Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc04g0006490 Simmondsia chinensis HOM05D008456 ORTHO05D010229 6.0e-42 173.7 85 100.0
Hund25068 Selenicereus undatus HOM05D008456 ORTHO05D010229 2.5e-16 88.6 86 57.0
GSVIVG01011903001 Vitis vinifera HOM05D008456 ORTHO05D010229 1.2e-13 79.7 86 58.1
CSS0032252 Camellia sinensis var. sinensis HOM05D008456 ORTHO05D010229 1.5e-13 79.3 73 63.0
SalBow8G1526 Salvia bowleyana HOM05D008456 ORTHO05D010229 2.6e-13 78.6 86 55.8
Lj3C1016G2 Lonicera japonica HOM05D008456 ORTHO05D010229 7.7e-13 77.0 87 59.8
Actinidia16647 Actinidia chinensis HOM05D008456 ORTHO05D010229 1.0e-12 76.6 86 54.7
EL10Ac6g14422 Beta vulgaris HOM05D008456 ORTHO05D010229 1.3e-12 76.3 87 56.3
CiPaw.16G064600 Carya illinoinensis HOM05D008456 ORTHO05D010229 1.3e-12 76.3 89 52.8
Gohir.D13G066900 Gossypium hirsutum HOM05D008456 ORTHO05D010229 2.9e-12 75.1 80 51.2
Solyc05g009460.3 Solanum lycopersicum HOM05D008456 ORTHO05D010229 6.5e-12 73.9 80 51.2
Gorai.013G076200 Gossypium raimondii HOM05D008456 ORTHO05D010229 8.5e-12 73.6 80 50.0
Haze_17475 Corylus avellana HOM05D008456 ORTHO05D010229 1.9e-11 72.4 86 54.7
Manes.14G101800 Manihot esculenta HOM05D008456 ORTHO05D010229 2.5e-11 72.0 89 51.7
Prupe.1G310000 Prunus persica HOM05D008456 ORTHO05D010229 2.5e-11 72.0 79 53.2
Gohir.A13G055200 Gossypium hirsutum HOM05D008456 ORTHO05D010229 4.2e-11 71.2 80 50.0
ECA233G2223 Erigeron canadensis HOM05D008456 ORTHO05D010229 5.5e-11 70.9 47 68.1
Nitab4.5_0003330g0080 Nicotiana tabacum HOM05D008456 ORTHO05D010229 5.5e-11 70.9 59 59.3
Thecc.02G355800 Theobroma cacao HOM05D008456 ORTHO05D010229 5.5e-11 70.9 86 50.0
Gohir.A12G167400 Gossypium hirsutum HOM05D008456 ORTHO05D010229 2.1e-10 68.9 86 46.5
Cc11_g10220 Coffea canephora HOM05D008456 ORTHO05D010229 2.7e-10 68.6 84 56.0
HanXRQChr16g0529291 Helianthus annuus HOM05D008456 ORTHO05D010229 3.6e-10 68.2 71 59.2
arahy.Tifrunner.gnm1.ann1.J0DG7J Arachis hypogaea HOM05D008456 ORTHO05D010229 4.6e-10 67.8 85 48.2
CiPaw.15G084200 Carya illinoinensis HOM05D008456 ORTHO05D010229 4.6e-10 67.8 83 51.8
CsaV3_6G003500 Cucumis sativus L. HOM05D008456 ORTHO05D010229 4.6e-10 67.8 79 50.6
Gohir.D12G170800 Gossypium hirsutum HOM05D008456 ORTHO05D010229 1.0e-09 66.6 86 46.5
Gorai.008G183400 Gossypium raimondii HOM05D008456 ORTHO05D010229 1.0e-09 66.6 86 46.5
MD16G1043600 Malus domestica HOM05D008456 ORTHO05D010229 3.0e-09 65.1 79 51.9
Glyma.10G274651 Glycine max HOM05D008456 ORTHO05D010229 3.9e-09 64.7 83 50.6
vmacro10553 Vaccinium macrocarpon HOM05D008456 ORTHO05D010229 6.7e-09 63.9 69 55.1
Lj6C759T21 Lonicera japonica HOM05D000497 ORTHO05D002300 2.5e-08 62.0 68 52.9
Lj5g0022784 Lotus japonicus HOM05D008456 ORTHO05D010229 3.3e-08 61.6 47 68.1
Migut.E00334 Erythranthe guttata HOM05D008456 ORTHO05D010229 7.4e-08 60.5 82 45.1
FAN22G1960 Fragaria x ananassa HOM05D008456 ORTHO05D010229 7.4e-08 60.5 87 44.8
CSS0026237 Camellia sinensis var. sinensis HOM05D008456 ORTHO05D010229 1.7e-07 59.3 86 48.8
CSS0028970 Camellia sinensis var. sinensis HOM05D008456 ORTHO05D010229 1.7e-07 59.3 86 50.0
Phvul.007G026950 Phaseolus vulgaris HOM05D008456 ORTHO05D010229 1.7e-07 59.3 88 47.7
Oeu014305.1 Olea europaea HOM05D000497 ORTHO05D002300 4.8e-07 57.8 78 46.2
FvH4_4g27490 Fragaria vesca HOM05D008456 ORTHO05D010229 8.2e-07 57.0 87 44.8
Medtr8g023670 Medicago truncatula HOM05D008456 ORTHO05D010229 8.2e-07 57.0 85 48.2
TAR374G1021 Trochodendron aralioides HOM05D008456 ORTHO05D010229 1.4e-06 56.2 79 48.1
FAN12G3215 Fragaria x ananassa HOM05D008456 ORTHO05D010229 1.8e-06 55.8 87 43.7
Aa31sc621G20 Aethionema arabicum HOM05D011059 ORTHO05D010229 3.1e-06 55.1 37 64.9
CARHR061330 Cardamine hirsuta HOM05D011059 ORTHO05D010229 3.1e-06 55.1 44 56.8
Migut.L01069 Erythranthe guttata HOM05D008456 ORTHO05D010229 5.3e-06 54.3 49 57.1
Carub.0002s1507 Capsella rubella HOM05D011059 ORTHO05D010229 6.9e-06 53.9 41 61.0
BraA07t30825Z Brassica rapa HOM05D011059 ORTHO05D010229 9.1e-06 53.5 41 61.0


User provided reference genes

Program Settings