTHO05D005156 1.3e-58 231.1 309 46.0
ECA236G3853 Erigeron canadensis HOM05D004208 ORTHO05D000364 2.9e-58 229.9 340 47.9
Nitab4.5_0001526g0060 Nicotiana tabacum HOM05D004208 ORTHO05D005156 1.1e-57 228.0 285 50.2
CSS0015888 Camellia sinensis var. sinensis HOM05D004208 ORTHO05D005156 3.2e-57 226.5 320 47.5
FAN12G3775 Fragaria x ananassa HOM05D004208 ORTHO05D005156 4.2e-57 226.1 388 39.4
FAN12G0345 Fragaria x ananassa HOM05D004208 ORTHO05D005156 5.4e-57 225.7 388 39.4
Medtr4g075680 Medicago truncatula HOM05D004208 ORTHO05D005156 2.3e-55 220.3 344 41.9
CDE04G1955 Ceratophyllum demersum HOM05D004208 ORTHO05D005156 8.7e-55 218.4 242 50.4
arahy.Tifrunner.gnm1.ann1.M6MGA2 Arachis hypogaea HOM05D004208 ORTHO05D005156 2.8e-53 213.4 343 43.7
Lalb_Chr06g0171071 Lupinus albus HOM05D004208 ORTHO05D005156 2.4e-49 200.3 317 45.7
Os07g0409700 Oryza sativa ssp. japonica HOM05D004208 ORTHO05D005156 2.7e-48 196.8 331 39.9
HanXRQChr10g0294161 Helianthus annuus HOM05D004208 ORTHO05D005156 9.0e-44 181.8 218 48.6
BcaC07g41210 Brassica carinata HOM05D004208 ORTHO05D005156 5.8e-43 179.1 292 39.0
Medtr4g029490 Medicago truncatula HOM05D004208 ORTHO05D005156 2.9e-42 176.8 340 36.5
SHI09778 Sapria himalayana HOM05D004208 ORTHO05D005156 1.0e-39 168.3 268 39.9
SMO353G0191 Selaginella moellendorffii HOM05D004208 ORTHO05D005156 1.5e-38 164.5 299 37.1
CBR_g30902 Chara braunii HOM05D004208 ORTHO05D005156 9.6e-38 161.8 308 32.8
Lj6g0013651 Lotus japonicus HOM05D004208 ORTHO05D005156 1.4e-36 157.9 348 34.5
AagrBONN_evm.TU.Sc2ySwM_344.3623 Anthoceros agrestis HOM05D004208 ORTHO05D005156 5.5e-33 146.0 168 42.3
CAN.G279.25 Capsicum annuum HOM05D004208 ORTHO05D005156 6.7e-31 139.0 235 43.0
Pp3c4_19960 Physcomitrium patens HOM05D004208 ORTHO05D005156 1.8e-28 131.0 172 40.7
Mapoly0070s0010 Marchantia polymorpha HOM05D004208 ORTHO05D005156 5.8e-27 125.9 235 37.0
PGSC0003DMG400022489 Solanum tuberosum HOM05D004208 ORTHO05D005156 2.1e-24 117.5 76 71.1
Rhsim01G0263500 Rhododendron simsii HOM05D004208 ORTHO05D005156 1.9e-22 110.9 112 56.2
Pp3c12_7570 Physcomitrium patens HOM05D004208 ORTHO05D005156 3.3e-22 110.2 214 33.6
ClCG01G005870 Citrullus lanatus HOM05D004208 ORTHO05D005156 5.7e-22 109.4 73 67.1
unitig_746.g26574 Utricularia gibba HOM05D004208 ORTHO05D005156 2.4e-20 104.0 79 62.0
Aqoxy5G04369 Aquilegia oxysepala HOM05D004870 ORTHO05D006061 8.5e-18 95.5 116 50.0
CDE04G1040 Ceratophyllum demersum HOM05D004208 ORTHO05D005156 1.2e-11 75.1 95 48.4
Cre16.g660800 Chlamydomonas reinhardtii HOM05D004208 ORTHO05D005156 2.3e-07 60.8 93 32.3


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