Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc04g0008500 Simmondsia chinensis HOM05D003373 ORTHO05D004419 3.1e-41 171.4 88 100.0
Sc11g0001580 Simmondsia chinensis HOM05D003373 ORTHO05D004419 4.2e-14 81.3 56 67.9
Cc11_g13620 Coffea canephora HOM05D003373 ORTHO05D004419 1.7e-10 69.3 59 54.2
Cc00_g35170 Coffea canephora HOM05D003373 ORTHO05D004419 2.2e-10 68.9 56 57.1
Oeu057174.1 Olea europaea HOM05D003373 ORTHO05D004419 4.8e-10 67.8 56 53.6
Oeu043029.1 Olea europaea HOM05D003373 ORTHO05D004419 4.5e-08 61.2 60 45.0
GSVIVG01020088001 Vitis vinifera HOM05D003373 ORTHO05D004419 5.9e-08 60.8 58 50.0
Glyma.02G022800 Glycine max HOM05D003373 ORTHO05D004419 1.3e-07 59.7 58 51.7
VMungo1215G0200 Vigna mungo HOM05D003373 ORTHO05D004419 1.3e-07 59.7 58 51.7
CSS0018229 Camellia sinensis var. sinensis HOM05D003373 ORTHO05D004419 2.2e-07 58.9 56 51.8
Glyma.01G041300 Glycine max HOM05D003373 ORTHO05D004419 6.5e-07 57.4 58 50.0
MSTRG.2363 Avicennia marina HOM05D003373 ORTHO05D004419 8.5e-07 57.0 64 46.9
CSS0033815 Camellia sinensis var. sinensis HOM05D003373 ORTHO05D004419 1.4e-06 56.2 56 50.0
AUR62026466 Chenopodium quinoa HOM05D003373 ORTHO05D004419 1.4e-06 56.2 62 48.4
Ciclev10031519m.g Citrus clementina HOM05D003373 ORTHO05D004419 1.4e-06 56.2 56 51.8
TPR.G31079 Trifolium pratense HOM05D003373 ORTHO05D004419 1.4e-06 56.2 56 48.2
AUR62026278 Chenopodium quinoa HOM05D003373 ORTHO05D004419 1.9e-06 55.8 62 48.4
Duzib268G0991 Durio zibethinus HOM05D003373 ORTHO05D004419 1.9e-06 55.8 58 46.6
TWI36G0800 Tripterygium wilfordii HOM05D003373 ORTHO05D004419 1.9e-06 55.8 60 46.7
Cpa.g.sc5.285 Carica papaya HOM05D003373 ORTHO05D004419 3.2e-06 55.1 62 50.0
Gohir.D04G137300 Gossypium hirsutum HOM05D003373 ORTHO05D004419 4.2e-06 54.7 58 46.6
Gorai.012G121700 Gossypium raimondii HOM05D003373 ORTHO05D004419 4.2e-06 54.7 58 46.6
Potri.010G034900 Populus trichocarpa HOM05D003373 ORTHO05D004419 4.2e-06 54.7 55 49.1
Sabra10G0029900 Salix brachista HOM05D003373 ORTHO05D004419 4.2e-06 54.7 55 49.1
Medtr5g037960 Medicago truncatula HOM05D003373 ORTHO05D004419 5.5e-06 54.3 49 53.1
Phvul.002G067800 Phaseolus vulgaris HOM05D003373 ORTHO05D004419 5.5e-06 54.3 58 46.6
EL10Ac6g13134 Beta vulgaris HOM05D003373 ORTHO05D004419 7.2e-06 53.9 49 53.1
COL.COLO4_36201 Corchorus olitorius HOM05D003373 ORTHO05D004419 7.2e-06 53.9 58 48.3
Glyma.01G047300 Glycine max HOM05D003373 ORTHO05D004419 7.2e-06 53.9 58 46.6
Glyma.01G122300 Glycine max HOM05D003373 ORTHO05D004419 9.4e-06 53.5 58 46.6


User provided reference genes

Program Settings