Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 1.8e-193 679.1 341 100.0
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 2.9e-135 485.7 339 73.2
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 9.2e-134 480.7 341 72.7
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 1.6e-133 479.9 341 71.8
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 3.0e-132 475.7 339 71.1
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 2.5e-131 472.6 344 71.2
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 2.1e-130 469.5 345 70.4
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 3.6e-130 468.8 338 71.0
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 8.1e-130 467.6 338 69.5
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 1.1e-129 467.2 327 72.8
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.4e-129 466.8 323 72.4
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 2.3e-129 466.1 350 70.0
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 2.3e-129 466.1 393 63.4
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 3.1e-129 465.7 344 69.5
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 4.0e-129 465.3 318 73.0
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 4.0e-129 465.3 340 69.1
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 5.2e-129 464.9 323 72.1
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 6.8e-129 464.5 341 70.7
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 6.8e-129 464.5 300 76.0
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 8.9e-129 464.2 300 76.0
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 1.2e-128 463.8 299 74.2
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 1.5e-128 463.4 347 68.9
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 2.6e-128 462.6 289 76.5
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 2.6e-128 462.6 325 72.6
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 3.4e-128 462.2 283 77.7
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 3.4e-128 462.2 347 68.6
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 5.8e-128 461.5 333 72.1
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 9.9e-128 460.7 342 69.6
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 1.3e-127 460.3 285 76.5
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 1.3e-127 460.3 338 70.7
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 1.3e-127 460.3 326 71.2
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 2.2e-127 459.5 285 77.9
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 3.7e-127 458.8 344 68.3
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 4.9e-127 458.4 301 76.4
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 8.4e-127 457.6 303 74.6
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 1.1e-126 457.2 339 69.3
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 2.1e-125 453.0 327 69.4
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 2.1e-125 453.0 284 75.0
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 2.7e-125 452.6 291 75.9
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 4.6e-125 451.8 323 70.3
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 7.8e-125 451.1 320 70.6
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 1.0e-124 450.7 325 69.5
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 1.3e-124 450.3 354 67.8
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 1.3e-124 450.3 348 68.1
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 3.0e-124 449.1 348 67.5
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 3.9e-124 448.7 297 73.1
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 8.6e-124 447.6 285 77.2
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 1.1e-123 447.2 341 67.2
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 2.5e-123 446.0 314 71.3
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 9.6e-123 444.1 323 69.7
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 1.6e-122 443.4 341 67.4
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 2.1e-122 443.0 310 71.9
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 8.1e-122 441.0 341 67.7
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 1.1e-121 440.7 334 66.5
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 1.4e-121 440.3 344 64.5
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 2.4e-121 439.5 331 68.9
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 5.2e-121 438.3 325 69.2
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 6.8e-121 438.0 326 68.4
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 8.9e-121 437.6 325 68.9
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 1.5e-120 436.8 322 68.6
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 1.5e-120 436.8 311 70.4
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 2.6e-120 436.0 344 64.5
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 3.4e-120 435.6 321 69.2
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 5.8e-120 434.9 321 68.8
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 1.3e-119 433.7 316 70.3
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 1.3e-119 433.7 289 72.0
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 2.2e-119 433.0 325 68.6
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 2.9e-119 432.6 300 71.7
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 2.9e-119 432.6 266 77.1
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 4.9e-119 431.8 285 75.4
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 4.9e-119 431.8 266 77.1
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 1.1e-118 430.6 413 57.9
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 1.4e-118 430.3 285 72.6
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 1.9e-118 429.9 265 77.0
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 5.4e-118 428.3 417 56.8
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 1.6e-117 426.8 343 64.4
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 2.1e-117 426.4 292 73.3
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 4.6e-117 425.2 327 66.4
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 1.0e-116 424.1 323 66.9
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 1.3e-116 423.7 369 62.3
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 5.1e-116 421.8 340 62.6
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 8.7e-116 421.0 383 58.0
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 2.5e-115 419.5 281 72.2
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 2.1e-114 416.4 263 77.6
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 1.1e-110 404.1 323 65.6
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 2.4e-110 402.9 313 67.7
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 3.2e-110 402.5 310 67.4
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 1.5e-107 393.7 337 62.0
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 2.4e-105 386.3 233 79.0
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 6.9e-105 384.8 264 69.3
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 2.7e-101 372.9 328 60.1
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 2.5e-99 366.3 336 59.5
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 5.5e-94 348.6 351 58.4
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 8.2e-90 334.7 306 61.8
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 8.2e-90 334.7 329 51.4
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 1.0e-87 327.8 323 55.1
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 8.5e-87 324.7 262 58.0
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 1.0e-84 317.8 275 60.4
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 4.8e-82 308.9 271 54.2
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 1.7e-79 300.4 281 57.7
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 1.0e-76 291.2 239 56.9
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 1.5e-72 277.3 159 78.6
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 4.4e-67 259.2 233 57.5
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 1.3e-58 231.1 149 73.8
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 3.8e-55 219.5 133 79.7
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 5.0e-55 219.2 135 77.8
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 1.1e-54 218.0 269 43.5
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 3.6e-53 213.0 132 73.5
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 1.8e-52 210.7 287 45.3
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 8.8e-44 181.8 132 61.4
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 8.3e-42 175.3 112 76.8
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 6.6e-31 139.0 331 34.4
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 1.6e-29 134.4 271 33.9
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 2.6e-27 127.1 267 32.2
SEGI_13194 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 3.2e-17 93.6 104 48.1
CARHR029040 Cardamine hirsuta HOM05D004993 ORTHO05D008532 1.7e-15 87.8 99 52.5
Migut.G01033 Erythranthe guttata HOM05D004993 ORTHO05D008532 2.9e-10 70.5 52 57.7


User provided reference genes

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